RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 NUDT15Q9NV35 164 aa8.25□□□□□ -1.09
SKA3-206ENST00000475251 IGKV2D-24A0A075B6R9 120 aa8.24□□□□□ -1.09
SKA3-206ENST00000475251 SERTM2A0A1B0GWG4 89 aa8.24□□□□□ -1.09
SKA3-206ENST00000475251 TAAR5O14804 337 aa8.24□□□□□ -1.09
SKA3-206ENST00000475251 H2AFB1P0C5Y9 115 aa8.24□□□□□ -1.09
SKA3-206ENST00000475251 H2AFB2P0C5Z0 115 aa8.24□□□□□ -1.09
SKA3-206ENST00000475251 ELOBQ15370 118 aa8.24□□□□□ -1.09
SKA3-206ENST00000475251 DPPA3Q6W0C5 159 aa8.24□□□□□ -1.09
SKA3-206ENST00000475251 ZFP2Q6ZN57 461 aa8.24□□□□□ -1.09
SKA3-206ENST00000475251 CYB561D1Q8N8Q1 229 aa8.24□□□□□ -1.09
SKA3-206ENST00000475251 C9orf85Q96MD7 179 aa8.24□□□□□ -1.09
SKA3-206ENST00000475251 MBD2Q9UBB5 411 aa8.24□□□□□ -1.09
SKA3-206ENST00000475251 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
SKA3-206ENST00000475251 GAGE12JA6NER3 117 aa8.23□□□□□ -1.09
SKA3-206ENST00000475251 A8MWV9 139 aa8.23□□□□□ -1.09
SKA3-206ENST00000475251 GHRHP01286 108 aa8.23□□□□□ -1.09
SKA3-206ENST00000475251 GAGE1Q13065 139 aa8.23□□□□□ -1.09
SKA3-206ENST00000475251 GAGE4Q13068 117 aa8.23□□□□□ -1.09
SKA3-206ENST00000475251 GAGE5Q13069 117 aa8.23□□□□□ -1.09
SKA3-206ENST00000475251 ZFP69Q49AA0 526 aa8.23□□□□□ -1.09
SKA3-206ENST00000475251 GAGE13Q4V321 117 aa8.23□□□□□ -1.09
SKA3-206ENST00000475251 ZNF506Q5JVG8 444 aa8.23□□□□□ -1.09
SKA3-206ENST00000475251 FFAR4Q5NUL3 377 aa8.23□□□□□ -1.09
SKA3-206ENST00000475251 KCNIP4Q6PIL6 250 aa8.23□□□□□ -1.09
SKA3-206ENST00000475251 PGPEP1LA6NFU8 196 aa8.22□□□□□ -1.09
SKA3-206ENST00000475251 K7EQM0 130 aa8.22□□□□□ -1.09
SKA3-206ENST00000475251 PLA2G10O15496 165 aa8.22□□□□□ -1.09
SKA3-206ENST00000475251 LINC00694P0DN24 101 aa8.22□□□□□ -1.09
SKA3-206ENST00000475251 PIK3CD-AS1Q5SR53 167 aa8.22□□□□□ -1.09
SKA3-206ENST00000475251 PQLC2Q6ZP29 291 aa8.22□□□□□ -1.09
SKA3-206ENST00000475251 TVP23CQ96ET8 276 aa8.22□□□□□ -1.09
SKA3-206ENST00000475251 CHCHD7Q9BUK0 85 aa8.22□□□□□ -1.09
SKA3-206ENST00000475251 A0A087WX48 190 aa8.21□□□□□ -1.1
SKA3-206ENST00000475251 Q0VG73 95 aa8.21□□□□□ -1.1
SKA3-206ENST00000475251 NIT1Q86X76 327 aa8.21□□□□□ -1.1
SKA3-206ENST00000475251 SCGB1C1Q8TD33 95 aa8.21□□□□□ -1.1
SKA3-206ENST00000475251 PARLQ9H300 379 aa8.21□□□□□ -1.1
SKA3-206ENST00000475251 OR5AC2Q9NZP5 309 aa8.21□□□□□ -1.1
SKA3-206ENST00000475251 A0A1W2PPV4 95 aa8.2□□□□□ -1.1
SKA3-206ENST00000475251 A6NHS1 94 aa8.2□□□□□ -1.1
SKA3-206ENST00000475251 GCGP01275 180 aa8.2□□□□□ -1.1
SKA3-206ENST00000475251 KLK12Q9UKR0 248 aa8.2□□□□□ -1.1
SKA3-206ENST00000475251 RHODO00212 210 aa8.19□□□□□ -1.1
SKA3-206ENST00000475251 RNASE3P12724 160 aaKnown RBP8.19□□□□□ -1.1
SKA3-206ENST00000475251 S100A4P26447 101 aaKnown RBP8.19□□□□□ -1.1
SKA3-206ENST00000475251 GNG5P63218 68 aa8.19□□□□□ -1.1
SKA3-206ENST00000475251 CYCSP99999 105 aaKnown RBP8.19□□□□□ -1.1
SKA3-206ENST00000475251 LGALSLQ3ZCW2 172 aaPredicted RBP8.19□□□□□ -1.1
SKA3-206ENST00000475251 LRRC37A5PQ49AS3 106 aa8.19□□□□□ -1.1
SKA3-206ENST00000475251 SMUG1Q53HV7 270 aa8.19□□□□□ -1.1
SKA3-206ENST00000475251 ATRAIDQ6UW56 229 aa8.19□□□□□ -1.1
SKA3-206ENST00000475251 OR2T35Q8NGX2 323 aa8.19□□□□□ -1.1
SKA3-206ENST00000475251 UBE2WQ96B02 151 aa8.19□□□□□ -1.1
SKA3-206ENST00000475251 LINC00479Q96M42 142 aa8.19□□□□□ -1.1
SKA3-206ENST00000475251 C1orf43Q9BWL3 253 aa8.19□□□□□ -1.1
SKA3-206ENST00000475251 RBM38Q9H0Z9 239 aaKnown RBP8.19□□□□□ -1.1
SKA3-206ENST00000475251 FAM240BA0A1B0GVZ2 78 aa8.18□□□□□ -1.1
SKA3-206ENST00000475251 ZNF80P51504 273 aaPredicted RBP8.18□□□□□ -1.1
SKA3-206ENST00000475251 C5orf17Q8NAS9 161 aa8.18□□□□□ -1.1
SKA3-206ENST00000475251 C11orf21Q9P2W6 132 aa8.18□□□□□ -1.1
SKA3-206ENST00000475251 CRPP02741 224 aa8.17□□□□□ -1.1
SKA3-206ENST00000475251 TCRAP04437 139 aa8.17□□□□□ -1.1
SKA3-206ENST00000475251 PET100P0DJ07 73 aa8.17□□□□□ -1.1
SKA3-206ENST00000475251 SAPCD1Q5SSQ6 148 aa8.17□□□□□ -1.1
SKA3-206ENST00000475251 Q6ZRU5 148 aa8.17□□□□□ -1.1
SKA3-206ENST00000475251 TMEM75Q8N9X5 138 aa8.17□□□□□ -1.1
SKA3-206ENST00000475251 DAZAP1Q96EP5 407 aaKnown RBP8.17□□□□□ -1.1
SKA3-206ENST00000475251 SGK494Q96LW2 274 aa8.17□□□□□ -1.1
SKA3-206ENST00000475251 SAMD10Q9BYL1 202 aa8.17□□□□□ -1.1
SKA3-206ENST00000475251 PSG8Q9UQ74 426 aa8.17□□□□□ -1.1
SKA3-206ENST00000475251 PKHD1L1Q86WI1 4243 aa8.17□□□□□ -1.1
SKA3-206ENST00000475251 ASIPP42127 132 aa8.16□□□□□ -1.1
SKA3-206ENST00000475251 FLI1Q01543 452 aaPredicted RBP8.16□□□□□ -1.1
SKA3-206ENST00000475251 OR2G3Q8NGZ4 309 aa8.16□□□□□ -1.1
SKA3-206ENST00000475251 HSPB11Q9Y547 144 aa8.16□□□□□ -1.1
SKA3-206ENST00000475251 A0A0D9SG52 128 aa8.15□□□□□ -1.1
SKA3-206ENST00000475251 H0YIZ8 118 aa8.15□□□□□ -1.1
SKA3-206ENST00000475251 DGAT2L7PQ6IED9 249 aa8.15□□□□□ -1.1
SKA3-206ENST00000475251 MZT2BQ6NZ67 158 aa8.15□□□□□ -1.1
SKA3-206ENST00000475251 C14orf178Q8N769 122 aaPredicted RBP8.15□□□□□ -1.1
SKA3-206ENST00000475251 DNAJC30Q96LL9 226 aa8.15□□□□□ -1.1
SKA3-206ENST00000475251 CCDC32Q9BV29 185 aa8.15□□□□□ -1.1
SKA3-206ENST00000475251 MRPL18Q9H0U6 180 aaKnown RBP8.15□□□□□ -1.1
SKA3-206ENST00000475251 EIF3GO75821 320 aaKnown RBP eCLIP8.14□□□□□ -1.11
SKA3-206ENST00000475251 SIX6O95475 246 aa8.14□□□□□ -1.11
SKA3-206ENST00000475251 HNRNPA3P51991 378 aaKnown RBP8.14□□□□□ -1.11
SKA3-206ENST00000475251 UFSP1Q6NVU6 142 aa8.14□□□□□ -1.11
SKA3-206ENST00000475251 PRNTQ86SH4 94 aa8.14□□□□□ -1.11
SKA3-206ENST00000475251 HSD17B11Q8NBQ5 300 aa8.14□□□□□ -1.11
SKA3-206ENST00000475251 OR10G7Q8NGN6 311 aa8.14□□□□□ -1.11
SKA3-206ENST00000475251 ZC2HC1AQ96GY0 325 aa8.14□□□□□ -1.11
SKA3-206ENST00000475251 IL36BQ9NZH7 164 aa8.14□□□□□ -1.11
SKA3-206ENST00000475251 TRBV10-1A0A0K0K1A3 114 aa8.13□□□□□ -1.11
SKA3-206ENST00000475251 ARL14EPLP0DKL9 152 aa8.13□□□□□ -1.11
SKA3-206ENST00000475251 MT1HL1P0DM35 61 aa8.13□□□□□ -1.11
SKA3-206ENST00000475251 PKIAP61925 76 aa8.13□□□□□ -1.11
SKA3-206ENST00000475251 RPL36AP83881 106 aaKnown RBP8.13□□□□□ -1.11
SKA3-206ENST00000475251 FAM74A4Q5TZK3 123 aa8.13□□□□□ -1.11
SKA3-206ENST00000475251 PPP1R1CQ8WVI7 109 aa8.13□□□□□ -1.11
SKA3-206ENST00000475251 RPL36ALQ969Q0 106 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms