RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 TRAV4A0A0B4J268 109 aa14.03□□□□□ -0.16
POLR2J3-205ENST00000489144 COX7A2P2O60397 106 aa14.03□□□□□ -0.16
POLR2J3-205ENST00000489144 PVRIGQ6DKI7 326 aa14.03□□□□□ -0.16
POLR2J3-205ENST00000489144 PRSS3P2Q8NHM4 247 aa14.03□□□□□ -0.16
POLR2J3-205ENST00000489144 ZNF503Q96F45 646 aa14.03□□□□□ -0.16
POLR2J3-205ENST00000489144 MOB4Q9Y3A3 225 aa14.03□□□□□ -0.16
POLR2J3-205ENST00000489144 H3BTX0 84 aa14.03□□□□□ -0.16
POLR2J3-205ENST00000489144 PYYP10082 97 aa14.03□□□□□ -0.16
POLR2J3-205ENST00000489144 A0A096LNJ9 63 aa14.02□□□□□ -0.16
POLR2J3-205ENST00000489144 LYZP61626 148 aa14.02□□□□□ -0.16
POLR2J3-205ENST00000489144 LRRC75A-AS1Q8N1F1 130 aa14.02□□□□□ -0.16
POLR2J3-205ENST00000489144 THAP8Q8NA92 274 aa14.02□□□□□ -0.16
POLR2J3-205ENST00000489144 PGLYRP4Q96LB8 373 aa14.02□□□□□ -0.16
POLR2J3-205ENST00000489144 IGLV11-55A0A075B6I3 123 aa14.02□□□□□ -0.17
POLR2J3-205ENST00000489144 ASIPP42127 132 aa14.01□□□□□ -0.17
POLR2J3-205ENST00000489144 IGKV1-17P01599 117 aa14.01□□□□□ -0.17
POLR2J3-205ENST00000489144 IGKV2D-26A0A0A0MRZ7 120 aa14□□□□□ -0.17
POLR2J3-205ENST00000489144 LINC00694P0DN24 101 aa14□□□□□ -0.17
POLR2J3-205ENST00000489144 C10orf113Q5VZT2 155 aa14□□□□□ -0.17
POLR2J3-205ENST00000489144 LINC00305Q7Z4B0 112 aa14□□□□□ -0.17
POLR2J3-205ENST00000489144 RPP21Q9H633 154 aaKnown RBP14□□□□□ -0.17
POLR2J3-205ENST00000489144 RBPMS2Q6ZRY4 209 aaKnown RBP14□□□□□ -0.17
POLR2J3-205ENST00000489144 LINC01587Q99440 93 aa14□□□□□ -0.17
POLR2J3-205ENST00000489144 SLC25A2Q9BXI2 301 aa14□□□□□ -0.17
POLR2J3-205ENST00000489144 CT83Q5H943 113 aa13.99□□□□□ -0.17
POLR2J3-205ENST00000489144 TTTY13Q9BZ97 58 aa13.99□□□□□ -0.17
POLR2J3-205ENST00000489144 KLF12Q9Y4X4 402 aa13.99□□□□□ -0.17
POLR2J3-205ENST00000489144 A6NDX4 124 aa13.99□□□□□ -0.17
POLR2J3-205ENST00000489144 F8W735 103 aaPredicted RBP13.99□□□□□ -0.17
POLR2J3-205ENST00000489144 OR10J6PQ8NGY7 276 aa13.99□□□□□ -0.17
POLR2J3-205ENST00000489144 C15orf32Q32M92 178 aa13.98□□□□□ -0.17
POLR2J3-205ENST00000489144 FAM106AQ4KMX7 169 aa13.98□□□□□ -0.17
POLR2J3-205ENST00000489144 CRLF1O75462 422 aa13.98□□□□□ -0.17
POLR2J3-205ENST00000489144 RPL7P18124 248 aaKnown RBP13.98□□□□□ -0.17
POLR2J3-205ENST00000489144 TMEM158Q8WZ71 300 aa13.98□□□□□ -0.17
POLR2J3-205ENST00000489144 TRGV9Q99603 122 aa13.98□□□□□ -0.17
POLR2J3-205ENST00000489144 FAM167A-AS1Q96KT0 104 aa13.97□□□□□ -0.17
POLR2J3-205ENST00000489144 GFRA4Q9GZZ7 299 aa13.97□□□□□ -0.17
POLR2J3-205ENST00000489144 SETD2Q9BYW2 2564 aaPredicted RBP13.97□□□□□ -0.17
POLR2J3-205ENST00000489144 MFAP4P55083 255 aa13.97□□□□□ -0.17
POLR2J3-205ENST00000489144 MORN3Q6PF18 240 aaPredicted RBP13.97□□□□□ -0.17
POLR2J3-205ENST00000489144 IFI27L1Q96BM0 104 aa13.97□□□□□ -0.17
POLR2J3-205ENST00000489144 PRSS22Q9GZN4 317 aa13.97□□□□□ -0.17
POLR2J3-205ENST00000489144 C21orf62Q9NYP8 219 aa13.97□□□□□ -0.17
POLR2J3-205ENST00000489144 DKK2Q9UBU2 259 aa13.97□□□□□ -0.17
POLR2J3-205ENST00000489144 LOC107984640A0A0U1RRK4 108 aa13.96□□□□□ -0.17
POLR2J3-205ENST00000489144 HAX1O00165 279 aa13.96□□□□□ -0.17
POLR2J3-205ENST00000489144 FAM19A5Q7Z5A7 132 aaPredicted RBP13.96□□□□□ -0.17
POLR2J3-205ENST00000489144 OTOGQ6ZRI0 2925 aa13.96□□□□□ -0.17
POLR2J3-205ENST00000489144 ZNF329Q86UD4 541 aa13.96□□□□□ -0.17
POLR2J3-205ENST00000489144 TRAV41A0A0B4J266 112 aa13.95□□□□□ -0.18
POLR2J3-205ENST00000489144 IL4P05112 153 aa13.95□□□□□ -0.18
POLR2J3-205ENST00000489144 C8orf88P0DMB2 117 aa13.95□□□□□ -0.18
POLR2J3-205ENST00000489144 HLA-DRB4P13762 266 aa13.95□□□□□ -0.18
POLR2J3-205ENST00000489144 PSMB2P49721 201 aa13.95□□□□□ -0.18
POLR2J3-205ENST00000489144 UBE2L3P68036 154 aaKnown RBP13.95□□□□□ -0.18
POLR2J3-205ENST00000489144 C10orf99Q6UWK7 81 aa13.95□□□□□ -0.18
POLR2J3-205ENST00000489144 HLA-DRB4X5D2U9 266 aa13.95□□□□□ -0.18
POLR2J3-205ENST00000489144 PEX7O00628 323 aa13.95□□□□□ -0.18
POLR2J3-205ENST00000489144 IFI27P40305 119 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-205ENST00000489144 SBSPONQ8IVN8 264 aa13.95□□□□□ -0.18
POLR2J3-205ENST00000489144 FAM110DQ8TAY7 271 aaPredicted RBP13.95□□□□□ -0.18
POLR2J3-205ENST00000489144 J3QLI3 93 aa13.94□□□□□ -0.18
POLR2J3-205ENST00000489144 HHLA3Q9XRX5 114 aa13.94□□□□□ -0.18
POLR2J3-205ENST00000489144 A8MWV9 139 aa13.94□□□□□ -0.18
POLR2J3-205ENST00000489144 HOXA3O43365 443 aaPredicted RBP13.94□□□□□ -0.18
POLR2J3-205ENST00000489144 CLEC19AQ6UXS0 136 aa13.94□□□□□ -0.18
POLR2J3-205ENST00000489144 C3orf56Q8N813 242 aa13.94□□□□□ -0.18
POLR2J3-205ENST00000489144 IGHV3-11P01762 117 aa13.93□□□□□ -0.18
POLR2J3-205ENST00000489144 HIST2H2BDQ6DRA6 164 aa13.93□□□□□ -0.18
POLR2J3-205ENST00000489144 SMR3AQ99954 134 aa13.93□□□□□ -0.18
POLR2J3-205ENST00000489144 KLK15Q9H2R5 256 aa13.93□□□□□ -0.18
POLR2J3-205ENST00000489144 P01737 135 aa13.93□□□□□ -0.18
POLR2J3-205ENST00000489144 HBDP02042 147 aa13.93□□□□□ -0.18
POLR2J3-205ENST00000489144 Q6ZQT7 251 aa13.93□□□□□ -0.18
POLR2J3-205ENST00000489144 OR1L4Q8NGR5 311 aa13.93□□□□□ -0.18
POLR2J3-205ENST00000489144 HIST1H4GQ99525 98 aa13.93□□□□□ -0.18
POLR2J3-205ENST00000489144 PAXXQ9BUH6 204 aa13.93□□□□□ -0.18
POLR2J3-205ENST00000489144 J3KT08 172 aa13.92□□□□□ -0.18
POLR2J3-205ENST00000489144 IGHV3OR16-13A0A075B7E8 117 aa13.92□□□□□ -0.18
POLR2J3-205ENST00000489144 IGHV3-74A0A0B4J1X5 117 aa13.92□□□□□ -0.18
POLR2J3-205ENST00000489144 C9JAW5 83 aa13.92□□□□□ -0.18
POLR2J3-205ENST00000489144 CCDC140Q96MF4 163 aa13.92□□□□□ -0.18
POLR2J3-205ENST00000489144 ZMAT4Q9H898 229 aa13.92□□□□□ -0.18
POLR2J3-205ENST00000489144 HIGD1AQ9Y241 93 aa13.92□□□□□ -0.18
POLR2J3-205ENST00000489144 ANK3Q12955 4377 aaKnown RBP13.92□□□□□ -0.18
POLR2J3-205ENST00000489144 CTSGP08311 255 aa13.91□□□□□ -0.18
POLR2J3-205ENST00000489144 OR13C6PQ8NH95 151 aa13.91□□□□□ -0.18
POLR2J3-205ENST00000489144 IGHV3-49A0A0A0MS15 119 aa13.91□□□□□ -0.18
POLR2J3-205ENST00000489144 FSHBP01225 129 aa13.91□□□□□ -0.18
POLR2J3-205ENST00000489144 TRBV12-3P01733 135 aa13.91□□□□□ -0.18
POLR2J3-205ENST00000489144 TRGV3P03979 118 aa13.91□□□□□ -0.18
POLR2J3-205ENST00000489144 ANKRD29Q8N6D5 301 aa13.91□□□□□ -0.18
POLR2J3-205ENST00000489144 ZNF491Q8N8L2 437 aa13.91□□□□□ -0.18
POLR2J3-205ENST00000489144 RNF125Q96EQ8 232 aa13.91□□□□□ -0.18
POLR2J3-205ENST00000489144 SLC25A39Q9BZJ4 359 aaPredicted RBP13.91□□□□□ -0.18
POLR2J3-205ENST00000489144 IGHV3-66A0A0C4DH42 116 aa13.9□□□□□ -0.18
POLR2J3-205ENST00000489144 LINC00322Q6ZN03 302 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-205ENST00000489144 SGK494Q96LW2 274 aa13.9□□□□□ -0.18
POLR2J3-205ENST00000489144 WI2-2373I1.2A0A1W2PRP0 233 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms