RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SERF2P84101 59 aa8.89□□□□□ -0.99
CPSF4-210ENST00000469897 RHOHQ15669 191 aa8.89□□□□□ -0.99
CPSF4-210ENST00000469897 ZNF506Q5JVG8 444 aa8.89□□□□□ -0.99
CPSF4-210ENST00000469897 Q5VSD8 79 aa8.89□□□□□ -0.99
CPSF4-210ENST00000469897 ATP6V0E2Q8NHE4 81 aa8.89□□□□□ -0.99
CPSF4-210ENST00000469897 AQP10Q96PS8 301 aa8.89□□□□□ -0.99
CPSF4-210ENST00000469897 ACTR3CQ9C0K3 210 aaPredicted RBP8.89□□□□□ -0.99
CPSF4-210ENST00000469897 SH3BGRL3Q9H299 93 aa8.89□□□□□ -0.99
CPSF4-210ENST00000469897 TRAV34A0A0B4J273 112 aa8.88□□□□□ -0.99
CPSF4-210ENST00000469897 ZFP69Q49AA0 526 aa8.88□□□□□ -0.99
CPSF4-210ENST00000469897 SAPCD1Q5SSQ6 148 aa8.88□□□□□ -0.99
CPSF4-210ENST00000469897 LELP1Q5T871 98 aa8.88□□□□□ -0.99
CPSF4-210ENST00000469897 CYB561D1Q8N8Q1 229 aa8.88□□□□□ -0.99
CPSF4-210ENST00000469897 PTH2Q96A98 100 aa8.88□□□□□ -0.99
CPSF4-210ENST00000469897 GTSF1LQ9H1H1 148 aa8.88□□□□□ -0.99
CPSF4-210ENST00000469897 MED28Q9H204 178 aa8.88□□□□□ -0.99
CPSF4-210ENST00000469897 TMEM167BQ9NRX6 74 aa8.88□□□□□ -0.99
CPSF4-210ENST00000469897 TNFSF18Q9UNG2 199 aa8.88□□□□□ -0.99
CPSF4-210ENST00000469897 IGKV3D-20A0A0C4DH25 116 aa8.87□□□□□ -0.99
CPSF4-210ENST00000469897 MGST1P10620 155 aaKnown RBP8.87□□□□□ -0.99
CPSF4-210ENST00000469897 Q8N814 137 aa8.87□□□□□ -0.99
CPSF4-210ENST00000469897 GAGE12JA6NER3 117 aa8.86□□□□□ -0.99
CPSF4-210ENST00000469897 FABP5P3A8MUU1 101 aa8.86□□□□□ -0.99
CPSF4-210ENST00000469897 IFNA7P01567 189 aa8.86□□□□□ -0.99
CPSF4-210ENST00000469897 S100A4P26447 101 aaKnown RBP8.86□□□□□ -0.99
CPSF4-210ENST00000469897 GAGE1Q13065 139 aa8.86□□□□□ -0.99
CPSF4-210ENST00000469897 GAGE4Q13068 117 aa8.86□□□□□ -0.99
CPSF4-210ENST00000469897 GAGE5Q13069 117 aa8.86□□□□□ -0.99
CPSF4-210ENST00000469897 LGALSLQ3ZCW2 172 aaPredicted RBP8.86□□□□□ -0.99
CPSF4-210ENST00000469897 GAGE13Q4V321 117 aa8.86□□□□□ -0.99
CPSF4-210ENST00000469897 RPL7L1Q6DKI1 246 aaKnown RBP8.86□□□□□ -0.99
CPSF4-210ENST00000469897 OR2T35Q8NGX2 323 aa8.86□□□□□ -0.99
CPSF4-210ENST00000469897 JPT2Q9H910 190 aa8.86□□□□□ -0.99
CPSF4-210ENST00000469897 Q9UF83 564 aa8.86□□□□□ -0.99
CPSF4-210ENST00000469897 FAT1Q14517 4588 aa8.86□□□□□ -0.99
CPSF4-210ENST00000469897 A0A1W2PRE2 83 aa8.85□□□□□ -0.99
CPSF4-210ENST00000469897 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
CPSF4-210ENST00000469897 UBE2G2P60604 165 aa8.85□□□□□ -0.99
CPSF4-210ENST00000469897 ZNF726P1Q15940 193 aa8.85□□□□□ -0.99
CPSF4-210ENST00000469897 Q8N3U1 123 aa8.85□□□□□ -0.99
CPSF4-210ENST00000469897 NTN5Q8WTR8 489 aaPredicted RBP8.85□□□□□ -0.99
CPSF4-210ENST00000469897 PARLQ9H300 379 aa8.85□□□□□ -0.99
CPSF4-210ENST00000469897 FAM30AQ9NZY2 134 aa8.85□□□□□ -0.99
CPSF4-210ENST00000469897 BOLA1Q9Y3E2 137 aa8.85□□□□□ -0.99
CPSF4-210ENST00000469897 ARL2-SNX15V9GYD0 113 aa8.85□□□□□ -0.99
CPSF4-210ENST00000469897 CRIP1P50238 77 aa8.84□□□□□ -0.99
CPSF4-210ENST00000469897 ZFP2Q6ZN57 461 aa8.84□□□□□ -0.99
CPSF4-210ENST00000469897 INO80EQ8NBZ0 244 aaPredicted RBP8.84□□□□□ -0.99
CPSF4-210ENST00000469897 SAMD10Q9BYL1 202 aa8.84□□□□□ -0.99
CPSF4-210ENST00000469897 A8MWV9 139 aa8.83□□□□□ -1
CPSF4-210ENST00000469897 ASIPP42127 132 aa8.83□□□□□ -1
CPSF4-210ENST00000469897 FGF8P55075 233 aaPredicted RBP8.83□□□□□ -1
CPSF4-210ENST00000469897 DMRTA1Q5VZB9 504 aa8.83□□□□□ -1
CPSF4-210ENST00000469897 C14orf178Q8N769 122 aaPredicted RBP8.83□□□□□ -1
CPSF4-210ENST00000469897 TM2D2Q9BX73 214 aa8.83□□□□□ -1
CPSF4-210ENST00000469897 FXYD6-FXYD2A0A087WZ82 144 aa8.82□□□□□ -1
CPSF4-210ENST00000469897 BORCS7-ASMTA0A0B4J1R7 106 aa8.82□□□□□ -1
CPSF4-210ENST00000469897 GRIFINA4D1Z8 144 aa8.82□□□□□ -1
CPSF4-210ENST00000469897 RNF222A6NCQ9 220 aa8.82□□□□□ -1
CPSF4-210ENST00000469897 B4DEV8 164 aa8.82□□□□□ -1
CPSF4-210ENST00000469897 PEX7O00628 323 aa8.82□□□□□ -1
CPSF4-210ENST00000469897 PTTG1O95997 202 aa8.82□□□□□ -1
CPSF4-210ENST00000469897 WFDC2Q14508 124 aa8.82□□□□□ -1
CPSF4-210ENST00000469897 UFSP1Q6NVU6 142 aa8.82□□□□□ -1
CPSF4-210ENST00000469897 DAZ4Q86SG3 579 aaKnown RBP8.82□□□□□ -1
CPSF4-210ENST00000469897 TMEM70Q9BUB7 260 aa8.82□□□□□ -1
CPSF4-210ENST00000469897 DAZ3Q9NR90 486 aaKnown RBP8.82□□□□□ -1
CPSF4-210ENST00000469897 HERC1Q15751 4861 aa8.81□□□□□ -1
CPSF4-210ENST00000469897 CTXND1A0A1B0GTU2 59 aa8.81□□□□□ -1
CPSF4-210ENST00000469897 FAM74A7A6NL05 159 aa8.81□□□□□ -1
CPSF4-210ENST00000469897 KRBOX1C9JBD0 128 aa8.81□□□□□ -1
CPSF4-210ENST00000469897 M0R036 132 aa8.81□□□□□ -1
CPSF4-210ENST00000469897 LECT2O14960 151 aa8.81□□□□□ -1
CPSF4-210ENST00000469897 GIPP09681 153 aaPredicted RBP8.81□□□□□ -1
CPSF4-210ENST00000469897 ARMS2P0C7Q2 107 aa8.81□□□□□ -1
CPSF4-210ENST00000469897 PIK3CD-AS1Q5SR53 167 aa8.81□□□□□ -1
CPSF4-210ENST00000469897 IL36BQ9NZH7 164 aa8.81□□□□□ -1
CPSF4-210ENST00000469897 TRAV8-3A0A0A6YYJ7 113 aa8.8□□□□□ -1
CPSF4-210ENST00000469897 H3BVH4 76 aa8.8□□□□□ -1
CPSF4-210ENST00000469897 LINC00694P0DN24 101 aa8.8□□□□□ -1
CPSF4-210ENST00000469897 LAGE3Q14657 143 aa8.8□□□□□ -1
CPSF4-210ENST00000469897 HIST1H2BAQ96A08 127 aa8.8□□□□□ -1
CPSF4-210ENST00000469897 ZC2HC1AQ96GY0 325 aa8.8□□□□□ -1
CPSF4-210ENST00000469897 A0A087WWC5 75 aa8.79□□□□□ -1
CPSF4-210ENST00000469897 TMSB15BA0A087X1C1 80 aa8.79□□□□□ -1
CPSF4-210ENST00000469897 SH2D1AO60880 128 aa8.79□□□□□ -1
CPSF4-210ENST00000469897 AKR1C8PQ5T2L2 129 aa8.79□□□□□ -1
CPSF4-210ENST00000469897 Q86TA4 180 aa8.79□□□□□ -1
CPSF4-210ENST00000469897 SYT8Q8NBV8 401 aa8.79□□□□□ -1
CPSF4-210ENST00000469897 BAALCQ8WXS3 180 aa8.79□□□□□ -1
CPSF4-210ENST00000469897 NKX6-2Q9C056 277 aaPredicted RBP8.79□□□□□ -1
CPSF4-210ENST00000469897 ZFP30Q9Y2G7 519 aa8.79□□□□□ -1
CPSF4-210ENST00000469897 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.78□□□□□ -1
CPSF4-210ENST00000469897 A0A087WWL8 130 aa8.78□□□□□ -1
CPSF4-210ENST00000469897 DNLZQ5SXM8 178 aa8.78□□□□□ -1
CPSF4-210ENST00000469897 FAM74A4Q5TZK3 123 aa8.78□□□□□ -1
CPSF4-210ENST00000469897 OR11H4Q8NGC9 324 aa8.78□□□□□ -1
CPSF4-210ENST00000469897 DNAJC30Q96LL9 226 aa8.78□□□□□ -1
CPSF4-210ENST00000469897 VPS13BQ7Z7G8 4022 aa8.78□□□□□ -1
CPSF4-210ENST00000469897 M0R381 172 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms