RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SMIM15Q7Z3B0 74 aa5.15□□□□□ -1.58
BRCA1-216ENST00000484087 HIST1H2BLQ99880 126 aa5.15□□□□□ -1.58
BRCA1-216ENST00000484087 KRTAP17-1Q9BYP8 105 aa5.15□□□□□ -1.58
BRCA1-216ENST00000484087 LOC102724200A0A096LPH7 203 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-216ENST00000484087 ZNF688P0C7X2 276 aa5.14□□□□□ -1.59
BRCA1-216ENST00000484087 ZNF705DP0CH99 300 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-216ENST00000484087 ZNF705BP0CI00 300 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-216ENST00000484087 ESDP10768 282 aa5.14□□□□□ -1.59
BRCA1-216ENST00000484087 S100A4P26447 101 aaKnown RBP5.14□□□□□ -1.59
BRCA1-216ENST00000484087 TSPOP30536 169 aa5.14□□□□□ -1.59
BRCA1-216ENST00000484087 TWIST1Q15672 202 aa5.14□□□□□ -1.59
BRCA1-216ENST00000484087 GDF5OSQ5U4N7 250 aa5.14□□□□□ -1.59
BRCA1-216ENST00000484087 GATD1Q8NB37 220 aa5.14□□□□□ -1.59
BRCA1-216ENST00000484087 ODF3Q96PU9 254 aa5.14□□□□□ -1.59
BRCA1-216ENST00000484087 ALKBH7Q9BT30 221 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-216ENST00000484087 IFITM10A6NMD0 228 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 F6UB75 175 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 J3KRW8 73 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 HSBP1O75506 76 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 SERF1AO75920 110 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 AMBPP02760 352 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 CD7P09564 240 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 IGLC6P0CF74 106 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 CACNG7P62955 275 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 CD300EQ496F6 205 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-216ENST00000484087 ZNF493Q6ZR52 646 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 SBSPONQ8IVN8 264 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 TMEM256Q8N2U0 113 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 ZFAND2AQ8N6M9 145 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 C18orf32Q8TCD1 76 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 KCNS1Q96KK3 526 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 B9D2Q9BPU9 175 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 KRTAP4-5Q9BYR2 181 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 NAGKQ9UJ70 344 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 STARD9Q9P2P6 4700 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 RYR3Q15413 4870 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 DNAH7Q8WXX0 4024 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 STAB2Q8WWQ8 2551 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 TRAV25A0A0B4J276 109 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 IGKV3D-20A0A0C4DH25 116 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 A0A0J9YX75 114 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 OR4C46A6NHA9 309 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 OR5AL1P0C617 328 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 IGHV4-30-4P0DP06 118 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 NTF3P20783 257 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 RNASE4P34096 147 aaKnown RBP5.13□□□□□ -1.59
BRCA1-216ENST00000484087 ASIPP42127 132 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 AMTP48728 403 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 INSL3P51460 131 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 SSTP61278 116 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 SPANXN1Q5VSR9 72 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 FAM159AQ6UWV7 190 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 FOXI2Q6ZQN5 318 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 APRG1Q8IVJ8 170 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 FAM19A4Q96LR4 140 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 CNFNQ9BYD5 112 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 RETNQ9HD89 108 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 NIT2Q9NQR4 276 aa5.13□□□□□ -1.59
BRCA1-216ENST00000484087 CSMD3Q7Z407 3707 aa5.12□□□□□ -1.59
BRCA1-216ENST00000484087 PPBPP02775 128 aa5.12□□□□□ -1.59
BRCA1-216ENST00000484087 MED14OSP0DP75 135 aa5.12□□□□□ -1.59
BRCA1-216ENST00000484087 CDKN1BP46527 198 aa5.12□□□□□ -1.59
BRCA1-216ENST00000484087 CMC4P56277 68 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-216ENST00000484087 S100A12P80511 92 aa5.12□□□□□ -1.59
BRCA1-216ENST00000484087 DNLZQ5SXM8 178 aa5.12□□□□□ -1.59
BRCA1-216ENST00000484087 FAM104BQ5XKR9 115 aa5.12□□□□□ -1.59
BRCA1-216ENST00000484087 RNASEKQ6P5S7 137 aaKnown RBP5.12□□□□□ -1.59
BRCA1-216ENST00000484087 TMEM61Q8N0U2 210 aa5.12□□□□□ -1.59
BRCA1-216ENST00000484087 ORMDL3Q8N138 153 aa5.12□□□□□ -1.59
BRCA1-216ENST00000484087 CHCHD1Q96BP2 118 aaKnown RBP5.12□□□□□ -1.59
BRCA1-216ENST00000484087 SPAG8Q99932 426 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-216ENST00000484087 TMEM191AQ9H0A3 160 aa5.12□□□□□ -1.59
BRCA1-216ENST00000484087 SIGLEC8Q9NYZ4 499 aa5.12□□□□□ -1.59
BRCA1-216ENST00000484087 TP53TG3Q9ULZ0 132 aa5.12□□□□□ -1.59
BRCA1-216ENST00000484087 NBEAL2Q6ZNJ1 2754 aa5.12□□□□□ -1.59
BRCA1-216ENST00000484087 C7orf71A4D174 169 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 KLLNB2CW77 178 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 H3BVH4 76 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 SNAI2O43623 268 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 NUPR1O60356 82 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 ZNF324O75467 553 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-216ENST00000484087 LINC00614P0C842 121 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 RAB4AP20338 218 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 PMCHP20382 165 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 CKS2P33552 79 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 DEFB131AP59861 70 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 DEFB1P60022 68 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 JOSD1Q15040 202 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-216ENST00000484087 IQCJQ1A5X6 159 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 DEFB114Q30KQ6 69 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 ANXA2RQ3ZCQ2 193 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 PYY3Q5JQD4 70 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 PRR9Q5T870 116 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 DEFB125Q8N687 156 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 PRSS3P2Q8NHM4 247 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 FAM110AQ9BQ89 295 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 PHLDA3Q9Y5J5 127 aa5.11□□□□□ -1.59
BRCA1-216ENST00000484087 IGHV4-4A0A075B6R2 117 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 MUC21A0A0G2JKD1 596 aa5.1□□□□□ -1.59
BRCA1-216ENST00000484087 MUC21A0A140T8X8 626 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms