RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 C14orf178Q8N769 122 aaPredicted RBP10.27□□□□□ -0.77
C9orf78-205ENST00000480023 ITLN2Q8WWU7 325 aaPredicted RBP10.27□□□□□ -0.77
C9orf78-205ENST00000480023 CCDC140Q96MF4 163 aa10.27□□□□□ -0.77
C9orf78-205ENST00000480023 FAM90A27PA6NNH2 459 aa10.26□□□□□ -0.77
C9orf78-205ENST00000480023 TMEM141Q96I45 108 aa10.26□□□□□ -0.77
C9orf78-205ENST00000480023 METTL26Q96S19 204 aa10.26□□□□□ -0.77
C9orf78-205ENST00000480023 TIMM17AQ99595 171 aa10.26□□□□□ -0.77
C9orf78-205ENST00000480023 WNK2Q9Y3S1 2297 aa10.26□□□□□ -0.77
C9orf78-205ENST00000480023 IGHV4OR15-8A0A075B7B6 117 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 A0A087WW49 117 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 TRAV21A0A0B4J279 112 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 NDUFV3P56181 108 aaKnown RBP10.25□□□□□ -0.77
C9orf78-205ENST00000480023 Q8N9W7 124 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 A0A0B4J2C4 111 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 B5MCH6 92 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 C9JAW5 83 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 NXPH4O95158 308 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 IGHV3-33P01772 117 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 GAGE2BQ13066 116 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 C9orf139Q6ZV77 190 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 LINC00477Q96M19 166 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 PHLDA3Q9Y5J5 127 aa10.25□□□□□ -0.77
C9orf78-205ENST00000480023 CEP250Q9BV73 2442 aa10.24□□□□□ -0.77
C9orf78-205ENST00000480023 SNCGO76070 127 aa10.24□□□□□ -0.77
C9orf78-205ENST00000480023 CD3EP07766 207 aa10.24□□□□□ -0.77
C9orf78-205ENST00000480023 VMO1Q7Z5L0 202 aa10.24□□□□□ -0.77
C9orf78-205ENST00000480023 TP53TG1Q9Y2A0 90 aa10.24□□□□□ -0.77
C9orf78-205ENST00000480023 IGHV3OR16-13A0A075B7E8 117 aa10.24□□□□□ -0.77
C9orf78-205ENST00000480023 IGHV3-74A0A0B4J1X5 117 aa10.24□□□□□ -0.77
C9orf78-205ENST00000480023 MGPP08493 103 aa10.24□□□□□ -0.77
C9orf78-205ENST00000480023 S100A4P26447 101 aaKnown RBP10.24□□□□□ -0.77
C9orf78-205ENST00000480023 RPL13AP40429 203 aaKnown RBP10.24□□□□□ -0.77
C9orf78-205ENST00000480023 ZNF876PQ49A33 203 aa10.24□□□□□ -0.77
C9orf78-205ENST00000480023 MINOS1Q5TGZ0 78 aa10.24□□□□□ -0.77
C9orf78-205ENST00000480023 TMEM263Q8WUH6 116 aaKnown RBP10.24□□□□□ -0.77
C9orf78-205ENST00000480023 MINOS1-NBL1R4GNA1 71 aa10.24□□□□□ -0.77
C9orf78-205ENST00000480023 J3QQQ9 107 aa10.23□□□□□ -0.77
C9orf78-205ENST00000480023 EIF4EBP3O60516 100 aaPredicted RBP10.23□□□□□ -0.77
C9orf78-205ENST00000480023 TGFAP01135 160 aa10.23□□□□□ -0.77
C9orf78-205ENST00000480023 IGF1P05019 195 aa10.23□□□□□ -0.77
C9orf78-205ENST00000480023 CRIP2P52943 208 aaPredicted RBP10.23□□□□□ -0.77
C9orf78-205ENST00000480023 POLR2KP53803 58 aaKnown RBP10.23□□□□□ -0.77
C9orf78-205ENST00000480023 C1orf122Q6ZSJ8 110 aa10.23□□□□□ -0.77
C9orf78-205ENST00000480023 C16orf92Q96LL3 132 aa10.23□□□□□ -0.77
C9orf78-205ENST00000480023 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.22□□□□□ -0.77
C9orf78-205ENST00000480023 A4D1N5 150 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 GAGE12JA6NER3 117 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 GAGE7O76087 117 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 GAGE12FP0CL80 117 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 GAGE12GP0CL81 117 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 GAGE12IP0CL82 117 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 LINC00315P59091 139 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 GAGE4Q13068 117 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 CLEC19AQ6UXS0 136 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 APRG1Q8IVJ8 170 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 ZNRF2Q8NHG8 242 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 KIF25-AS1Q9Y6Z4 181 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 TRBV7-1A0A0A6YYK4 115 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 TRAV4A0A0B4J268 109 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 ANXA2RQ3ZCQ2 193 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 Q8N1Y9 231 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 EEF1AKMT3Q96AZ1 226 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 C20orf173Q96LM9 149 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 FAM19A4Q96LR4 140 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 SPANXA1Q9NS26 97 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 ADGRG4Q8IZF6 3080 aa10.22□□□□□ -0.77
C9orf78-205ENST00000480023 PCNX1Q96RV3 2341 aa10.21□□□□□ -0.77
C9orf78-205ENST00000480023 POLEQ07864 2286 aa10.21□□□□□ -0.77
C9orf78-205ENST00000480023 RNASE3P12724 160 aaKnown RBP10.21□□□□□ -0.77
C9orf78-205ENST00000480023 IFITM1P13164 125 aa10.21□□□□□ -0.77
C9orf78-205ENST00000480023 EMP1P54849 157 aa10.21□□□□□ -0.77
C9orf78-205ENST00000480023 TRPT1Q86TN4 253 aaKnown RBP10.21□□□□□ -0.77
C9orf78-205ENST00000480023 ARHGAP32A7KAX9 2087 aa10.21□□□□□ -0.78
C9orf78-205ENST00000480023 TACC2O95359 2948 aa10.21□□□□□ -0.78
C9orf78-205ENST00000480023 IGHV3-49A0A0A0MS15 119 aa10.21□□□□□ -0.78
C9orf78-205ENST00000480023 OVOL1O14753 267 aa10.21□□□□□ -0.78
C9orf78-205ENST00000480023 ATP6V0E1O15342 81 aa10.21□□□□□ -0.78
C9orf78-205ENST00000480023 SPRY2O43597 315 aa10.21□□□□□ -0.78
C9orf78-205ENST00000480023 LGALS3P17931 250 aaKnown RBP10.21□□□□□ -0.78
C9orf78-205ENST00000480023 ECSCRQ19T08 205 aa10.21□□□□□ -0.78
C9orf78-205ENST00000480023 TMEM170BQ5T4T1 132 aa10.21□□□□□ -0.78
C9orf78-205ENST00000480023 DEFB124Q8NES8 71 aa10.21□□□□□ -0.78
C9orf78-205ENST00000480023 TRBV7-9A0A0J9YWB2 115 aa10.2□□□□□ -0.78
C9orf78-205ENST00000480023 CRLF1O75462 422 aa10.2□□□□□ -0.78
C9orf78-205ENST00000480023 ATXN8Q156A1 80 aa10.2□□□□□ -0.78
C9orf78-205ENST00000480023 LINC01620Q4KN68 170 aa10.2□□□□□ -0.78
C9orf78-205ENST00000480023 NTN5Q8WTR8 489 aaPredicted RBP10.2□□□□□ -0.78
C9orf78-205ENST00000480023 RAX2Q96IS3 184 aa10.2□□□□□ -0.78
C9orf78-205ENST00000480023 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.19□□□□□ -0.78
C9orf78-205ENST00000480023 VCYO14598 125 aa10.19□□□□□ -0.78
C9orf78-205ENST00000480023 LEPROTO15243 131 aa10.19□□□□□ -0.78
C9orf78-205ENST00000480023 OR10J6PQ8NGY7 276 aa10.19□□□□□ -0.78
C9orf78-205ENST00000480023 ODF3Q96PU9 254 aa10.19□□□□□ -0.78
C9orf78-205ENST00000480023 FAM110AQ9BQ89 295 aa10.19□□□□□ -0.78
C9orf78-205ENST00000480023 CNOT1A5YKK6 2376 aaKnown RBP10.19□□□□□ -0.78
C9orf78-205ENST00000480023 A0A0J9YX75 114 aa10.19□□□□□ -0.78
C9orf78-205ENST00000480023 SOCS3O14543 225 aa10.19□□□□□ -0.78
C9orf78-205ENST00000480023 RPL39P62891 51 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms