RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 TSKUQ8WUA8 353 aa5.19□□□□□ -1.58
LSAMP-203ENST00000474851 SHANK2-AS3Q9BTD1 123 aa5.19□□□□□ -1.58
LSAMP-203ENST00000474851 SAMD10Q9BYL1 202 aa5.19□□□□□ -1.58
LSAMP-203ENST00000474851 ALMS1Q8TCU4 4167 aa5.19□□□□□ -1.58
LSAMP-203ENST00000474851 IGHV4-28A0A0C4DH34 117 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 A0A0J9YX75 114 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 A8MTW9 85 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 C11orf94C9JXX5 98 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 F6UB75 175 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 H3BRN7 92 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 MRPS12O15235 138 aaKnown RBP5.18□□□□□ -1.58
LSAMP-203ENST00000474851 PAGE4O60829 102 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 PSG9Q00887 426 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 SLC38A11Q08AI6 406 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 AMMECR1LQ6DCA0 310 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 RASL11AQ6T310 242 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 TEPPQ6URK8 271 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 TMEM136Q6ZRR5 245 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 C11orf45Q8TAV5 145 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 PHLDA1Q8WV24 401 aaPredicted RBP5.18□□□□□ -1.58
LSAMP-203ENST00000474851 MGST2Q99735 147 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 TMEM147Q9BVK8 224 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 SSBP4Q9BWG4 385 aaPredicted RBP5.18□□□□□ -1.58
LSAMP-203ENST00000474851 SLC25A22Q9H936 323 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 XCL2Q9UBD3 114 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 HIGD1AQ9Y241 93 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 ARL2-SNX15V9GYD0 113 aa5.18□□□□□ -1.58
LSAMP-203ENST00000474851 NUPR2A6NF83 97 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 OR7C2O60412 319 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 IGKV3-20P01619 116 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 MIFP14174 115 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 AMTP48728 403 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 SAMD13Q5VXD3 122 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 IGFL4Q6B9Z1 124 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 AMTNQ6UX39 209 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 OR10G9Q8NGN4 311 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 OR10G7Q8NGN6 311 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 C16orf92Q96LL3 132 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 GPR82Q96P67 336 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 V9GYV3 84 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 KMT2AQ03164 3969 aa5.17□□□□□ -1.58
LSAMP-203ENST00000474851 TRAV8-6A0A0B4J262 113 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 A0A1B0GV72 72 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 HLA-DQA1P01909 254 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 RPL7P18124 248 aaKnown RBP5.16□□□□□ -1.58
LSAMP-203ENST00000474851 CDC34P49427 236 aaPredicted RBP5.16□□□□□ -1.58
LSAMP-203ENST00000474851 FXYD7P58549 80 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 SEC11AP67812 179 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 C12orf74Q32Q52 190 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 MPV17L2Q567V2 206 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 MORN5Q5VZ52 161 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 SPATA31B1PQ5VZV4 182 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 MIC13Q5XKP0 118 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 EBLN2Q6P2I7 272 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 C1orf158Q8N1D5 194 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 RNF182Q8N6D2 247 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 C5orf17Q8NAS9 161 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 OCC1Q8TAD7 63 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 C18orf32Q8TCD1 76 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 LINC00476Q8WZB0 136 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 C1QTNF4Q9BXJ3 329 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 OSTCQ9NRP0 149 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 RNF24Q9Y225 148 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 WDR83OSQ9Y284 106 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 KLK5Q9Y337 293 aaPredicted RBP5.16□□□□□ -1.58
LSAMP-203ENST00000474851 DNAH10Q8IVF4 4471 aa5.16□□□□□ -1.58
LSAMP-203ENST00000474851 A0A087X0K7 114 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 SMIM27A0A1W2PRY6 76 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 SNURFLB1AK76 121 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 K7EN84 100 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 K7EP34 96 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 NDUFB4O95168 129 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 STAG3L2P0CL84 134 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 STAG3L3P0CL85 134 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 HLA-DMBP28068 263 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 S100A7P31151 101 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 ATP5G3P48201 142 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 HIST1H1AQ02539 215 aaPredicted RBP5.15□□□□□ -1.59
LSAMP-203ENST00000474851 LINC00305Q7Z4B0 112 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 PMCHL2Q9BQD1 86 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 DERL1Q9BUN8 251 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 SCRT2Q9NQ03 307 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 CELA1Q9UNI1 258 aa5.15□□□□□ -1.59
LSAMP-203ENST00000474851 DNAH2Q9P225 4427 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 BIRC6Q9NR09 4857 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 TRAV5A0A0B4J249 113 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 TRAV34A0A0B4J273 112 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 MUC21A0A0G2JKD1 596 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 MUC21A0A140T8X8 626 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 SMIM9A6NGZ8 99 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 C9orf118A6NHY6 69 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 H3BRM9 83 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 PRB4P10163 310 aaPredicted RBP5.14□□□□□ -1.59
LSAMP-203ENST00000474851 UBE2G1P62253 170 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 MUC21Q5SSG8 566 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 FAM162BQ5T6X4 162 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 SLC25A34Q6PIV7 304 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 Q6ZTC4 211 aa5.14□□□□□ -1.59
LSAMP-203ENST00000474851 GTF2H5Q6ZYL4 71 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms