RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 OCC1Q8TAD7 63 aa8.72□□□□□ -1.01
DDX56-209ENST00000473924 LINC00476Q8WZB0 136 aa8.72□□□□□ -1.01
DDX56-209ENST00000473924 SMIM7Q9BQ49 75 aa8.72□□□□□ -1.01
DDX56-209ENST00000473924 PHLDA3Q9Y5J5 127 aa8.72□□□□□ -1.01
DDX56-209ENST00000473924 ZNF727A8MUV8 499 aa8.71□□□□□ -1.02
DDX56-209ENST00000473924 P01737 135 aa8.71□□□□□ -1.02
DDX56-209ENST00000473924 SLAQ13239 276 aa8.71□□□□□ -1.02
DDX56-209ENST00000473924 OR2D3Q8NGH3 330 aa8.71□□□□□ -1.02
DDX56-209ENST00000473924 PTH2Q96A98 100 aa8.71□□□□□ -1.02
DDX56-209ENST00000473924 ZNF479Q96JC4 524 aa8.71□□□□□ -1.02
DDX56-209ENST00000473924 XKRY2A2RUG3 117 aa8.7□□□□□ -1.02
DDX56-209ENST00000473924 C19orf71A6NCJ1 209 aa8.7□□□□□ -1.02
DDX56-209ENST00000473924 CXCL1P09341 107 aa8.7□□□□□ -1.02
DDX56-209ENST00000473924 RPS20P60866 119 aaKnown RBP8.7□□□□□ -1.02
DDX56-209ENST00000473924 LGALS9CQ6DKI2 356 aa8.7□□□□□ -1.02
DDX56-209ENST00000473924 SMDT1Q9H4I9 107 aa8.7□□□□□ -1.02
DDX56-209ENST00000473924 PRO0255Q9UI72 69 aa8.7□□□□□ -1.02
DDX56-209ENST00000473924 HHLA3Q9XRX5 114 aa8.7□□□□□ -1.02
DDX56-209ENST00000473924 K7EN84 100 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 M0R381 172 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 PAX4O43316 350 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 P0DMU3 169 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 FAM231AP0DMU4 169 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 FAM231CP0DMU5 169 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 MED14OSP0DP75 135 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 SRSF3P84103 164 aaKnown RBP8.69□□□□□ -1.02
DDX56-209ENST00000473924 IFITM2Q01629 132 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 FHL2Q14192 279 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 PIK3CD-AS1Q5SR53 167 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 CFAP126Q5VTH2 177 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 DMRTA1Q5VZB9 504 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 ZNF575Q86XF7 245 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 UBE2DNLQ8IWF7 75 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 ZFP82Q8N141 532 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 POM121L12Q8N7R1 296 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 NUDT10Q8NFP7 164 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 NUDT11Q96G61 164 aa8.69□□□□□ -1.02
DDX56-209ENST00000473924 MUC4Q99102 2169 aa8.68□□□□□ -1.02
DDX56-209ENST00000473924 A8MWV9 139 aa8.68□□□□□ -1.02
DDX56-209ENST00000473924 H3BNG1 76 aa8.68□□□□□ -1.02
DDX56-209ENST00000473924 RS1O15537 224 aa8.68□□□□□ -1.02
DDX56-209ENST00000473924 CIDEAO60543 219 aa8.68□□□□□ -1.02
DDX56-209ENST00000473924 CRYBA4P53673 196 aa8.68□□□□□ -1.02
DDX56-209ENST00000473924 FAM74A3Q4VXF1 159 aa8.68□□□□□ -1.02
DDX56-209ENST00000473924 CLLU1Q5K131 121 aa8.68□□□□□ -1.02
DDX56-209ENST00000473924 TPPP3Q9BW30 176 aa8.68□□□□□ -1.02
DDX56-209ENST00000473924 RNASE7Q9H1E1 156 aaKnown RBP8.68□□□□□ -1.02
DDX56-209ENST00000473924 SCRT2Q9NQ03 307 aa8.68□□□□□ -1.02
DDX56-209ENST00000473924 LY96Q9Y6Y9 160 aa8.68□□□□□ -1.02
DDX56-209ENST00000473924 IGHV3-73A0A0B4J1V6 119 aa8.67□□□□□ -1.02
DDX56-209ENST00000473924 C9JQL5 133 aa8.67□□□□□ -1.02
DDX56-209ENST00000473924 OR5AL1P0C617 328 aa8.67□□□□□ -1.02
DDX56-209ENST00000473924 GZMBP10144 247 aa8.67□□□□□ -1.02
DDX56-209ENST00000473924 ERVFC1-1P60608 527 aa8.67□□□□□ -1.02
DDX56-209ENST00000473924 SSTP61278 116 aa8.67□□□□□ -1.02
DDX56-209ENST00000473924 SPANXN1Q5VSR9 72 aa8.67□□□□□ -1.02
DDX56-209ENST00000473924 FER1L6-AS1Q8NA97 138 aa8.67□□□□□ -1.02
DDX56-209ENST00000473924 VSIG2Q96IQ7 327 aa8.67□□□□□ -1.02
DDX56-209ENST00000473924 RPP21Q9H633 154 aaKnown RBP8.67□□□□□ -1.02
DDX56-209ENST00000473924 MUC21A0A0G2JKD1 596 aa8.66□□□□□ -1.02
DDX56-209ENST00000473924 MUC21A0A140T8X8 626 aa8.66□□□□□ -1.02
DDX56-209ENST00000473924 SNAI2O43623 268 aa8.66□□□□□ -1.02
DDX56-209ENST00000473924 GATCO43716 136 aaKnown RBP8.66□□□□□ -1.02
DDX56-209ENST00000473924 TMEM241Q24JQ0 296 aa8.66□□□□□ -1.02
DDX56-209ENST00000473924 SOHLH1Q5JUK2 328 aa8.66□□□□□ -1.02
DDX56-209ENST00000473924 FAM74A4Q5TZK3 123 aa8.66□□□□□ -1.02
DDX56-209ENST00000473924 LINC01551Q86U37 167 aa8.66□□□□□ -1.02
DDX56-209ENST00000473924 OR10AG1Q8NH19 301 aa8.66□□□□□ -1.02
DDX56-209ENST00000473924 SSBP4Q9BWG4 385 aaPredicted RBP8.66□□□□□ -1.02
DDX56-209ENST00000473924 JPT2Q9H910 190 aa8.66□□□□□ -1.02
DDX56-209ENST00000473924 ICOSQ9Y6W8 199 aa8.66□□□□□ -1.02
DDX56-209ENST00000473924 GATA1P15976 413 aaPredicted RBP8.65□□□□□ -1.02
DDX56-209ENST00000473924 CCL18P55774 89 aa8.65□□□□□ -1.02
DDX56-209ENST00000473924 ZFP2Q6ZN57 461 aa8.65□□□□□ -1.02
DDX56-209ENST00000473924 FAM231DQ6ZW35 169 aa8.65□□□□□ -1.02
DDX56-209ENST00000473924 SFRP2Q96HF1 295 aa8.65□□□□□ -1.02
DDX56-209ENST00000473924 NAT8Q9UHE5 227 aa8.65□□□□□ -1.02
DDX56-209ENST00000473924 A0A087WWL8 130 aa8.64□□□□□ -1.03
DDX56-209ENST00000473924 A0A096LPF7 62 aa8.64□□□□□ -1.03
DDX56-209ENST00000473924 A0A1W2PPQ1 181 aa8.64□□□□□ -1.03
DDX56-209ENST00000473924 F2Z2F3 143 aa8.64□□□□□ -1.03
DDX56-209ENST00000473924 RHODO00212 210 aa8.64□□□□□ -1.03
DDX56-209ENST00000473924 IGLC6P0CF74 106 aa8.64□□□□□ -1.03
DDX56-209ENST00000473924 GYPEP15421 78 aa8.64□□□□□ -1.03
DDX56-209ENST00000473924 ADIRFQ15847 76 aa8.64□□□□□ -1.03
DDX56-209ENST00000473924 MRPL23Q16540 153 aaKnown RBP8.64□□□□□ -1.03
DDX56-209ENST00000473924 RNF212Q495C1 297 aa8.64□□□□□ -1.03
DDX56-209ENST00000473924 PRADC1Q9BSG0 188 aa8.64□□□□□ -1.03
DDX56-209ENST00000473924 SAMD10Q9BYL1 202 aa8.64□□□□□ -1.03
DDX56-209ENST00000473924 TRBV6-4A0A1B0GX49 114 aa8.63□□□□□ -1.03
DDX56-209ENST00000473924 A8MWL6 223 aa8.63□□□□□ -1.03
DDX56-209ENST00000473924 K7EQD1 137 aa8.63□□□□□ -1.03
DDX56-209ENST00000473924 SRIP30626 198 aa8.63□□□□□ -1.03
DDX56-209ENST00000473924 RPL23P62829 140 aaKnown RBP8.63□□□□□ -1.03
DDX56-209ENST00000473924 CACNG7P62955 275 aa8.63□□□□□ -1.03
DDX56-209ENST00000473924 RHOHQ15669 191 aa8.63□□□□□ -1.03
DDX56-209ENST00000473924 LYZL1Q6UWQ5 148 aa8.63□□□□□ -1.03
DDX56-209ENST00000473924 C15orf54Q8N8G6 183 aa8.63□□□□□ -1.03
DDX56-209ENST00000473924 SLC25A29Q8N8R3 303 aa8.63□□□□□ -1.03
DDX56-209ENST00000473924 NACAE9PAV3 2078 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms