RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 DMBT1Q9UGM3 2413 aaPredicted RBP12.6□□□□□ -0.39
ABCF3-214ENST00000480562 CIDEAO60543 219 aa12.59□□□□□ -0.39
ABCF3-214ENST00000480562 RNASE3P12724 160 aaKnown RBP12.59□□□□□ -0.39
ABCF3-214ENST00000480562 LELP1Q5T871 98 aa12.59□□□□□ -0.39
ABCF3-214ENST00000480562 CYB561D1Q8N8Q1 229 aa12.59□□□□□ -0.39
ABCF3-214ENST00000480562 MYCBP2O75592 4640 aa12.59□□□□□ -0.39
ABCF3-214ENST00000480562 ZFP69Q49AA0 526 aa12.58□□□□□ -0.4
ABCF3-214ENST00000480562 Q6ZSN1 163 aa12.58□□□□□ -0.4
ABCF3-214ENST00000480562 ATP6V0E2Q8NHE4 81 aa12.58□□□□□ -0.4
ABCF3-214ENST00000480562 AQP10Q96PS8 301 aa12.58□□□□□ -0.4
ABCF3-214ENST00000480562 GTSF1LQ9H1H1 148 aa12.58□□□□□ -0.4
ABCF3-214ENST00000480562 TMEM167BQ9NRX6 74 aa12.58□□□□□ -0.4
ABCF3-214ENST00000480562 SRRM2Q9UQ35 2752 aaKnown RBP12.57□□□□□ -0.4
ABCF3-214ENST00000480562 CXorf1O96002 111 aa12.57□□□□□ -0.4
ABCF3-214ENST00000480562 MBP02144 154 aa12.57□□□□□ -0.4
ABCF3-214ENST00000480562 Q8N3U1 123 aa12.57□□□□□ -0.4
ABCF3-214ENST00000480562 Q8N814 137 aa12.57□□□□□ -0.4
ABCF3-214ENST00000480562 NTN5Q8WTR8 489 aaPredicted RBP12.57□□□□□ -0.4
ABCF3-214ENST00000480562 PTH2Q96A98 100 aa12.57□□□□□ -0.4
ABCF3-214ENST00000480562 LINC00479Q96M42 142 aa12.57□□□□□ -0.4
ABCF3-214ENST00000480562 ACTR3CQ9C0K3 210 aaPredicted RBP12.57□□□□□ -0.4
ABCF3-214ENST00000480562 TRAV34A0A0B4J273 112 aa12.56□□□□□ -0.4
ABCF3-214ENST00000480562 MGST1P10620 155 aaKnown RBP12.56□□□□□ -0.4
ABCF3-214ENST00000480562 SERF2P84101 59 aa12.56□□□□□ -0.4
ABCF3-214ENST00000480562 Q5BKY6 102 aa12.56□□□□□ -0.4
ABCF3-214ENST00000480562 FLG2Q5D862 2391 aaPredicted RBP12.55□□□□□ -0.4
ABCF3-214ENST00000480562 IGKV3D-20A0A0C4DH25 116 aa12.55□□□□□ -0.4
ABCF3-214ENST00000480562 SAPCD1Q5SSQ6 148 aa12.55□□□□□ -0.4
ABCF3-214ENST00000480562 MED28Q9H204 178 aa12.55□□□□□ -0.4
ABCF3-214ENST00000480562 PARLQ9H300 379 aa12.55□□□□□ -0.4
ABCF3-214ENST00000480562 TNFSF18Q9UNG2 199 aa12.55□□□□□ -0.4
ABCF3-214ENST00000480562 BOLA1Q9Y3E2 137 aa12.55□□□□□ -0.4
ABCF3-214ENST00000480562 GAGE12JA6NER3 117 aa12.54□□□□□ -0.4
ABCF3-214ENST00000480562 GAGE1Q13065 139 aa12.54□□□□□ -0.4
ABCF3-214ENST00000480562 GAGE4Q13068 117 aa12.54□□□□□ -0.4
ABCF3-214ENST00000480562 GAGE5Q13069 117 aa12.54□□□□□ -0.4
ABCF3-214ENST00000480562 LGALSLQ3ZCW2 172 aaPredicted RBP12.54□□□□□ -0.4
ABCF3-214ENST00000480562 GAGE13Q4V321 117 aa12.54□□□□□ -0.4
ABCF3-214ENST00000480562 TMEM70Q9BUB7 260 aa12.54□□□□□ -0.4
ABCF3-214ENST00000480562 FAM229AH3BQW9 127 aa12.53□□□□□ -0.4
ABCF3-214ENST00000480562 S100A4P26447 101 aaKnown RBP12.53□□□□□ -0.4
ABCF3-214ENST00000480562 OR2T35Q8NGX2 323 aa12.53□□□□□ -0.4
ABCF3-214ENST00000480562 JPT2Q9H910 190 aa12.53□□□□□ -0.4
ABCF3-214ENST00000480562 FAM30AQ9NZY2 134 aa12.53□□□□□ -0.4
ABCF3-214ENST00000480562 Q9UF83 564 aa12.53□□□□□ -0.4
ABCF3-214ENST00000480562 ARL2-SNX15V9GYD0 113 aa12.53□□□□□ -0.4
ABCF3-214ENST00000480562 A0A1W2PRE2 83 aa12.52□□□□□ -0.41
ABCF3-214ENST00000480562 A8MWV9 139 aa12.52□□□□□ -0.41
ABCF3-214ENST00000480562 IFNA7P01567 189 aa12.52□□□□□ -0.41
ABCF3-214ENST00000480562 UBE2G2P60604 165 aa12.52□□□□□ -0.41
ABCF3-214ENST00000480562 WFDC2Q14508 124 aa12.52□□□□□ -0.41
ABCF3-214ENST00000480562 ZNF726P1Q15940 193 aa12.52□□□□□ -0.41
ABCF3-214ENST00000480562 RPL7L1Q6DKI1 246 aaKnown RBP12.52□□□□□ -0.41
ABCF3-214ENST00000480562 ZFP2Q6ZN57 461 aa12.52□□□□□ -0.41
ABCF3-214ENST00000480562 SAMD10Q9BYL1 202 aa12.52□□□□□ -0.41
ABCF3-214ENST00000480562 FABP5P3A8MUU1 101 aa12.51□□□□□ -0.41
ABCF3-214ENST00000480562 LINC00694P0DN24 101 aa12.51□□□□□ -0.41
ABCF3-214ENST00000480562 ASIPP42127 132 aa12.51□□□□□ -0.41
ABCF3-214ENST00000480562 LAGE3Q14657 143 aa12.51□□□□□ -0.41
ABCF3-214ENST00000480562 TM2D2Q9BX73 214 aa12.51□□□□□ -0.41
ABCF3-214ENST00000480562 DAZ4Q86SG3 579 aaKnown RBP12.5□□□□□ -0.41
ABCF3-214ENST00000480562 C14orf178Q8N769 122 aaPredicted RBP12.5□□□□□ -0.41
ABCF3-214ENST00000480562 INO80EQ8NBZ0 244 aaPredicted RBP12.5□□□□□ -0.41
ABCF3-214ENST00000480562 DAZ3Q9NR90 486 aaKnown RBP12.5□□□□□ -0.41
ABCF3-214ENST00000480562 RNF222A6NCQ9 220 aa12.49□□□□□ -0.41
ABCF3-214ENST00000480562 H3BVH4 76 aa12.49□□□□□ -0.41
ABCF3-214ENST00000480562 PEX7O00628 323 aa12.49□□□□□ -0.41
ABCF3-214ENST00000480562 LECT2O14960 151 aa12.49□□□□□ -0.41
ABCF3-214ENST00000480562 FGF8P55075 233 aaPredicted RBP12.49□□□□□ -0.41
ABCF3-214ENST00000480562 UFSP1Q6NVU6 142 aa12.49□□□□□ -0.41
ABCF3-214ENST00000480562 Q86TA4 180 aa12.49□□□□□ -0.41
ABCF3-214ENST00000480562 FXYD6-FXYD2A0A087WZ82 144 aa12.48□□□□□ -0.41
ABCF3-214ENST00000480562 CTXND1A0A1B0GTU2 59 aa12.48□□□□□ -0.41
ABCF3-214ENST00000480562 B4DEV8 164 aa12.48□□□□□ -0.41
ABCF3-214ENST00000480562 M0R036 132 aa12.48□□□□□ -0.41
ABCF3-214ENST00000480562 PTTG1O95997 202 aa12.48□□□□□ -0.41
ABCF3-214ENST00000480562 GIPP09681 153 aaPredicted RBP12.48□□□□□ -0.41
ABCF3-214ENST00000480562 CRIP1P50238 77 aa12.48□□□□□ -0.41
ABCF3-214ENST00000480562 PIK3CD-AS1Q5SR53 167 aa12.48□□□□□ -0.41
ABCF3-214ENST00000480562 DMRTA1Q5VZB9 504 aa12.48□□□□□ -0.41
ABCF3-214ENST00000480562 BATF3Q9NR55 127 aa12.48□□□□□ -0.41
ABCF3-214ENST00000480562 IL36BQ9NZH7 164 aa12.48□□□□□ -0.41
ABCF3-214ENST00000480562 BORCS7-ASMTA0A0B4J1R7 106 aa12.47□□□□□ -0.41
ABCF3-214ENST00000480562 GRIFINA4D1Z8 144 aa12.47□□□□□ -0.41
ABCF3-214ENST00000480562 ZC2HC1AQ96GY0 325 aa12.47□□□□□ -0.41
ABCF3-214ENST00000480562 TRAV8-3A0A0A6YYJ7 113 aa12.46□□□□□ -0.41
ABCF3-214ENST00000480562 FAM74A7A6NL05 159 aa12.46□□□□□ -0.41
ABCF3-214ENST00000480562 KRBOX1C9JBD0 128 aa12.46□□□□□ -0.41
ABCF3-214ENST00000480562 ARMS2P0C7Q2 107 aa12.46□□□□□ -0.41
ABCF3-214ENST00000480562 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.45□□□□□ -0.42
ABCF3-214ENST00000480562 SH2D1AO60880 128 aa12.45□□□□□ -0.42
ABCF3-214ENST00000480562 FAM74A4Q5TZK3 123 aa12.45□□□□□ -0.42
ABCF3-214ENST00000480562 SYT8Q8NBV8 401 aa12.45□□□□□ -0.42
ABCF3-214ENST00000480562 HIST1H2BAQ96A08 127 aa12.45□□□□□ -0.42
ABCF3-214ENST00000480562 A0A087WWC5 75 aa12.44□□□□□ -0.42
ABCF3-214ENST00000480562 C1QBP02746 253 aa12.44□□□□□ -0.42
ABCF3-214ENST00000480562 TOR2AQ5JU69 321 aa12.44□□□□□ -0.42
ABCF3-214ENST00000480562 DNLZQ5SXM8 178 aa12.44□□□□□ -0.42
ABCF3-214ENST00000480562 AKR1C8PQ5T2L2 129 aa12.44□□□□□ -0.42
ABCF3-214ENST00000480562 OR11H4Q8NGC9 324 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms