RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 IGFL4Q6B9Z1 124 aa6.87□□□□□ -1.31
TMEM39A-208ENST00000486159 OR8A1Q8NGG7 326 aa6.87□□□□□ -1.31
TMEM39A-208ENST00000486159 TMEM18Q96B42 140 aa6.87□□□□□ -1.31
TMEM39A-208ENST00000486159 PGLYRP4Q96LB8 373 aa6.87□□□□□ -1.31
TMEM39A-208ENST00000486159 ODF3Q96PU9 254 aa6.87□□□□□ -1.31
TMEM39A-208ENST00000486159 SPRY2O43597 315 aa6.86□□□□□ -1.31
TMEM39A-208ENST00000486159 SPINK4O60575 86 aa6.86□□□□□ -1.31
TMEM39A-208ENST00000486159 CTRLP40313 264 aa6.86□□□□□ -1.31
TMEM39A-208ENST00000486159 TFPI2P48307 235 aa6.86□□□□□ -1.31
TMEM39A-208ENST00000486159 ERCC8Q13216 396 aa6.86□□□□□ -1.31
TMEM39A-208ENST00000486159 Q8TAT8 98 aa6.86□□□□□ -1.31
TMEM39A-208ENST00000486159 DCANP1Q8TF63 244 aa6.86□□□□□ -1.31
TMEM39A-208ENST00000486159 C20orf173Q96LM9 149 aa6.86□□□□□ -1.31
TMEM39A-208ENST00000486159 VPS13DQ5THJ4 4388 aa6.86□□□□□ -1.31
TMEM39A-208ENST00000486159 TRAV25A0A0B4J276 109 aa6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 TRAV21A0A0B4J279 112 aa6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 K7EQG2 157 aa6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 DUSP14O95147 198 aaKnown RBP6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 ORM1P02763 201 aa6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 IGLC6P0CF74 106 aa6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 CAMPP49913 170 aa6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 ZNF493Q6ZR52 646 aa6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 BAGE3Q86Y29 109 aa6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 FER1L6-AS1Q8NA97 138 aa6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 FAM19A4Q96LR4 140 aa6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 HIST1H2BLQ99880 126 aa6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 CNFNQ9BYD5 112 aa6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 MS4A6AQ9H2W1 248 aa6.85□□□□□ -1.31
TMEM39A-208ENST00000486159 IFITM10A6NMD0 228 aa6.84□□□□□ -1.31
TMEM39A-208ENST00000486159 LEPP41159 167 aa6.84□□□□□ -1.31
TMEM39A-208ENST00000486159 ZNF80P51504 273 aaPredicted RBP6.84□□□□□ -1.31
TMEM39A-208ENST00000486159 CEMP1Q6PRD7 247 aaPredicted RBP6.84□□□□□ -1.31
TMEM39A-208ENST00000486159 WFDC3Q8IUB2 231 aa6.84□□□□□ -1.31
TMEM39A-208ENST00000486159 RNF183Q96D59 192 aa6.84□□□□□ -1.31
TMEM39A-208ENST00000486159 SPAG8Q99932 426 aaPredicted RBP6.84□□□□□ -1.31
TMEM39A-208ENST00000486159 DEFB4AO15263 64 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 AMBPP02760 352 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 MED14OSP0DP75 135 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 GZMBP10144 247 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 FABP4P15090 132 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 TSPOP30536 169 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 SRIP30626 198 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 CACNG7P62955 275 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 SLAQ13239 276 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 GDF5OSQ5U4N7 250 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 GFI1BQ5VTD9 330 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 EBLN2Q6P2I7 272 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 LYZL1Q6UWQ5 148 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 ZFAND2AQ8N6M9 145 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 OR10D4PQ8NGN7 298 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 C12orf57Q99622 126 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 ALKBH7Q9BT30 221 aaPredicted RBP6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 MAP6D1Q9H9H5 199 aa6.83□□□□□ -1.32
TMEM39A-208ENST00000486159 IGHV4-4A0A075B6R2 117 aa6.82□□□□□ -1.32
TMEM39A-208ENST00000486159 GPX1P07203 203 aa6.82□□□□□ -1.32
TMEM39A-208ENST00000486159 OR5AL1P0C617 328 aa6.82□□□□□ -1.32
TMEM39A-208ENST00000486159 ARMS2P0C7Q2 107 aa6.82□□□□□ -1.32
TMEM39A-208ENST00000486159 APOC4P55056 127 aa6.82□□□□□ -1.32
TMEM39A-208ENST00000486159 CMC4P56277 68 aaPredicted RBP6.82□□□□□ -1.32
TMEM39A-208ENST00000486159 NANOS2P60321 138 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-208ENST00000486159 FOXI2Q6ZQN5 318 aa6.82□□□□□ -1.32
TMEM39A-208ENST00000486159 Q6ZWC4 215 aa6.82□□□□□ -1.32
TMEM39A-208ENST00000486159 A0A0J9YX75 114 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 GRIFINA4D1Z8 144 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 KLLNB2CW77 178 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 SNAI2O43623 268 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 SERF1AO75920 110 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 PPBPP02775 128 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 RAB4AP20338 218 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 PMCHP20382 165 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 KIAA1644Q3SXP7 199 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 PDZD11Q5EBL8 140 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 CDPF1Q6NVV7 123 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 SMIM15Q7Z3B0 74 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 C18orf32Q8TCD1 76 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 PHLDA1Q8WV24 401 aaPredicted RBP6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 CHCHD1Q96BP2 118 aaKnown RBP6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 KCNS1Q96KK3 526 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 TMEM191AQ9H0A3 160 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 TP53TG1Q9Y2A0 90 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 LAMTOR2Q9Y2Q5 125 aa6.81□□□□□ -1.32
TMEM39A-208ENST00000486159 TMSB15BA0A087X1C1 80 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 IGKV3D-20A0A0C4DH25 116 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 OR4C46A6NHA9 309 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 A8MTW9 85 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 S100A12P80511 92 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 JOSD1Q15040 202 aaPredicted RBP6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 TWIST1Q15672 202 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 PSMG4Q5JS54 123 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 FAM104BQ5XKR9 115 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 TMEM256Q8N2U0 113 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 CLUHP3Q96NS8 147 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 TPPP3Q9BW30 176 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 SAMD10Q9BYL1 202 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 CSTL1Q9H114 145 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 TP53TG3Q9ULZ0 132 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 AGRNO00468 2067 aa6.8□□□□□ -1.32
TMEM39A-208ENST00000486159 KIR2DL5BA0A0G2JN68 375 aa6.79□□□□□ -1.32
TMEM39A-208ENST00000486159 KIR2DL5BA0A0G2JPC4 375 aa6.79□□□□□ -1.32
TMEM39A-208ENST00000486159 NUPR2A6NF83 97 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms