RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PTH2Q96A98 100 aa16.38■□□□□ 0.21
PTCH1-210ENST00000468211 ACTR3CQ9C0K3 210 aaPredicted RBP16.38■□□□□ 0.21
PTCH1-210ENST00000468211 Q9HAA7 133 aa16.38■□□□□ 0.21
PTCH1-210ENST00000468211 TRAV8-6A0A0B4J262 113 aa16.37■□□□□ 0.21
PTCH1-210ENST00000468211 IGKV3D-20A0A0C4DH25 116 aa16.37■□□□□ 0.21
PTCH1-210ENST00000468211 CIDEAO60543 219 aa16.37■□□□□ 0.21
PTCH1-210ENST00000468211 IGHV3-30P01768 117 aa16.37■□□□□ 0.21
PTCH1-210ENST00000468211 IGHV3-33P01772 117 aa16.37■□□□□ 0.21
PTCH1-210ENST00000468211 IGHV3-30-3P0DP02 117 aa16.37■□□□□ 0.21
PTCH1-210ENST00000468211 IGHV3-30-5P0DP03 117 aa16.37■□□□□ 0.21
PTCH1-210ENST00000468211 Q5VSD8 79 aa16.37■□□□□ 0.21
PTCH1-210ENST00000468211 RPL7L1Q6DKI1 246 aaKnown RBP16.37■□□□□ 0.21
PTCH1-210ENST00000468211 PSCAO43653 123 aa16.36■□□□□ 0.21
PTCH1-210ENST00000468211 SMR3BP02814 79 aaPredicted RBP16.36■□□□□ 0.21
PTCH1-210ENST00000468211 ZFP69Q49AA0 526 aa16.36■□□□□ 0.21
PTCH1-210ENST00000468211 LELP1Q5T871 98 aa16.36■□□□□ 0.21
PTCH1-210ENST00000468211 Q8N3U1 123 aa16.36■□□□□ 0.21
PTCH1-210ENST00000468211 RNF222A6NCQ9 220 aa16.35■□□□□ 0.21
PTCH1-210ENST00000468211 PTTG1O95997 202 aa16.35■□□□□ 0.21
PTCH1-210ENST00000468211 INAFM2P0DMQ5 153 aa16.35■□□□□ 0.21
PTCH1-210ENST00000468211 SAPCD1Q5SSQ6 148 aa16.35■□□□□ 0.21
PTCH1-210ENST00000468211 ATP6V0E2Q8NHE4 81 aa16.35■□□□□ 0.21
PTCH1-210ENST00000468211 GTSF1LQ9H1H1 148 aa16.35■□□□□ 0.21
PTCH1-210ENST00000468211 Q9UF83 564 aa16.35■□□□□ 0.21
PTCH1-210ENST00000468211 A0A1W2PRE2 83 aa16.34■□□□□ 0.21
PTCH1-210ENST00000468211 MGST1P10620 155 aaKnown RBP16.34■□□□□ 0.21
PTCH1-210ENST00000468211 PARLQ9H300 379 aa16.34■□□□□ 0.21
PTCH1-210ENST00000468211 ARL2-SNX15V9GYD0 113 aa16.34■□□□□ 0.21
PTCH1-210ENST00000468211 IGLV5-52A0A0A0MRZ9 124 aa16.33■□□□□ 0.2
PTCH1-210ENST00000468211 GIPP09681 153 aaPredicted RBP16.33■□□□□ 0.2
PTCH1-210ENST00000468211 JPT2Q9H910 190 aa16.33■□□□□ 0.2
PTCH1-210ENST00000468211 SRRM2Q9UQ35 2752 aaKnown RBP16.32■□□□□ 0.2
PTCH1-210ENST00000468211 UBE2G2P60604 165 aa16.32■□□□□ 0.2
PTCH1-210ENST00000468211 FRZBQ92765 325 aa16.32■□□□□ 0.2
PTCH1-210ENST00000468211 LINC00694P0DN24 101 aa16.31■□□□□ 0.2
PTCH1-210ENST00000468211 Q8N814 137 aa16.31■□□□□ 0.2
PTCH1-210ENST00000468211 DNAH8Q96JB1 4490 aa16.31■□□□□ 0.2
PTCH1-210ENST00000468211 FXYD6-FXYD2A0A087WZ82 144 aa16.3■□□□□ 0.2
PTCH1-210ENST00000468211 GAGE12JA6NER3 117 aa16.3■□□□□ 0.2
PTCH1-210ENST00000468211 IFNA7P01567 189 aa16.3■□□□□ 0.2
PTCH1-210ENST00000468211 FGF8P55075 233 aaPredicted RBP16.3■□□□□ 0.2
PTCH1-210ENST00000468211 GAGE1Q13065 139 aa16.3■□□□□ 0.2
PTCH1-210ENST00000468211 GAGE4Q13068 117 aa16.3■□□□□ 0.2
PTCH1-210ENST00000468211 GAGE5Q13069 117 aa16.3■□□□□ 0.2
PTCH1-210ENST00000468211 GAGE13Q4V321 117 aa16.3■□□□□ 0.2
PTCH1-210ENST00000468211 INO80EQ8NBZ0 244 aaPredicted RBP16.3■□□□□ 0.2
PTCH1-210ENST00000468211 SAMD10Q9BYL1 202 aa16.3■□□□□ 0.2
PTCH1-210ENST00000468211 CTXND1A0A1B0GTU2 59 aa16.29■□□□□ 0.2
PTCH1-210ENST00000468211 FABP5P3A8MUU1 101 aa16.29■□□□□ 0.2
PTCH1-210ENST00000468211 PEX7O00628 323 aa16.29■□□□□ 0.2
PTCH1-210ENST00000468211 S100A4P26447 101 aaKnown RBP16.29■□□□□ 0.2
PTCH1-210ENST00000468211 CRIP1P50238 77 aa16.29■□□□□ 0.2
PTCH1-210ENST00000468211 WFDC2Q14508 124 aa16.29■□□□□ 0.2
PTCH1-210ENST00000468211 LGALSLQ3ZCW2 172 aaPredicted RBP16.29■□□□□ 0.2
PTCH1-210ENST00000468211 UFSP1Q6NVU6 142 aa16.29■□□□□ 0.2
PTCH1-210ENST00000468211 ZFP2Q6ZN57 461 aa16.29■□□□□ 0.2
PTCH1-210ENST00000468211 Q86TA4 180 aa16.29■□□□□ 0.2
PTCH1-210ENST00000468211 OR2T35Q8NGX2 323 aa16.29■□□□□ 0.2
PTCH1-210ENST00000468211 NTN5Q8WTR8 489 aaPredicted RBP16.29■□□□□ 0.2
PTCH1-210ENST00000468211 BATF3Q9NR55 127 aa16.29■□□□□ 0.2
PTCH1-210ENST00000468211 DMBT1Q9UGM3 2413 aaPredicted RBP16.29■□□□□ 0.2
PTCH1-210ENST00000468211 FLG2Q5D862 2391 aaPredicted RBP16.29■□□□□ 0.2
PTCH1-210ENST00000468211 MYCBP2O75592 4640 aa16.28■□□□□ 0.2
PTCH1-210ENST00000468211 FAM74A7A6NL05 159 aa16.28■□□□□ 0.2
PTCH1-210ENST00000468211 A8MWV9 139 aa16.28■□□□□ 0.2
PTCH1-210ENST00000468211 ASIPP42127 132 aa16.28■□□□□ 0.2
PTCH1-210ENST00000468211 C14orf178Q8N769 122 aaPredicted RBP16.28■□□□□ 0.2
PTCH1-210ENST00000468211 BOLA1Q9Y3E2 137 aa16.28■□□□□ 0.2
PTCH1-210ENST00000468211 BORCS7-ASMTA0A0B4J1R7 106 aa16.27■□□□□ 0.2
PTCH1-210ENST00000468211 G3V3Q6 166 aa16.27■□□□□ 0.2
PTCH1-210ENST00000468211 DMRTA1Q5VZB9 504 aa16.27■□□□□ 0.2
PTCH1-210ENST00000468211 ZC2HC1AQ96GY0 325 aa16.27■□□□□ 0.2
PTCH1-210ENST00000468211 FAM30AQ9NZY2 134 aa16.27■□□□□ 0.2
PTCH1-210ENST00000468211 B4DEV8 164 aa16.26■□□□□ 0.19
PTCH1-210ENST00000468211 H3BVH4 76 aa16.26■□□□□ 0.19
PTCH1-210ENST00000468211 LAGE3Q14657 143 aa16.26■□□□□ 0.19
PTCH1-210ENST00000468211 PIK3CD-AS1Q5SR53 167 aa16.26■□□□□ 0.19
PTCH1-210ENST00000468211 TMEM70Q9BUB7 260 aa16.26■□□□□ 0.19
PTCH1-210ENST00000468211 IL36BQ9NZH7 164 aa16.26■□□□□ 0.19
PTCH1-210ENST00000468211 GRIFINA4D1Z8 144 aa16.24■□□□□ 0.19
PTCH1-210ENST00000468211 KRBOX1C9JBD0 128 aa16.24■□□□□ 0.19
PTCH1-210ENST00000468211 M0R036 132 aa16.24■□□□□ 0.19
PTCH1-210ENST00000468211 DAZ4Q86SG3 579 aaKnown RBP16.24■□□□□ 0.19
PTCH1-210ENST00000468211 DAZ3Q9NR90 486 aaKnown RBP16.24■□□□□ 0.19
PTCH1-210ENST00000468211 SH2D1AO60880 128 aa16.23■□□□□ 0.19
PTCH1-210ENST00000468211 ARMS2P0C7Q2 107 aa16.23■□□□□ 0.19
PTCH1-210ENST00000468211 DNLZQ5SXM8 178 aa16.23■□□□□ 0.19
PTCH1-210ENST00000468211 HIST1H2BAQ96A08 127 aa16.23■□□□□ 0.19
PTCH1-210ENST00000468211 AKR1C8PQ5T2L2 129 aa16.22■□□□□ 0.19
PTCH1-210ENST00000468211 COX8CQ7Z4L0 72 aa16.22■□□□□ 0.19
PTCH1-210ENST00000468211 CYTL1Q9NRR1 136 aa16.22■□□□□ 0.19
PTCH1-210ENST00000468211 LECT2O14960 151 aa16.21■□□□□ 0.19
PTCH1-210ENST00000468211 TM2D2Q9BX73 214 aa16.21■□□□□ 0.19
PTCH1-210ENST00000468211 MAP1LC3B2A6NCE7 125 aa16.2■□□□□ 0.18
PTCH1-210ENST00000468211 NKX6-2Q9C056 277 aaPredicted RBP16.2■□□□□ 0.18
PTCH1-210ENST00000468211 MAP1LC3BQ9GZQ8 125 aa16.2■□□□□ 0.18
PTCH1-210ENST00000468211 FAM229AH3BQW9 127 aa16.19■□□□□ 0.18
PTCH1-210ENST00000468211 FAM74A4Q5TZK3 123 aa16.19■□□□□ 0.18
PTCH1-210ENST00000468211 DNAJC30Q96LL9 226 aa16.19■□□□□ 0.18
PTCH1-210ENST00000468211 ZFP30Q9Y2G7 519 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms