RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 SERTM2A0A1B0GWG4 89 aa13.6□□□□□ -0.23
CPSF7-209ENST00000463244 GAGE12JA6NER3 117 aa13.6□□□□□ -0.23
CPSF7-209ENST00000463244 GGTLC3B5MD39 225 aa13.6□□□□□ -0.23
CPSF7-209ENST00000463244 GCGP01275 180 aa13.6□□□□□ -0.23
CPSF7-209ENST00000463244 RNASE3P12724 160 aaKnown RBP13.6□□□□□ -0.23
CPSF7-209ENST00000463244 GAGE1Q13065 139 aa13.6□□□□□ -0.23
CPSF7-209ENST00000463244 GAGE4Q13068 117 aa13.6□□□□□ -0.23
CPSF7-209ENST00000463244 GAGE5Q13069 117 aa13.6□□□□□ -0.23
CPSF7-209ENST00000463244 GAGE13Q4V321 117 aa13.6□□□□□ -0.23
CPSF7-209ENST00000463244 SMIM3Q9BZL3 60 aa13.6□□□□□ -0.23
CPSF7-209ENST00000463244 A0A1W2PPV4 95 aa13.59□□□□□ -0.23
CPSF7-209ENST00000463244 RBFOX3A6NFN3 312 aa13.59□□□□□ -0.23
CPSF7-209ENST00000463244 H2BFSP57053 126 aa13.59□□□□□ -0.23
CPSF7-209ENST00000463244 ACOT6Q3I5F7 207 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-209ENST00000463244 ZFP2Q6ZN57 461 aa13.59□□□□□ -0.23
CPSF7-209ENST00000463244 Q8N976 141 aa13.59□□□□□ -0.23
CPSF7-209ENST00000463244 PARLQ9H300 379 aa13.59□□□□□ -0.23
CPSF7-209ENST00000463244 RAB2AP61019 212 aa13.58□□□□□ -0.24
CPSF7-209ENST00000463244 CIRBP-AS1Q8TBR5 109 aa13.58□□□□□ -0.24
CPSF7-209ENST00000463244 A0A087WWC5 75 aa13.57□□□□□ -0.24
CPSF7-209ENST00000463244 RNF222A6NCQ9 220 aa13.57□□□□□ -0.24
CPSF7-209ENST00000463244 HMGB3O15347 200 aaKnown RBP13.57□□□□□ -0.24
CPSF7-209ENST00000463244 TCRAP04437 139 aa13.57□□□□□ -0.24
CPSF7-209ENST00000463244 CYB561D1Q8N8Q1 229 aa13.57□□□□□ -0.24
CPSF7-209ENST00000463244 C5orf17Q8NAS9 161 aa13.57□□□□□ -0.24
CPSF7-209ENST00000463244 RMI2Q96E14 147 aa13.57□□□□□ -0.24
CPSF7-209ENST00000463244 Q9UF83 564 aa13.57□□□□□ -0.24
CPSF7-209ENST00000463244 PSG8Q9UQ74 426 aa13.57□□□□□ -0.24
CPSF7-209ENST00000463244 A8MWV9 139 aa13.56□□□□□ -0.24
CPSF7-209ENST00000463244 MPC2O95563 127 aa13.56□□□□□ -0.24
CPSF7-209ENST00000463244 IGLV2-11P01706 119 aa13.56□□□□□ -0.24
CPSF7-209ENST00000463244 RPL12P30050 165 aaKnown RBP13.56□□□□□ -0.24
CPSF7-209ENST00000463244 PIK3CD-AS1Q5SR53 167 aa13.56□□□□□ -0.24
CPSF7-209ENST00000463244 DNAJC30Q96LL9 226 aa13.56□□□□□ -0.24
CPSF7-209ENST00000463244 LINC00479Q96M42 142 aa13.56□□□□□ -0.24
CPSF7-209ENST00000463244 WFDC1Q9HC57 220 aa13.56□□□□□ -0.24
CPSF7-209ENST00000463244 PLA2G2DQ9UNK4 145 aa13.56□□□□□ -0.24
CPSF7-209ENST00000463244 PET100P0DJ07 73 aa13.55□□□□□ -0.24
CPSF7-209ENST00000463244 ARL14EPLP0DKL9 152 aa13.55□□□□□ -0.24
CPSF7-209ENST00000463244 ZFP69Q49AA0 526 aa13.55□□□□□ -0.24
CPSF7-209ENST00000463244 SMUG1Q53HV7 270 aa13.55□□□□□ -0.24
CPSF7-209ENST00000463244 OR2T35Q8NGX2 323 aa13.55□□□□□ -0.24
CPSF7-209ENST00000463244 ENKURQ8TC29 256 aa13.55□□□□□ -0.24
CPSF7-209ENST00000463244 IGKV2D-24A0A075B6R9 120 aa13.54□□□□□ -0.24
CPSF7-209ENST00000463244 K7EQM0 130 aa13.54□□□□□ -0.24
CPSF7-209ENST00000463244 FGF8P55075 233 aaPredicted RBP13.54□□□□□ -0.24
CPSF7-209ENST00000463244 UFSP1Q6NVU6 142 aa13.54□□□□□ -0.24
CPSF7-209ENST00000463244 OR10G9Q8NGN4 311 aa13.54□□□□□ -0.24
CPSF7-209ENST00000463244 OR10G7Q8NGN6 311 aa13.54□□□□□ -0.24
CPSF7-209ENST00000463244 SAMD10Q9BYL1 202 aa13.54□□□□□ -0.24
CPSF7-209ENST00000463244 IGLV2-8P01709 118 aa13.53□□□□□ -0.24
CPSF7-209ENST00000463244 FLI1Q01543 452 aaPredicted RBP13.53□□□□□ -0.24
CPSF7-209ENST00000463244 LGALSLQ3ZCW2 172 aaPredicted RBP13.53□□□□□ -0.24
CPSF7-209ENST00000463244 NIT1Q86X76 327 aa13.53□□□□□ -0.24
CPSF7-209ENST00000463244 C14orf178Q8N769 122 aaPredicted RBP13.53□□□□□ -0.24
CPSF7-209ENST00000463244 URGCP-MRPS24S4R325 110 aa13.53□□□□□ -0.24
CPSF7-209ENST00000463244 SEC11BP0C7V7 166 aa13.52□□□□□ -0.25
CPSF7-209ENST00000463244 STAG3L2P0CL84 134 aa13.52□□□□□ -0.25
CPSF7-209ENST00000463244 STAG3L3P0CL85 134 aa13.52□□□□□ -0.25
CPSF7-209ENST00000463244 PRNTQ86SH4 94 aa13.52□□□□□ -0.25
CPSF7-209ENST00000463244 SUN5Q8TC36 379 aa13.52□□□□□ -0.25
CPSF7-209ENST00000463244 JPT2Q9H910 190 aa13.52□□□□□ -0.25
CPSF7-209ENST00000463244 KLK12Q9UKR0 248 aa13.52□□□□□ -0.25
CPSF7-209ENST00000463244 IGKV3D-20A0A0C4DH25 116 aa13.51□□□□□ -0.25
CPSF7-209ENST00000463244 S100A4P26447 101 aaKnown RBP13.51□□□□□ -0.25
CPSF7-209ENST00000463244 CDC34P49427 236 aaPredicted RBP13.51□□□□□ -0.25
CPSF7-209ENST00000463244 INMT-MINDY4F8WBC2 141 aa13.5□□□□□ -0.25
CPSF7-209ENST00000463244 UBE2WQ96B02 151 aa13.5□□□□□ -0.25
CPSF7-209ENST00000463244 EPDR1Q9UM22 224 aa13.5□□□□□ -0.25
CPSF7-209ENST00000463244 GCHFRP30047 84 aa13.49□□□□□ -0.25
CPSF7-209ENST00000463244 SUMO1P63165 101 aaKnown RBP13.49□□□□□ -0.25
CPSF7-209ENST00000463244 SAPCD1Q5SSQ6 148 aa13.49□□□□□ -0.25
CPSF7-209ENST00000463244 ATRAIDQ6UW56 229 aa13.49□□□□□ -0.25
CPSF7-209ENST00000463244 NDUFA13Q9P0J0 144 aa13.49□□□□□ -0.25
CPSF7-209ENST00000463244 ASIPP42127 132 aa13.48□□□□□ -0.25
CPSF7-209ENST00000463244 LINC00299Q6ZSB3 139 aa13.48□□□□□ -0.25
CPSF7-209ENST00000463244 CHCHD7Q9BUK0 85 aa13.48□□□□□ -0.25
CPSF7-209ENST00000463244 IL36BQ9NZH7 164 aa13.48□□□□□ -0.25
CPSF7-209ENST00000463244 RHODO00212 210 aa13.47□□□□□ -0.25
CPSF7-209ENST00000463244 DMRTA1Q5VZB9 504 aa13.47□□□□□ -0.25
CPSF7-209ENST00000463244 OR2G3Q8NGZ4 309 aa13.47□□□□□ -0.25
CPSF7-209ENST00000463244 S100ZQ8WXG8 99 aa13.47□□□□□ -0.25
CPSF7-209ENST00000463244 RAB24Q969Q5 203 aa13.47□□□□□ -0.25
CPSF7-209ENST00000463244 A0A087WX48 190 aa13.46□□□□□ -0.25
CPSF7-209ENST00000463244 SSNA1O43805 119 aa13.46□□□□□ -0.25
CPSF7-209ENST00000463244 ELOBQ15370 118 aa13.46□□□□□ -0.25
CPSF7-209ENST00000463244 FABP5P3A8MUU1 101 aa13.45□□□□□ -0.26
CPSF7-209ENST00000463244 H3BVH4 76 aa13.45□□□□□ -0.26
CPSF7-209ENST00000463244 UPK1BO75841 260 aa13.45□□□□□ -0.26
CPSF7-209ENST00000463244 RPL37AP61513 92 aaKnown RBP13.45□□□□□ -0.26
CPSF7-209ENST00000463244 Q0VG73 95 aa13.45□□□□□ -0.26
CPSF7-209ENST00000463244 C14orf177Q52M58 125 aa13.45□□□□□ -0.26
CPSF7-209ENST00000463244 MARVELD1Q9BSK0 173 aa13.45□□□□□ -0.26
CPSF7-209ENST00000463244 TMEM167BQ9NRX6 74 aa13.45□□□□□ -0.26
CPSF7-209ENST00000463244 FAM74A4Q5TZK3 123 aa13.44□□□□□ -0.26
CPSF7-209ENST00000463244 ARL2-SNX15V9GYD0 113 aa13.44□□□□□ -0.26
CPSF7-209ENST00000463244 TRAV34A0A0B4J273 112 aa13.43□□□□□ -0.26
CPSF7-209ENST00000463244 HNRNPA3P51991 378 aaKnown RBP13.43□□□□□ -0.26
CPSF7-209ENST00000463244 IFITM3Q01628 133 aa13.43□□□□□ -0.26
CPSF7-209ENST00000463244 DNLZQ5SXM8 178 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms