RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 BAXQ07812 192 aa6.35□□□□□ -1.39
HDAC3-203ENST00000467533 MAJINQ3KP22 176 aa6.35□□□□□ -1.39
HDAC3-203ENST00000467533 MPV17L2Q567V2 206 aa6.35□□□□□ -1.39
HDAC3-203ENST00000467533 CLPSL2Q6UWE3 100 aa6.35□□□□□ -1.39
HDAC3-203ENST00000467533 ZFP2Q6ZN57 461 aa6.35□□□□□ -1.39
HDAC3-203ENST00000467533 LINC00299Q6ZSB3 139 aa6.35□□□□□ -1.39
HDAC3-203ENST00000467533 OR2G3Q8NGZ4 309 aa6.35□□□□□ -1.39
HDAC3-203ENST00000467533 LINC00479Q96M42 142 aa6.35□□□□□ -1.39
HDAC3-203ENST00000467533 C9orf85Q96MD7 179 aa6.35□□□□□ -1.39
HDAC3-203ENST00000467533 MIXL1Q9H2W2 232 aa6.35□□□□□ -1.39
HDAC3-203ENST00000467533 IGKV2-24A0A0C4DH68 120 aa6.34□□□□□ -1.39
HDAC3-203ENST00000467533 MUC21A0A0G2JKD1 596 aa6.34□□□□□ -1.39
HDAC3-203ENST00000467533 UBE2L5PA0A1B0GUS4 154 aa6.34□□□□□ -1.39
HDAC3-203ENST00000467533 A8MWV9 139 aa6.34□□□□□ -1.39
HDAC3-203ENST00000467533 STPG4Q8N801 248 aa6.34□□□□□ -1.39
HDAC3-203ENST00000467533 OR10G7Q8NGN6 311 aa6.34□□□□□ -1.39
HDAC3-203ENST00000467533 MCFD2Q8NI22 146 aa6.34□□□□□ -1.39
HDAC3-203ENST00000467533 UQCC1Q9NVA1 299 aa6.34□□□□□ -1.39
HDAC3-203ENST00000467533 RABL2AQ9UBK7 228 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-203ENST00000467533 WDR83OSQ9Y284 106 aa6.34□□□□□ -1.39
HDAC3-203ENST00000467533 A0A087WWL8 130 aa6.33□□□□□ -1.4
HDAC3-203ENST00000467533 CCSO14618 274 aa6.33□□□□□ -1.4
HDAC3-203ENST00000467533 RANP62826 216 aaKnown RBP6.33□□□□□ -1.4
HDAC3-203ENST00000467533 CACNG7P62955 275 aa6.33□□□□□ -1.4
HDAC3-203ENST00000467533 SRSF9Q13242 221 aaKnown RBP eCLIP6.33□□□□□ -1.4
HDAC3-203ENST00000467533 LGALSLQ3ZCW2 172 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-203ENST00000467533 GCSAMLQ5JQS6 135 aa6.33□□□□□ -1.4
HDAC3-203ENST00000467533 LCE2DQ5TA82 110 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-203ENST00000467533 MIR17HGQ75NE6 70 aa6.33□□□□□ -1.4
HDAC3-203ENST00000467533 TMED6Q8WW62 240 aa6.33□□□□□ -1.4
HDAC3-203ENST00000467533 PTH2Q96A98 100 aa6.33□□□□□ -1.4
HDAC3-203ENST00000467533 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 L7N2F9 121 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 CTDSP2O14595 271 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 S100A5P33763 92 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 FAUP35544 74 aaKnown RBP6.32□□□□□ -1.4
HDAC3-203ENST00000467533 BCAP31P51572 246 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 VAMP2P63027 116 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 COX6A2Q02221 97 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 Q6ZRP5 223 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 ZNF664Q8N3J9 261 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 TMEM75Q8N9X5 138 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 FXYD5Q96DB9 178 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 FAM167A-AS1Q96KT0 104 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 HYLS1Q96M11 299 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 TREM1Q9NP99 234 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 PSORS1C2Q9UIG4 136 aa6.32□□□□□ -1.4
HDAC3-203ENST00000467533 C7orf66A4D0T2 115 aa6.31□□□□□ -1.4
HDAC3-203ENST00000467533 CST7O76096 145 aa6.31□□□□□ -1.4
HDAC3-203ENST00000467533 FGF7P21781 194 aa6.31□□□□□ -1.4
HDAC3-203ENST00000467533 IAH1Q2TAA2 248 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-203ENST00000467533 KRTAP26-1Q6PEX3 210 aa6.31□□□□□ -1.4
HDAC3-203ENST00000467533 IGLV10-54A0A075B6I4 117 aa6.3□□□□□ -1.4
HDAC3-203ENST00000467533 OR7C2O60412 319 aa6.3□□□□□ -1.4
HDAC3-203ENST00000467533 NDUFS6O75380 124 aaKnown RBP6.3□□□□□ -1.4
HDAC3-203ENST00000467533 SLPIP03973 132 aa6.3□□□□□ -1.4
HDAC3-203ENST00000467533 RNASE3P12724 160 aaKnown RBP6.3□□□□□ -1.4
HDAC3-203ENST00000467533 UBE2L3P68036 154 aaKnown RBP6.3□□□□□ -1.4
HDAC3-203ENST00000467533 FAM74A4Q5TZK3 123 aa6.3□□□□□ -1.4
HDAC3-203ENST00000467533 CMTM2Q8TAZ6 248 aa6.3□□□□□ -1.4
HDAC3-203ENST00000467533 TVP23CQ96ET8 276 aa6.3□□□□□ -1.4
HDAC3-203ENST00000467533 DIRAS2Q96HU8 199 aa6.3□□□□□ -1.4
HDAC3-203ENST00000467533 CHCHD5Q9BSY4 110 aa6.3□□□□□ -1.4
HDAC3-203ENST00000467533 NMES1Q9C002 83 aa6.3□□□□□ -1.4
HDAC3-203ENST00000467533 JPT2Q9H910 190 aa6.3□□□□□ -1.4
HDAC3-203ENST00000467533 GSKIPQ9P0R6 139 aa6.3□□□□□ -1.4
HDAC3-203ENST00000467533 C11orf21Q9P2W6 132 aa6.3□□□□□ -1.4
HDAC3-203ENST00000467533 TRBV6-8A0A0A6YYG3 113 aa6.29□□□□□ -1.4
HDAC3-203ENST00000467533 RHODO00212 210 aa6.29□□□□□ -1.4
HDAC3-203ENST00000467533 PTTG1O95997 202 aa6.29□□□□□ -1.4
HDAC3-203ENST00000467533 IFNA7P01567 189 aa6.29□□□□□ -1.4
HDAC3-203ENST00000467533 S100A10P60903 97 aa6.29□□□□□ -1.4
HDAC3-203ENST00000467533 PKIAP61925 76 aa6.29□□□□□ -1.4
HDAC3-203ENST00000467533 RPL36AP83881 106 aaKnown RBP6.29□□□□□ -1.4
HDAC3-203ENST00000467533 SPANXN2Q5MJ10 180 aa6.29□□□□□ -1.4
HDAC3-203ENST00000467533 UFSP1Q6NVU6 142 aa6.29□□□□□ -1.4
HDAC3-203ENST00000467533 GOLT1AQ6ZVE7 132 aa6.29□□□□□ -1.4
HDAC3-203ENST00000467533 LINC00269Q8N2A0 174 aa6.29□□□□□ -1.4
HDAC3-203ENST00000467533 PRR26Q8N8Z3 221 aa6.29□□□□□ -1.4
HDAC3-203ENST00000467533 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
HDAC3-203ENST00000467533 SLC25A21Q9BQT8 299 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-203ENST00000467533 NDFIP1Q9BT67 221 aa6.29□□□□□ -1.4
HDAC3-203ENST00000467533 C9orf170A2RU37 121 aa6.28□□□□□ -1.4
HDAC3-203ENST00000467533 S100A4P26447 101 aaKnown RBP6.28□□□□□ -1.4
HDAC3-203ENST00000467533 UBE2D3P61077 147 aa6.28□□□□□ -1.4
HDAC3-203ENST00000467533 UBE2D2P62837 147 aa6.28□□□□□ -1.4
HDAC3-203ENST00000467533 PRSS3P2Q8NHM4 247 aa6.28□□□□□ -1.4
HDAC3-203ENST00000467533 CHAC2Q8WUX2 184 aa6.28□□□□□ -1.4
HDAC3-203ENST00000467533 S100ZQ8WXG8 99 aa6.28□□□□□ -1.4
HDAC3-203ENST00000467533 PRR34Q9NV39 138 aa6.28□□□□□ -1.4
HDAC3-203ENST00000467533 FAM24AA6NFZ4 105 aa6.27□□□□□ -1.41
HDAC3-203ENST00000467533 MBPP02686 304 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-203ENST00000467533 ZNF80P51504 273 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-203ENST00000467533 PIK3CD-AS1Q5SR53 167 aa6.27□□□□□ -1.41
HDAC3-203ENST00000467533 NPCDR1Q9BY65 106 aa6.27□□□□□ -1.41
HDAC3-203ENST00000467533 LYRM2Q9NU23 88 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-203ENST00000467533 LSM5Q9Y4Y9 91 aaKnown RBP6.27□□□□□ -1.41
HDAC3-203ENST00000467533 TRBV7-3A0A075B6L6 115 aa6.26□□□□□ -1.41
HDAC3-203ENST00000467533 A0A096LNI7 61 aa6.26□□□□□ -1.41
HDAC3-203ENST00000467533 GCGP01275 180 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms