RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ZNF80P51504 273 aaPredicted RBP10.37□□□□□ -0.75
USP48-210ENST00000489108 ODF1Q14990 250 aa10.37□□□□□ -0.75
USP48-210ENST00000489108 C14orf178Q8N769 122 aaPredicted RBP10.37□□□□□ -0.75
USP48-210ENST00000489108 OR5C1Q8NGR4 320 aa10.37□□□□□ -0.75
USP48-210ENST00000489108 SGK494Q96LW2 274 aa10.37□□□□□ -0.75
USP48-210ENST00000489108 A0A0D9SG52 128 aa10.36□□□□□ -0.75
USP48-210ENST00000489108 CENPXA8MT69 81 aa10.36□□□□□ -0.75
USP48-210ENST00000489108 RNASE3P12724 160 aaKnown RBP10.36□□□□□ -0.75
USP48-210ENST00000489108 FGF8P55075 233 aaPredicted RBP10.36□□□□□ -0.75
USP48-210ENST00000489108 ELOBQ15370 118 aa10.36□□□□□ -0.75
USP48-210ENST00000489108 ZFP2Q6ZN57 461 aa10.36□□□□□ -0.75
USP48-210ENST00000489108 TMEM75Q8N9X5 138 aa10.36□□□□□ -0.75
USP48-210ENST00000489108 LINC00479Q96M42 142 aa10.36□□□□□ -0.75
USP48-210ENST00000489108 SEC22CQ9BRL7 303 aa10.36□□□□□ -0.75
USP48-210ENST00000489108 MBD2Q9UBB5 411 aa10.36□□□□□ -0.75
USP48-210ENST00000489108 A0A087WX48 190 aa10.35□□□□□ -0.75
USP48-210ENST00000489108 TAAR5O14804 337 aa10.35□□□□□ -0.75
USP48-210ENST00000489108 PRSS1P07477 247 aa10.35□□□□□ -0.75
USP48-210ENST00000489108 Q0VG73 95 aa10.35□□□□□ -0.75
USP48-210ENST00000489108 CNPY1Q3B7I2 92 aa10.35□□□□□ -0.75
USP48-210ENST00000489108 FFAR4Q5NUL3 377 aa10.35□□□□□ -0.75
USP48-210ENST00000489108 C9orf163Q8N9P6 203 aa10.35□□□□□ -0.75
USP48-210ENST00000489108 OR10G9Q8NGN4 311 aa10.35□□□□□ -0.75
USP48-210ENST00000489108 C1orf43Q9BWL3 253 aa10.35□□□□□ -0.75
USP48-210ENST00000489108 WDR61Q9GZS3 305 aaKnown RBP10.35□□□□□ -0.75
USP48-210ENST00000489108 JPT2Q9H910 190 aa10.35□□□□□ -0.75
USP48-210ENST00000489108 A8MWV9 139 aa10.34□□□□□ -0.75
USP48-210ENST00000489108 USP17L23D6RBM5 183 aa10.34□□□□□ -0.75
USP48-210ENST00000489108 GNG5P63218 68 aa10.34□□□□□ -0.75
USP48-210ENST00000489108 LGALSLQ3ZCW2 172 aaPredicted RBP10.34□□□□□ -0.75
USP48-210ENST00000489108 KHDC3LQ587J8 217 aa10.34□□□□□ -0.75
USP48-210ENST00000489108 FAM74A1Q5RGS3 127 aa10.34□□□□□ -0.75
USP48-210ENST00000489108 DGAT2L7PQ6IED9 249 aa10.34□□□□□ -0.75
USP48-210ENST00000489108 ENHOQ6UWT2 76 aa10.34□□□□□ -0.75
USP48-210ENST00000489108 KCNIP2Q9NS61 270 aa10.34□□□□□ -0.75
USP48-210ENST00000489108 DMRTA1Q5VZB9 504 aa10.33□□□□□ -0.76
USP48-210ENST00000489108 UFSP1Q6NVU6 142 aa10.33□□□□□ -0.76
USP48-210ENST00000489108 SDIM1Q6ZPB5 146 aa10.33□□□□□ -0.76
USP48-210ENST00000489108 SDHCQ99643 169 aaPredicted RBP10.33□□□□□ -0.76
USP48-210ENST00000489108 CHCHD7Q9BUK0 85 aa10.33□□□□□ -0.76
USP48-210ENST00000489108 TRAV6A0A075B6T7 132 aa10.32□□□□□ -0.76
USP48-210ENST00000489108 C17orf112F2Z3M2 114 aa10.32□□□□□ -0.76
USP48-210ENST00000489108 GCGP01275 180 aa10.32□□□□□ -0.76
USP48-210ENST00000489108 TAS2R45P59539 299 aa10.32□□□□□ -0.76
USP48-210ENST00000489108 KCNIP4Q6PIL6 250 aa10.32□□□□□ -0.76
USP48-210ENST00000489108 ARL6IP6Q8N6S5 226 aa10.32□□□□□ -0.76
USP48-210ENST00000489108 ZC2HC1AQ96GY0 325 aa10.32□□□□□ -0.76
USP48-210ENST00000489108 NDFIP1Q9BT67 221 aa10.32□□□□□ -0.76
USP48-210ENST00000489108 DPH3P1Q9H4G8 78 aa10.32□□□□□ -0.76
USP48-210ENST00000489108 TMEM262E9PQX1 116 aa10.31□□□□□ -0.76
USP48-210ENST00000489108 GAS8-AS1O95177 125 aa10.31□□□□□ -0.76
USP48-210ENST00000489108 HLA-DQA1P01909 254 aa10.3□□□□□ -0.76
USP48-210ENST00000489108 HSD17B11Q8NBQ5 300 aa10.3□□□□□ -0.76
USP48-210ENST00000489108 OR2G3Q8NGZ4 309 aa10.3□□□□□ -0.76
USP48-210ENST00000489108 TCRBP04435 133 aa10.29□□□□□ -0.76
USP48-210ENST00000489108 PIK3CD-AS1Q5SR53 167 aa10.29□□□□□ -0.76
USP48-210ENST00000489108 C15orf54Q8N8G6 183 aa10.29□□□□□ -0.76
USP48-210ENST00000489108 DPH3Q96FX2 82 aa10.29□□□□□ -0.76
USP48-210ENST00000489108 LINC01600Q96MT4 127 aa10.29□□□□□ -0.76
USP48-210ENST00000489108 PLA2G10O15496 165 aa10.28□□□□□ -0.76
USP48-210ENST00000489108 CRPP02741 224 aa10.28□□□□□ -0.76
USP48-210ENST00000489108 S100A4P26447 101 aaKnown RBP10.28□□□□□ -0.76
USP48-210ENST00000489108 OR10G7Q8NGN6 311 aa10.28□□□□□ -0.76
USP48-210ENST00000489108 OR5AC2Q9NZP5 309 aa10.28□□□□□ -0.76
USP48-210ENST00000489108 PSG8Q9UQ74 426 aa10.28□□□□□ -0.76
USP48-210ENST00000489108 IGKV3D-20A0A0C4DH25 116 aa10.27□□□□□ -0.77
USP48-210ENST00000489108 IL7P13232 177 aa10.27□□□□□ -0.77
USP48-210ENST00000489108 RPL19P84098 196 aaKnown RBP10.27□□□□□ -0.77
USP48-210ENST00000489108 CIRBPQ14011 172 aaKnown RBP10.27□□□□□ -0.77
USP48-210ENST00000489108 SMUG1Q53HV7 270 aa10.27□□□□□ -0.77
USP48-210ENST00000489108 FAM74A4Q5TZK3 123 aa10.26□□□□□ -0.77
USP48-210ENST00000489108 A0A087WYN8 130 aa10.25□□□□□ -0.77
USP48-210ENST00000489108 CCDC160A6NGH7 325 aa10.25□□□□□ -0.77
USP48-210ENST00000489108 H0YIZ8 118 aa10.25□□□□□ -0.77
USP48-210ENST00000489108 LYRM1O43325 122 aa10.25□□□□□ -0.77
USP48-210ENST00000489108 ANGP03950 147 aaKnown RBP10.25□□□□□ -0.77
USP48-210ENST00000489108 TCRAP04437 139 aa10.25□□□□□ -0.77
USP48-210ENST00000489108 MPV17L2Q567V2 206 aa10.25□□□□□ -0.77
USP48-210ENST00000489108 PQLC2Q6ZP29 291 aa10.25□□□□□ -0.77
USP48-210ENST00000489108 PRNTQ86SH4 94 aa10.25□□□□□ -0.77
USP48-210ENST00000489108 NUDT15Q9NV35 164 aa10.25□□□□□ -0.77
USP48-210ENST00000489108 A0A087WWL8 130 aa10.24□□□□□ -0.77
USP48-210ENST00000489108 SERTM2A0A1B0GWG4 89 aa10.24□□□□□ -0.77
USP48-210ENST00000489108 RHODO00212 210 aa10.24□□□□□ -0.77
USP48-210ENST00000489108 HMGB3O15347 200 aaKnown RBP10.24□□□□□ -0.77
USP48-210ENST00000489108 ZFP69Q49AA0 526 aa10.24□□□□□ -0.77
USP48-210ENST00000489108 A0A1W2PPV4 95 aa10.23□□□□□ -0.77
USP48-210ENST00000489108 PHOX2AO14813 284 aa10.23□□□□□ -0.77
USP48-210ENST00000489108 SIX6O95475 246 aa10.23□□□□□ -0.77
USP48-210ENST00000489108 H2AFB2P0C5Z0 115 aa10.23□□□□□ -0.77
USP48-210ENST00000489108 CHTF8P0CG12 524 aa10.23□□□□□ -0.77
USP48-210ENST00000489108 UBE2D3P61077 147 aa10.23□□□□□ -0.77
USP48-210ENST00000489108 UBE2D2P62837 147 aa10.23□□□□□ -0.77
USP48-210ENST00000489108 FLI1Q01543 452 aaPredicted RBP10.23□□□□□ -0.77
USP48-210ENST00000489108 MIAQ16674 131 aa10.23□□□□□ -0.77
USP48-210ENST00000489108 LRRC37A5PQ49AS3 106 aa10.23□□□□□ -0.77
USP48-210ENST00000489108 KRTAP26-1Q6PEX3 210 aa10.23□□□□□ -0.77
USP48-210ENST00000489108 SCGB1C1Q8TD33 95 aa10.23□□□□□ -0.77
USP48-210ENST00000489108 IL36BQ9NZH7 164 aa10.23□□□□□ -0.77
USP48-210ENST00000489108 TRBV6-8A0A0A6YYG3 113 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 1722.8 ms