RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 CXorf51AA0A1B0GTR3 108 aa0.93□□□□□ -2.26
PRPF40A-205ENST00000467114 NPFFO15130 113 aa0.93□□□□□ -2.26
PRPF40A-205ENST00000467114 TFF1P04155 84 aa0.93□□□□□ -2.26
PRPF40A-205ENST00000467114 COPZ1P61923 177 aa0.93□□□□□ -2.26
PRPF40A-205ENST00000467114 RPS25P62851 125 aaKnown RBP0.93□□□□□ -2.26
PRPF40A-205ENST00000467114 C5orf56Q8N8D9 126 aa0.93□□□□□ -2.26
PRPF40A-205ENST00000467114 TPT1P8Q9HAU6 139 aa0.93□□□□□ -2.26
PRPF40A-205ENST00000467114 PAIP2BQ9ULR5 123 aaKnown RBP0.93□□□□□ -2.26
PRPF40A-205ENST00000467114 PRG4Q92954 1404 aaPredicted RBP0.92□□□□□ -2.26
PRPF40A-205ENST00000467114 APOC1P02654 83 aa0.92□□□□□ -2.26
PRPF40A-205ENST00000467114 SLC25A6P12236 298 aa0.92□□□□□ -2.26
PRPF40A-205ENST00000467114 PRB3Q04118 309 aaPredicted RBP0.92□□□□□ -2.26
PRPF40A-205ENST00000467114 ATOH7Q8N100 152 aa0.92□□□□□ -2.26
PRPF40A-205ENST00000467114 PLAC4Q8WY50 150 aa0.92□□□□□ -2.26
PRPF40A-205ENST00000467114 ERCC6Q03468 1493 aa0.92□□□□□ -2.26
PRPF40A-205ENST00000467114 ZCCHC6Q5VYS8 1495 aaKnown RBP0.92□□□□□ -2.26
PRPF40A-205ENST00000467114 TENM3Q9P273 2699 aa0.92□□□□□ -2.26
PRPF40A-205ENST00000467114 K7EIL1 84 aa0.91□□□□□ -2.26
PRPF40A-205ENST00000467114 ZNF56Q15929 161 aa0.91□□□□□ -2.26
PRPF40A-205ENST00000467114 MIC13Q5XKP0 118 aa0.91□□□□□ -2.26
PRPF40A-205ENST00000467114 VIRMAQ69YN4 1812 aaKnown RBP0.9□□□□□ -2.27
PRPF40A-205ENST00000467114 ZNF670-ZNF695F2Z2N8 137 aa0.9□□□□□ -2.27
PRPF40A-205ENST00000467114 FXYD1O00168 92 aa0.9□□□□□ -2.27
PRPF40A-205ENST00000467114 C10orf99Q6UWK7 81 aa0.9□□□□□ -2.27
PRPF40A-205ENST00000467114 ERG28Q9UKR5 140 aa0.9□□□□□ -2.27
PRPF40A-205ENST00000467114 ATG2AQ2TAZ0 1938 aa0.89□□□□□ -2.27
PRPF40A-205ENST00000467114 MYH13Q9UKX3 1938 aa0.89□□□□□ -2.27
PRPF40A-205ENST00000467114 CASZ1Q86V15 1759 aa0.89□□□□□ -2.27
PRPF40A-205ENST00000467114 CCDC179H3BU77 68 aa0.89□□□□□ -2.27
PRPF40A-205ENST00000467114 NDUFA2O43678 99 aa0.89□□□□□ -2.27
PRPF40A-205ENST00000467114 SPINT3P49223 89 aa0.89□□□□□ -2.27
PRPF40A-205ENST00000467114 SPINK9Q5DT21 86 aa0.89□□□□□ -2.27
PRPF40A-205ENST00000467114 LINC01545Q5VT33 79 aa0.89□□□□□ -2.27
PRPF40A-205ENST00000467114 VSTM2AQ8TAG5 236 aa0.89□□□□□ -2.27
PRPF40A-205ENST00000467114 TSC22D3Q99576 134 aa0.89□□□□□ -2.27
PRPF40A-205ENST00000467114 PSMG3Q9BT73 122 aaPredicted RBP0.89□□□□□ -2.27
PRPF40A-205ENST00000467114 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
PRPF40A-205ENST00000467114 CDK12Q9NYV4 1490 aaPredicted RBP0.88□□□□□ -2.27
PRPF40A-205ENST00000467114 CPDO75976 1380 aa0.88□□□□□ -2.27
PRPF40A-205ENST00000467114 PITX3O75364 302 aa0.88□□□□□ -2.27
PRPF40A-205ENST00000467114 PYYP10082 97 aa0.88□□□□□ -2.27
PRPF40A-205ENST00000467114 RRAS2P62070 204 aaPredicted RBP0.88□□□□□ -2.27
PRPF40A-205ENST00000467114 Q6ZUT4 128 aa0.88□□□□□ -2.27
PRPF40A-205ENST00000467114 NDUFA11Q86Y39 141 aa0.88□□□□□ -2.27
PRPF40A-205ENST00000467114 IFI27L1Q96BM0 104 aa0.88□□□□□ -2.27
PRPF40A-205ENST00000467114 SPAG17Q6Q759 2223 aa0.88□□□□□ -2.27
PRPF40A-205ENST00000467114 ZDBF2Q9HCK1 2354 aa0.88□□□□□ -2.27
PRPF40A-205ENST00000467114 TEX49A0A1B0GTD5 131 aa0.87□□□□□ -2.27
PRPF40A-205ENST00000467114 FXYD6P3P58550 94 aa0.87□□□□□ -2.27
PRPF40A-205ENST00000467114 SPCS2Q15005 226 aa0.87□□□□□ -2.27
PRPF40A-205ENST00000467114 OR2T2Q6IF00 324 aa0.87□□□□□ -2.27
PRPF40A-205ENST00000467114 SCIMPQ6UWF3 145 aa0.87□□□□□ -2.27
PRPF40A-205ENST00000467114 TMEM141Q96I45 108 aa0.87□□□□□ -2.27
PRPF40A-205ENST00000467114 NDUFA12Q9UI09 145 aa0.87□□□□□ -2.27
PRPF40A-205ENST00000467114 TCRBV3S1A0A5B6 114 aa0.86□□□□□ -2.27
PRPF40A-205ENST00000467114 LY6G6CO95867 125 aa0.86□□□□□ -2.27
PRPF40A-205ENST00000467114 PIRTP0C851 137 aa0.86□□□□□ -2.27
PRPF40A-205ENST00000467114 GUCA1AP43080 201 aaPredicted RBP0.86□□□□□ -2.27
PRPF40A-205ENST00000467114 SARNPP82979 210 aaKnown RBP0.86□□□□□ -2.27
PRPF40A-205ENST00000467114 KLKP1Q107X0 134 aa0.86□□□□□ -2.27
PRPF40A-205ENST00000467114 SPINK13Q1W4C9 94 aa0.86□□□□□ -2.27
PRPF40A-205ENST00000467114 SPANXN1Q5VSR9 72 aa0.86□□□□□ -2.27
PRPF40A-205ENST00000467114 KCNRGQ8N5I3 272 aa0.86□□□□□ -2.27
PRPF40A-205ENST00000467114 TSKUQ8WUA8 353 aa0.86□□□□□ -2.27
PRPF40A-205ENST00000467114 SDF2Q99470 211 aa0.86□□□□□ -2.27
PRPF40A-205ENST00000467114 TMEM191AQ9H0A3 160 aa0.86□□□□□ -2.27
PRPF40A-205ENST00000467114 MYH6P13533 1939 aa0.85□□□□□ -2.27
PRPF40A-205ENST00000467114 ZNF137PP52743 207 aa0.85□□□□□ -2.27
PRPF40A-205ENST00000467114 BLMP54132 1417 aaPredicted RBP0.85□□□□□ -2.27
PRPF40A-205ENST00000467114 SELENOWP63302 87 aa0.85□□□□□ -2.27
PRPF40A-205ENST00000467114 C6orf52Q5T4I8 152 aa0.85□□□□□ -2.27
PRPF40A-205ENST00000467114 PPP1R1CQ8WVI7 109 aa0.85□□□□□ -2.27
PRPF40A-205ENST00000467114 COA4Q9NYJ1 87 aa0.85□□□□□ -2.27
PRPF40A-205ENST00000467114 AFDNP55196 1824 aaKnown RBP0.85□□□□□ -2.27
PRPF40A-205ENST00000467114 DLEC1Q9Y238 1755 aa0.84□□□□□ -2.27
PRPF40A-205ENST00000467114 IL5P05113 134 aa0.84□□□□□ -2.27
PRPF40A-205ENST00000467114 CYP2G1PQ6ZSU1 146 aa0.84□□□□□ -2.27
PRPF40A-205ENST00000467114 TMEM14BQ9NUH8 114 aa0.84□□□□□ -2.27
PRPF40A-205ENST00000467114 TMEM242Q9NWH2 141 aa0.84□□□□□ -2.27
PRPF40A-205ENST00000467114 BET1LQ9NYM9 111 aa0.84□□□□□ -2.27
PRPF40A-205ENST00000467114 CCDC167Q9P0B6 97 aa0.84□□□□□ -2.27
PRPF40A-205ENST00000467114 RREB1Q92766 1687 aa0.84□□□□□ -2.28
PRPF40A-205ENST00000467114 PLXNA2O75051 1894 aa0.84□□□□□ -2.28
PRPF40A-205ENST00000467114 BICRAQ9NZM4 1560 aa0.83□□□□□ -2.28
PRPF40A-205ENST00000467114 NPC2P61916 151 aa0.83□□□□□ -2.28
PRPF40A-205ENST00000467114 RPL7L1Q6DKI1 246 aaKnown RBP0.83□□□□□ -2.28
PRPF40A-205ENST00000467114 SLC48A1Q6P1K1 146 aa0.83□□□□□ -2.28
PRPF40A-205ENST00000467114 ARL11Q969Q4 196 aa0.83□□□□□ -2.28
PRPF40A-205ENST00000467114 DPH3Q96FX2 82 aa0.83□□□□□ -2.28
PRPF40A-205ENST00000467114 PTPRMP28827 1452 aa0.83□□□□□ -2.28
PRPF40A-205ENST00000467114 ADGRB1O14514 1584 aa0.83□□□□□ -2.28
PRPF40A-205ENST00000467114 TRAV12-2A0A075B6T6 113 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 TRAV12-3A0A0B4J271 114 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 A0A0D9SG42 100 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 A6NIN4 97 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 FAM25AB3EWG3 89 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 FAM25CB3EWG5 89 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 FAM25GB3EWG6 89 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 K7EP13 123 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 GNG7O60262 68 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms