RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 MRPL35Q9NZE8 188 aaKnown RBP3.36□□□□□ -1.87
SSR1-207ENST00000479485 KLF13Q9Y2Y9 288 aaPredicted RBP3.36□□□□□ -1.87
SSR1-207ENST00000479485 V9GYY9 64 aa3.36□□□□□ -1.87
SSR1-207ENST00000479485 NCKAP5O14513 1909 aa3.36□□□□□ -1.87
SSR1-207ENST00000479485 MED12LQ86YW9 2145 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 IGLV3-12A0A075B6K2 115 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 TMSB15BA0A087X1C1 80 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 IGHV1-45A0A0A0MS14 117 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 TRAV13-1A0A0B4J241 112 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 TRBV30A0A0K0K1B3 111 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 OOSP1A8MZH6 123 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 MRPL33O75394 65 aaKnown RBP3.35□□□□□ -1.87
SSR1-207ENST00000479485 NDUFC2O95298 119 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 RNASE2P10153 161 aaKnown RBP3.35□□□□□ -1.87
SSR1-207ENST00000479485 CD24P25063 80 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 CCL8P80075 99 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 LOXL1Q08397 574 aaPredicted RBP3.35□□□□□ -1.87
SSR1-207ENST00000479485 Q1RN00 199 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 LYZL1Q6UWQ5 148 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 ZFP2Q6ZN57 461 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 C11orf53Q8IXP5 236 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 CCL4L1Q8NHW4 92 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 FLYWCH2Q96CP2 140 aaKnown RBP3.35□□□□□ -1.87
SSR1-207ENST00000479485 CNFNQ9BYD5 112 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 DEFB126Q9BYW3 111 aa3.35□□□□□ -1.87
SSR1-207ENST00000479485 TNRC6BQ9UPQ9 1833 aaKnown RBP3.35□□□□□ -1.87
SSR1-207ENST00000479485 ALPK2Q86TB3 2170 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 IGKV1OR2-108A0A075B7D4 117 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 TRAV17A0A0B4J275 112 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 LOC107984640A0A0U1RRK4 108 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 RBAKDNA6NC62 111 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 K7EM74 188 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 OVOL1O14753 267 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 NDUFA3O95167 84 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 INAFM2P0DMQ5 153 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 COX6A1P12074 109 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 PRDX2P32119 198 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 SEC61GP60059 68 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 MRPS36P82909 103 aaKnown RBP3.34□□□□□ -1.87
SSR1-207ENST00000479485 DUX4L9Q6RFH8 374 aaPredicted RBP3.34□□□□□ -1.87
SSR1-207ENST00000479485 LINC00322Q6ZN03 302 aaPredicted RBP3.34□□□□□ -1.87
SSR1-207ENST00000479485 Q6ZQT7 251 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 GOLT1AQ6ZVE7 132 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 SLC25A29Q8N8R3 303 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 C8orf31Q8N9H6 132 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 PLEKHB2Q96CS7 222 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 DPH3Q96FX2 82 aa3.34□□□□□ -1.87
SSR1-207ENST00000479485 FGF23Q9GZV9 251 aaPredicted RBP3.34□□□□□ -1.87
SSR1-207ENST00000479485 HCFC1P51610 2035 aa3.34□□□□□ -1.88
SSR1-207ENST00000479485 GOLGA4Q13439 2230 aaKnown RBP3.34□□□□□ -1.88
SSR1-207ENST00000479485 IGHV3OR16-12A0A075B7B8 117 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 IGHV1-69DA0A0B4J2H0 117 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 SPTY2D1-AS1A0A0U1RR47 76 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 TINCRA0A1B0GVN0 87 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 K7ENP7 123 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 FSTL3O95633 263 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 IGHV3-30P01768 117 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 IGHV3-30-5P0DP03 117 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 LGALS3P17931 250 aaKnown RBP3.33□□□□□ -1.88
SSR1-207ENST00000479485 PSMB8P28062 276 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 GTF3C1Q12789 2109 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 LINC00242Q5T6M2 205 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 PATE2Q6UY27 113 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 MDP1Q86V88 176 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 CD177Q8N6Q3 437 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 DAND5Q8N907 189 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 SCGB3A1Q96QR1 104 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 METTL26Q96S19 204 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 TTTY13Q9BZ97 58 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 NDUFA4L2Q9NRX3 87 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 PRR34Q9NV39 138 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 LAMTOR3Q9UHA4 124 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 LINC00527Q9UJ94 153 aa3.33□□□□□ -1.88
SSR1-207ENST00000479485 MYOFQ9NZM1 2061 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 MYO7BQ6PIF6 2116 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 TRBV19A0A075B6N1 114 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 IGHV3-15A0A0B4J1V0 119 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 TRAV3A0A0B4J244 114 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 IGHV5-51A0A0C4DH38 117 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 A0A0J9YW62 118 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 A0A0J9YX75 114 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 A0A0J9YY99 117 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 TEX49A0A1B0GTD5 131 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 TMEM89A2RUT3 159 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 IQCF6A8MYZ5 107 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 J3QLI3 93 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 M0R3E3 92 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 MRPS12O15235 138 aaKnown RBP3.32□□□□□ -1.88
SSR1-207ENST00000479485 SH2D1AO60880 128 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 IGHV3-33P01772 117 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 SSR4P51571 173 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 DLX1P56177 255 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 NPC2P61916 151 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 VMA21Q3ZAQ7 101 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 C5orf38Q86SI9 138 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 VKORC1L1Q8N0U8 176 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 SERP2Q8N6R1 65 aa3.32□□□□□ -1.88
SSR1-207ENST00000479485 PATE1Q8WXA2 126 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms