RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 TRAV1-1A0A0B4J248 108 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 IGLL5B9A064 214 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 IGLV2-11P01706 119 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 ATP5G1P05496 136 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 TRGC1P0CF51 173 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 FABP4P15090 132 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 ATP5G3P48201 142 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 COA6Q5JTJ3 125 aaKnown RBP8.41□□□□□ -1.06
VPS52-213ENST00000461743 SAPCD1Q5SSQ6 148 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 LGALS9CQ6DKI2 356 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 FAM159AQ6UWV7 190 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 TMEM183AQ8IXX5 376 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 C18orf15Q96N68 181 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 HIST1H2BLQ99880 126 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 CTDSP1Q9GZU7 261 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 MANBALQ9NQG1 85 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 TP53TG3Q9ULZ0 132 aa8.41□□□□□ -1.06
VPS52-213ENST00000461743 HYDINQ4G0P3 5121 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 TRBV6-1A0A0K0K1D8 114 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 PHOX2AO14813 284 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 GCGP01275 180 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 TRGC2P03986 189 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 DEFB130BP0DP73 79 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 DEFB130AP0DP74 79 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 LGALS9BQ3B8N2 356 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 Q86TA4 180 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 FRZBQ92765 325 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 FMC1Q96HJ9 113 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 KCNS1Q96KK3 526 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 TXNDC17Q9BRA2 123 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 PRO1933Q9H354 126 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 APLNQ9ULZ1 77 aa8.4□□□□□ -1.06
VPS52-213ENST00000461743 NACAE9PAV3 2078 aa8.39□□□□□ -1.07
VPS52-213ENST00000461743 ZNF727A8MUV8 499 aa8.39□□□□□ -1.07
VPS52-213ENST00000461743 SPINK4O60575 86 aa8.39□□□□□ -1.07
VPS52-213ENST00000461743 PFN1P07737 140 aaKnown RBP8.39□□□□□ -1.07
VPS52-213ENST00000461743 UBE2G1P62253 170 aa8.39□□□□□ -1.07
VPS52-213ENST00000461743 CST9LP1Q5W188 147 aa8.39□□□□□ -1.07
VPS52-213ENST00000461743 C15orf53Q8NAA6 179 aa8.39□□□□□ -1.07
VPS52-213ENST00000461743 SDF2L1Q9HCN8 221 aa8.39□□□□□ -1.07
VPS52-213ENST00000461743 ZFP30Q9Y2G7 519 aa8.39□□□□□ -1.07
VPS52-213ENST00000461743 KLF12Q9Y4X4 402 aa8.39□□□□□ -1.07
VPS52-213ENST00000461743 PAGE4O60829 102 aa8.38□□□□□ -1.07
VPS52-213ENST00000461743 COX8CQ7Z4L0 72 aa8.38□□□□□ -1.07
VPS52-213ENST00000461743 PRNTQ86SH4 94 aa8.38□□□□□ -1.07
VPS52-213ENST00000461743 SPXQ9BT56 116 aa8.38□□□□□ -1.07
VPS52-213ENST00000461743 LY6G6CO95867 125 aa8.37□□□□□ -1.07
VPS52-213ENST00000461743 IFNA1P01562 189 aa8.37□□□□□ -1.07
VPS52-213ENST00000461743 GZMBP10144 247 aa8.37□□□□□ -1.07
VPS52-213ENST00000461743 HTN3P15516 51 aa8.37□□□□□ -1.07
VPS52-213ENST00000461743 CCL20P78556 96 aa8.37□□□□□ -1.07
VPS52-213ENST00000461743 TMEM183BQ1AE95 376 aa8.37□□□□□ -1.07
VPS52-213ENST00000461743 MUC21Q5SSG8 566 aa8.37□□□□□ -1.07
VPS52-213ENST00000461743 SGK494Q96LW2 274 aa8.37□□□□□ -1.07
VPS52-213ENST00000461743 C8orf49Q96NF6 230 aa8.37□□□□□ -1.07
VPS52-213ENST00000461743 VAX2Q9UIW0 290 aa8.37□□□□□ -1.07
VPS52-213ENST00000461743 TRGV1A0A0A0MS02 117 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 A0A1B0GV50 99 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 GAGE12BA1L429 117 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 GAGE7O76087 117 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 LTAP01374 205 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 GAGE12FP0CL80 117 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 GAGE12GP0CL81 117 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 GAGE12IP0CL82 117 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 P0DMU3 169 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 FAM231AP0DMU4 169 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 FAM231CP0DMU5 169 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 PDZD11Q5EBL8 140 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 Q6ZQT7 251 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 Q6ZTI0 123 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 NAGKQ9UJ70 344 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 CBY1Q9Y3M2 126 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 URGCP-MRPS24S4R325 110 aa8.36□□□□□ -1.07
VPS52-213ENST00000461743 TRGV2A0A075B6R0 118 aa8.35□□□□□ -1.07
VPS52-213ENST00000461743 TRAV34A0A0B4J273 112 aa8.35□□□□□ -1.07
VPS52-213ENST00000461743 IGHV3-16A0A0C4DH30 117 aa8.35□□□□□ -1.07
VPS52-213ENST00000461743 F5H768 121 aa8.35□□□□□ -1.07
VPS52-213ENST00000461743 H3BNG1 76 aa8.35□□□□□ -1.07
VPS52-213ENST00000461743 EREGO14944 169 aa8.35□□□□□ -1.07
VPS52-213ENST00000461743 TYMSP04818 313 aa8.35□□□□□ -1.07
VPS52-213ENST00000461743 BCL2P10415 239 aa8.35□□□□□ -1.07
VPS52-213ENST00000461743 GAGE1Q13065 139 aa8.35□□□□□ -1.07
VPS52-213ENST00000461743 IQCJQ1A5X6 159 aa8.35□□□□□ -1.07
VPS52-213ENST00000461743 ZNF664Q8N3J9 261 aa8.35□□□□□ -1.07
VPS52-213ENST00000461743 C11orf52Q96A22 123 aa8.35□□□□□ -1.07
VPS52-213ENST00000461743 LINC00479Q96M42 142 aa8.35□□□□□ -1.07
VPS52-213ENST00000461743 SCO2A0A1W2PP80 73 aa8.34□□□□□ -1.07
VPS52-213ENST00000461743 M0R143 59 aa8.34□□□□□ -1.07
VPS52-213ENST00000461743 ZNF80P51504 273 aaPredicted RBP8.34□□□□□ -1.07
VPS52-213ENST00000461743 RASL10AQ92737 203 aa8.34□□□□□ -1.07
VPS52-213ENST00000461743 TMEM18Q96B42 140 aa8.34□□□□□ -1.07
VPS52-213ENST00000461743 MDFICQ9P1T7 246 aa8.34□□□□□ -1.07
VPS52-213ENST00000461743 GNG13Q9P2W3 67 aa8.34□□□□□ -1.07
VPS52-213ENST00000461743 FRAS1Q86XX4 4008 aa8.33□□□□□ -1.08
VPS52-213ENST00000461743 FABP5P3A8MUU1 101 aa8.33□□□□□ -1.08
VPS52-213ENST00000461743 M0R2P5 195 aa8.33□□□□□ -1.08
VPS52-213ENST00000461743 PDE6DO43924 150 aa8.33□□□□□ -1.08
VPS52-213ENST00000461743 LINC00614P0C842 121 aa8.33□□□□□ -1.08
VPS52-213ENST00000461743 CEBPGP53567 150 aa8.33□□□□□ -1.08
VPS52-213ENST00000461743 MEF2BQ02080 365 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms