RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 F6UZH7 168 aa9.43□□□□□ -0.9
UPF3AP2-201ENST00000457924 KRTAP10-4P60372 401 aaPredicted RBP9.43□□□□□ -0.9
UPF3AP2-201ENST00000457924 KHDC3LQ587J8 217 aa9.43□□□□□ -0.9
UPF3AP2-201ENST00000457924 CHAC1Q9BUX1 264 aa9.43□□□□□ -0.9
UPF3AP2-201ENST00000457924 WDR61Q9GZS3 305 aaKnown RBP9.43□□□□□ -0.9
UPF3AP2-201ENST00000457924 TREM1Q9NP99 234 aa9.43□□□□□ -0.9
UPF3AP2-201ENST00000457924 OTORQ9NRC9 128 aa9.43□□□□□ -0.9
UPF3AP2-201ENST00000457924 NUDT15Q9NV35 164 aa9.43□□□□□ -0.9
UPF3AP2-201ENST00000457924 PGPA6NDG6 321 aa9.42□□□□□ -0.9
UPF3AP2-201ENST00000457924 GGTLC3B5MD39 225 aa9.42□□□□□ -0.9
UPF3AP2-201ENST00000457924 PLA2G10O15496 165 aa9.42□□□□□ -0.9
UPF3AP2-201ENST00000457924 MGST1P10620 155 aaKnown RBP9.42□□□□□ -0.9
UPF3AP2-201ENST00000457924 TAS2R45P59539 299 aa9.42□□□□□ -0.9
UPF3AP2-201ENST00000457924 GOLT1AQ6ZVE7 132 aa9.42□□□□□ -0.9
UPF3AP2-201ENST00000457924 Q8N976 141 aa9.42□□□□□ -0.9
UPF3AP2-201ENST00000457924 LRP1Q07954 4544 aaKnown RBP9.41□□□□□ -0.9
UPF3AP2-201ENST00000457924 ACOT6Q3I5F7 207 aaPredicted RBP9.41□□□□□ -0.9
UPF3AP2-201ENST00000457924 DPPA3Q6W0C5 159 aa9.41□□□□□ -0.9
UPF3AP2-201ENST00000457924 DAZ4Q86SG3 579 aaKnown RBP9.41□□□□□ -0.9
UPF3AP2-201ENST00000457924 CIRBP-AS1Q8TBR5 109 aa9.41□□□□□ -0.9
UPF3AP2-201ENST00000457924 RMI2Q96E14 147 aa9.41□□□□□ -0.9
UPF3AP2-201ENST00000457924 TVP23CQ96ET8 276 aa9.41□□□□□ -0.9
UPF3AP2-201ENST00000457924 DAZ3Q9NR90 486 aaKnown RBP9.41□□□□□ -0.9
UPF3AP2-201ENST00000457924 FFAR4Q5NUL3 377 aa9.4□□□□□ -0.9
UPF3AP2-201ENST00000457924 MBD2Q9UBB5 411 aa9.4□□□□□ -0.9
UPF3AP2-201ENST00000457924 TRAV8-1A0A0A6YYK1 113 aa9.39□□□□□ -0.91
UPF3AP2-201ENST00000457924 ARL6IP6Q8N6S5 226 aa9.39□□□□□ -0.91
UPF3AP2-201ENST00000457924 NDFIP1Q9BT67 221 aa9.39□□□□□ -0.91
UPF3AP2-201ENST00000457924 URGCP-MRPS24S4R325 110 aa9.39□□□□□ -0.91
UPF3AP2-201ENST00000457924 IGKV2D-24A0A075B6R9 120 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 A0A087WWC5 75 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 KRTAP4-8A0A0G2JLE6 195 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 RNF222A6NCQ9 220 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 GAGE12JA6NER3 117 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 PGPEP1LA6NFU8 196 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 TAAR5O14804 337 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 IGLV2-8P01709 118 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 SEC11BP0C7V7 166 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 GAGE1Q13065 139 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 GAGE4Q13068 117 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 GAGE5Q13069 117 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 GAGE13Q4V321 117 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 ZNF506Q5JVG8 444 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 PTH2Q96A98 100 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 C9orf85Q96MD7 179 aa9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 RBM38Q9H0Z9 239 aaKnown RBP9.38□□□□□ -0.91
UPF3AP2-201ENST00000457924 KRTAP9-7A8MTY7 169 aa9.37□□□□□ -0.91
UPF3AP2-201ENST00000457924 CYB561D1Q8N8Q1 229 aa9.37□□□□□ -0.91
UPF3AP2-201ENST00000457924 OR5AC2Q9NZP5 309 aa9.37□□□□□ -0.91
UPF3AP2-201ENST00000457924 EIF3GO75821 320 aaKnown RBP eCLIP9.36□□□□□ -0.91
UPF3AP2-201ENST00000457924 LINC00694P0DN24 101 aa9.36□□□□□ -0.91
UPF3AP2-201ENST00000457924 GNG5P63218 68 aa9.36□□□□□ -0.91
UPF3AP2-201ENST00000457924 LRRC37A5PQ49AS3 106 aa9.36□□□□□ -0.91
UPF3AP2-201ENST00000457924 PQLC2Q6ZP29 291 aa9.36□□□□□ -0.91
UPF3AP2-201ENST00000457924 SCGB1C1Q8TD33 95 aa9.36□□□□□ -0.91
UPF3AP2-201ENST00000457924 SGK494Q96LW2 274 aa9.36□□□□□ -0.91
UPF3AP2-201ENST00000457924 C11orf21Q9P2W6 132 aa9.36□□□□□ -0.91
UPF3AP2-201ENST00000457924 ZNF80P51504 273 aaPredicted RBP9.35□□□□□ -0.91
UPF3AP2-201ENST00000457924 FGF8P55075 233 aaPredicted RBP9.35□□□□□ -0.91
UPF3AP2-201ENST00000457924 RPL37AP61513 92 aaKnown RBP9.35□□□□□ -0.91
UPF3AP2-201ENST00000457924 ZFP2Q6ZN57 461 aa9.35□□□□□ -0.91
UPF3AP2-201ENST00000457924 FAT3Q8TDW7 4589 aa9.35□□□□□ -0.91
UPF3AP2-201ENST00000457924 PARLQ9H300 379 aa9.35□□□□□ -0.91
UPF3AP2-201ENST00000457924 FAM240BA0A1B0GVZ2 78 aa9.34□□□□□ -0.91
UPF3AP2-201ENST00000457924 SERTM2A0A1B0GWG4 89 aa9.34□□□□□ -0.91
UPF3AP2-201ENST00000457924 A0A1W2PPV4 95 aa9.34□□□□□ -0.91
UPF3AP2-201ENST00000457924 A8MWV9 139 aa9.34□□□□□ -0.91
UPF3AP2-201ENST00000457924 SIX6O95475 246 aa9.34□□□□□ -0.91
UPF3AP2-201ENST00000457924 GCGP01275 180 aa9.34□□□□□ -0.91
UPF3AP2-201ENST00000457924 IGLV2-11P01706 119 aa9.34□□□□□ -0.91
UPF3AP2-201ENST00000457924 RNASE3P12724 160 aaKnown RBP9.34□□□□□ -0.91
UPF3AP2-201ENST00000457924 TMEM75Q8N9X5 138 aa9.34□□□□□ -0.91
UPF3AP2-201ENST00000457924 OR2T35Q8NGX2 323 aa9.34□□□□□ -0.91
UPF3AP2-201ENST00000457924 KLK12Q9UKR0 248 aa9.34□□□□□ -0.91
UPF3AP2-201ENST00000457924 H0YIZ8 118 aa9.33□□□□□ -0.92
UPF3AP2-201ENST00000457924 K7EQM0 130 aa9.33□□□□□ -0.92
UPF3AP2-201ENST00000457924 CYCSP99999 105 aaKnown RBP9.33□□□□□ -0.92
UPF3AP2-201ENST00000457924 LGALSLQ3ZCW2 172 aaPredicted RBP9.33□□□□□ -0.92
UPF3AP2-201ENST00000457924 ZFP69Q49AA0 526 aa9.33□□□□□ -0.92
UPF3AP2-201ENST00000457924 NIT1Q86X76 327 aa9.33□□□□□ -0.92
UPF3AP2-201ENST00000457924 OR10G9Q8NGN4 311 aa9.33□□□□□ -0.92
UPF3AP2-201ENST00000457924 UBE2WQ96B02 151 aa9.33□□□□□ -0.92
UPF3AP2-201ENST00000457924 DNAJC30Q96LL9 226 aa9.33□□□□□ -0.92
UPF3AP2-201ENST00000457924 SAMD10Q9BYL1 202 aa9.33□□□□□ -0.92
UPF3AP2-201ENST00000457924 S100A4P26447 101 aaKnown RBP9.32□□□□□ -0.92
UPF3AP2-201ENST00000457924 ELOBQ15370 118 aa9.32□□□□□ -0.92
UPF3AP2-201ENST00000457924 C14orf177Q52M58 125 aa9.32□□□□□ -0.92
UPF3AP2-201ENST00000457924 SMUG1Q53HV7 270 aa9.32□□□□□ -0.92
UPF3AP2-201ENST00000457924 KCNIP4Q6PIL6 250 aa9.32□□□□□ -0.92
UPF3AP2-201ENST00000457924 PSG8Q9UQ74 426 aa9.32□□□□□ -0.92
UPF3AP2-201ENST00000457924 A0A087WX48 190 aa9.31□□□□□ -0.92
UPF3AP2-201ENST00000457924 TCRAP04437 139 aa9.31□□□□□ -0.92
UPF3AP2-201ENST00000457924 PIK3CD-AS1Q5SR53 167 aa9.31□□□□□ -0.92
UPF3AP2-201ENST00000457924 MZT2BQ6NZ67 158 aa9.31□□□□□ -0.92
UPF3AP2-201ENST00000457924 C14orf178Q8N769 122 aaPredicted RBP9.31□□□□□ -0.92
UPF3AP2-201ENST00000457924 C5orf17Q8NAS9 161 aa9.31□□□□□ -0.92
UPF3AP2-201ENST00000457924 LINC00479Q96M42 142 aa9.31□□□□□ -0.92
UPF3AP2-201ENST00000457924 SMIM3Q9BZL3 60 aa9.31□□□□□ -0.92
UPF3AP2-201ENST00000457924 Q9UF83 564 aa9.31□□□□□ -0.92
UPF3AP2-201ENST00000457924 HSPB11Q9Y547 144 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms