RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ZC2HC1AQ96GY0 325 aa10.52□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 Q6ZRM9 215 aa10.52□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 PNRC2Q9NPJ4 139 aaKnown RBP10.52□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 COL4A6Q14031 1691 aa10.52□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 MRPL51Q4U2R6 128 aaKnown RBP10.51□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 TMEM75Q8N9X5 138 aa10.51□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 TMEM141Q96I45 108 aa10.51□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 GP9P14770 177 aa10.51□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 FBLN5Q9UBX5 448 aa10.51□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 NPSP0C0P6 89 aa10.51□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 WDR86Q86TI4 376 aa10.51□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 SPART-AS1P0CW21 52 aa10.51□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 A0A0J9YWU9 116 aa10.51□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 HLA-DMBP28068 263 aa10.51□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 BVES-AS1Q5T3Y7 98 aa10.51□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 NDUFA4O00483 81 aa10.5□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 LTAP01374 205 aa10.5□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 HERVK_113P63121 156 aa10.5□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 ZNF106Q9H2Y7 1883 aaKnown RBP10.5□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 ZNF134P52741 427 aa10.5□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 KIAA1671Q9BY89 1806 aa10.5□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 DIAPH2-AS1Q14236 149 aa10.5□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 DEFB125Q8N687 156 aa10.5□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 COLCA2A8K830 154 aa10.5□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 MPZP25189 248 aa10.5□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 MRPL53Q96EL3 112 aaKnown RBP10.5□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 FGF16O43320 207 aa10.5□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 RHOHQ15669 191 aa10.5□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 A0A096LNI7 61 aa10.49□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 WIPF3A6NGB9 483 aa10.49□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 A0A0G2JMZ2 1700 aa10.49□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 LRRC37A2A6NM11 1700 aa10.49□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 GRNP28799 593 aaKnown RBP10.49□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 C7orf33Q8WU49 177 aa10.49□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 K7ERJ3 54 aa10.49□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 NPBQ8NG41 125 aa10.49□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 PIEZO2Q9H5I5 2752 aa10.49□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 Q8NFD4 153 aa10.49□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 CARD19Q96LW7 228 aa10.49□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 TRAV4A0A0B4J268 109 aa10.49□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 PLXNA4Q9HCM2 1894 aa10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 TRBV24-1A0A075B6N3 115 aa10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 PCP2Q8IVA1 136 aa10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 MRPL27Q9P0M9 148 aaKnown RBP10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 FAM231BA6NCW3 169 aa10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 C1orf194Q5T5A4 169 aa10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 SRSF8Q9BRL6 282 aaKnown RBP10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 ZFP36P26651 326 aaKnown RBP10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 AMTNQ6UX39 209 aa10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 TMEM14BQ9NUH8 114 aa10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 LYPD3O95274 346 aa10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 COX7A2LO14548 114 aa10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 MRPL23Q16540 153 aaKnown RBP10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 MRPL35Q9NZE8 188 aaKnown RBP10.48□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 IGLV3-9A0A075B6K5 115 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 J3QLI3 93 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 Q9H8V8 135 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 LRRK2Q5S007 2527 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 IGKV2-24A0A0C4DH68 120 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 IGHV7-4-1A0A0J9YVY3 117 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 PSMB8P28062 276 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 ZFP2Q6ZN57 461 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 VPREB3Q9UKI3 123 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 IGHV4-30-4P0DP06 118 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 IGHV4-31P0DP07 118 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 J3QRE1 110 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 B3GALT5-AS1P59052 145 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 ODF1Q14990 250 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 HIST2H2BCQ6DN03 193 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 LHFPL1Q86WI0 220 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 PRSS46E5RG02 174 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 IGHV2-70P01814 119 aa10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 MRPL55Q7Z7F7 128 aaKnown RBP10.47□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 TLN1Q9Y490 2541 aaKnown RBP10.46□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 THSD7AQ9UPZ6 1657 aa10.46□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 TRBV19A0A075B6N1 114 aa10.46□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 NDUFA4L2Q9NRX3 87 aa10.46□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 PRO1854Q9UHT4 67 aa10.46□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 KLF2Q9Y5W3 355 aaPredicted RBP10.46□□□□□ -0.73
NPHP3-ACAD11-201ENST00000471702 A0A087WZ39 114 aa10.46□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 A0A1B0GW64 132 aa10.46□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 PRR25Q96S07 402 aa10.46□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 ANKHD1Q8IWZ3 2542 aaKnown RBP10.46□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 K7EMI3 77 aa10.46□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 DEFB135Q30KP9 77 aa10.46□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 ETDBQ3ZM63 59 aa10.46□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 C9JQL5 133 aa10.45□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 Q8N8P6 123 aa10.45□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 SPANXDQ9BXN6 97 aa10.45□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 H3BMG7 143 aa10.45□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 C14orf177Q52M58 125 aa10.45□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 FN1P02751 2386 aaKnown RBP10.45□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 RAI1Q7Z5J4 1906 aaPredicted RBP10.45□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 DEFB113Q30KQ7 82 aa10.45□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 WIPF2Q8TF74 440 aaPredicted RBP10.45□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 NUP210LQ5VU65 1888 aa10.44□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 PRSS33Q8NF86 280 aa10.44□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 YPEL3P61236 119 aaPredicted RBP10.44□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 J3QQQ9 107 aa10.44□□□□□ -0.74
NPHP3-ACAD11-201ENST00000471702 JMJD7-PLA2G4BH0Y9G9 81 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms