RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 OBSCN-AS1Q96MR7 158 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 MRPL57Q9BQC6 102 aaKnown RBP1.14□□□□□ -2.23
VBP1-202ENST00000460509 PDCD10Q9BUL8 212 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 ALPK3Q96L96 1907 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 KIF13AQ9H1H9 1805 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 TECTAO75443 2155 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 MCM3APO60318 1980 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 PLXNA2O75051 1894 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 HELZP42694 1942 aaKnown RBP1.13□□□□□ -2.23
VBP1-202ENST00000460509 CDK12Q9NYV4 1490 aaPredicted RBP1.13□□□□□ -2.23
VBP1-202ENST00000460509 CXorf51AA0A1B0GTR3 108 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 NUPR2A6NF83 97 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 F6UZH7 168 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 CORTO00230 105 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 DNAL4O96015 105 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 IGHV3-30P01768 117 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 IGKCP01834 107 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 IGHV3-30-5P0DP03 117 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 S100PP25815 95 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 RHOHQ15669 191 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 PPDPFLQ8WWR9 84 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 PSMG3Q9BT73 122 aaPredicted RBP1.13□□□□□ -2.23
VBP1-202ENST00000460509 RERGLQ9H628 205 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 SCN3BQ9NY72 215 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 TANC2Q9HCD6 1990 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 ROS1P08922 2347 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 ATG2AQ2TAZ0 1938 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 ALPK2Q86TB3 2170 aa1.13□□□□□ -2.23
VBP1-202ENST00000460509 KIAA1549Q9HCM3 1950 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 LAMB1P07942 1786 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 IGLV3-32A0A0A0MS00 114 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 TMEM30CPA0ZSE6 113 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 POLR2JP52435 117 aaKnown RBP1.12□□□□□ -2.23
VBP1-202ENST00000460509 PRB3Q04118 309 aaPredicted RBP1.12□□□□□ -2.23
VBP1-202ENST00000460509 GDF5OSQ5U4N7 250 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 LYPD5Q6UWN5 251 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 PLPP5Q8NEB5 264 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 LSM10Q969L4 123 aaKnown RBP1.12□□□□□ -2.23
VBP1-202ENST00000460509 AGPAT4-IT1Q9H0P7 198 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 TMEM14CQ9P0S9 112 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 GNG8Q9UK08 70 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 BOKQ9UMX3 212 aaPredicted RBP1.12□□□□□ -2.23
VBP1-202ENST00000460509 AKAP11Q9UKA4 1901 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 E9PCH4 1651 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 CACNA1BQ00975 2339 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 MRC2Q9UBG0 1479 aa1.12□□□□□ -2.23
VBP1-202ENST00000460509 ZNF142P52746 1687 aaPredicted RBP1.11□□□□□ -2.23
VBP1-202ENST00000460509 TRAV17A0A0B4J275 112 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 KLF7O75840 302 aaPredicted RBP1.11□□□□□ -2.23
VBP1-202ENST00000460509 SLC25A6P12236 298 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 IL7P13232 177 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 HIST1H1DP16402 221 aaKnown RBP1.11□□□□□ -2.23
VBP1-202ENST00000460509 Q6AWC8 147 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 OR2T2Q6IF00 324 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 SBSPONQ8IVN8 264 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 LINC00526Q96FQ7 95 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 C12orf57Q99622 126 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 SEC11CQ9BY50 192 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 NAA60Q9H7X0 242 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 NDUFA12Q9UI09 145 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 SERP1Q9Y6X1 66 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 PZPP20742 1482 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 PTPRFP10586 1907 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 MYH6P13533 1939 aa1.11□□□□□ -2.23
VBP1-202ENST00000460509 ZFC3H1O60293 1989 aaKnown RBP1.1□□□□□ -2.23
VBP1-202ENST00000460509 PEAK1Q9H792 1746 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 DAPK1P53355 1430 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 TRBV10-1A0A0K0K1A3 114 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 ATP6V1G2-DDX39BF2Z307 99 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 GYPBP06028 91 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 PIRTP0C851 137 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 AKAIN1P0CW23 69 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 PRB4P10163 310 aaPredicted RBP1.1□□□□□ -2.23
VBP1-202ENST00000460509 GNG4P50150 75 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 SPANXN1Q5VSR9 72 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 Q6ZS92 163 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 DEFB132Q7Z7B7 95 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 COPS9Q8WXC6 57 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 DMAC1Q96GE9 116 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 C14orf144Q96I85 54 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 WFDC10AQ9H1F0 79 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 TMEM242Q9NWH2 141 aa1.1□□□□□ -2.23
VBP1-202ENST00000460509 MUC22E2RYF6 1773 aaPredicted RBP1.1□□□□□ -2.23
VBP1-202ENST00000460509 EML5Q05BV3 1969 aa1.09□□□□□ -2.23
VBP1-202ENST00000460509 NDUFB6O95139 128 aa1.09□□□□□ -2.23
VBP1-202ENST00000460509 TNFP01375 233 aa1.09□□□□□ -2.23
VBP1-202ENST00000460509 IL5P05113 134 aa1.09□□□□□ -2.23
VBP1-202ENST00000460509 RPL37AP61513 92 aaKnown RBP1.09□□□□□ -2.23
VBP1-202ENST00000460509 MRPS10P82664 201 aaKnown RBP1.09□□□□□ -2.23
VBP1-202ENST00000460509 SPATA45Q537H7 98 aa1.09□□□□□ -2.23
VBP1-202ENST00000460509 SLC48A1Q6P1K1 146 aa1.09□□□□□ -2.23
VBP1-202ENST00000460509 UNQ5815/PRO19632Q6UWF5 114 aa1.09□□□□□ -2.23
VBP1-202ENST00000460509 SPTSSAQ969W0 71 aa1.09□□□□□ -2.23
VBP1-202ENST00000460509 TCEAL7Q9BRU2 100 aa1.09□□□□□ -2.23
VBP1-202ENST00000460509 MRPL35Q9NZE8 188 aaKnown RBP1.09□□□□□ -2.23
VBP1-202ENST00000460509 MRPL36Q9P0J6 103 aaKnown RBP1.09□□□□□ -2.23
VBP1-202ENST00000460509 TRPM7Q96QT4 1865 aa1.09□□□□□ -2.24
VBP1-202ENST00000460509 ZFYVE16Q7Z3T8 1539 aa1.09□□□□□ -2.24
VBP1-202ENST00000460509 MYH7P12883 1935 aa1.09□□□□□ -2.24
VBP1-202ENST00000460509 PTPRDP23468 1912 aa1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms