RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 DEFB1P60022 68 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 RPL19P84098 196 aaKnown RBP3.57□□□□□ -1.84
RIF1-207ENST00000454583 LINC01545Q5VT33 79 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 MORN3Q6PF18 240 aaPredicted RBP3.57□□□□□ -1.84
RIF1-207ENST00000454583 SHISA2Q6UWI4 295 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 GOLT1AQ6ZVE7 132 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 ASCL2Q99929 193 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 C2orf88Q9BSF0 95 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 TMEM191AQ9H0A3 160 aa3.57□□□□□ -1.84
RIF1-207ENST00000454583 SNURFLB1AK76 121 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 H3BTX0 84 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 INSL3P51460 131 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 PKIAP61925 76 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 FAM104BQ5XKR9 115 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 CFAP161Q6P656 301 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 TMEM158Q8WZ71 300 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 OR5B12Q96R08 314 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 CLEC5AQ9NY25 188 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 DPF1Q92782 380 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 TM2D3Q9BRN9 247 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 PF4V1P10720 104 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 IQCJQ1A5X6 159 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 FAM162BQ5T6X4 162 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 LINC00173Q6ZV60 143 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 BLNKQ8WV28 456 aa3.56□□□□□ -1.84
RIF1-207ENST00000454583 K7EIL1 84 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 OVOL1O14753 267 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 GATCO43716 136 aaKnown RBP3.55□□□□□ -1.84
RIF1-207ENST00000454583 APCSP02743 223 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 C3orf79P0CE67 100 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 HIST1H1AQ02539 215 aaPredicted RBP3.55□□□□□ -1.84
RIF1-207ENST00000454583 ERCC8Q13216 396 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 PLGLAQ15195 96 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 MAJINQ3KP22 176 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 FOXI2Q6ZQN5 318 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 ZNF705GA8MUZ8 300 aaPredicted RBP3.55□□□□□ -1.84
RIF1-207ENST00000454583 A8MWL6 223 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 Q56UQ5 140 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 PIK3CD-AS1Q5SR53 167 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 RNASE8Q8TDE3 154 aaKnown RBP3.55□□□□□ -1.84
RIF1-207ENST00000454583 NDUFAF3Q9BU61 184 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 DKK2Q9UBU2 259 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 SRIP30626 198 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 MRPL51Q4U2R6 128 aaKnown RBP3.55□□□□□ -1.84
RIF1-207ENST00000454583 Q8NAQ8 132 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 OVOL2Q9BRP0 275 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 HHLA3Q9XRX5 114 aa3.55□□□□□ -1.84
RIF1-207ENST00000454583 NCR2O95944 276 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 ANXA2RQ3ZCQ2 193 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 IGFL4Q6B9Z1 124 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 LYZL1Q6UWQ5 148 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 CMTM2Q8TAZ6 248 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 SGK494Q96LW2 274 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 NIT2Q9NQR4 276 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 NAGKQ9UJ70 344 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 CCDC168Q8NDH2 2452 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 G3V4G9 280 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 DDTP30046 118 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 C2orf91Q6ZV80 131 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 METTL26Q96S19 204 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 MSRB1Q9NZV6 116 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 LAMTOR2Q9Y2Q5 125 aa3.54□□□□□ -1.84
RIF1-207ENST00000454583 IGHV3OR16-8A0A075B7F1 116 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 ZNF138P52744 262 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 PRNTQ86SH4 94 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 OR8A1Q8NGG7 326 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 Q8TAT8 98 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 TMEM18Q96B42 140 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 WFDC10AQ9H1F0 79 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 ATRQ13535 2644 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 EPPK1P58107 5090 aaKnown RBP3.53□□□□□ -1.84
RIF1-207ENST00000454583 A0A1B0GUT8 65 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 F6UB75 175 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 TSHBP01222 138 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 P01737 135 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 SNRPCP09234 159 aaKnown RBP3.53□□□□□ -1.84
RIF1-207ENST00000454583 CD7P09564 240 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 IGLC3P0DOY3 106 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 PRR27Q6MZM9 219 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 SNHG12Q9BXW3 62 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 M0R381 172 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 SAMD13Q5VXD3 122 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 MRPL54Q6P161 138 aaKnown RBP3.53□□□□□ -1.84
RIF1-207ENST00000454583 RASL10AQ92737 203 aa3.53□□□□□ -1.84
RIF1-207ENST00000454583 IGHV3-16A0A0C4DH30 117 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 ZNF207O43670 478 aaKnown RBP3.52□□□□□ -1.85
RIF1-207ENST00000454583 IGLL1P15814 213 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 TCL1AP56279 114 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 RPS20P60866 119 aaKnown RBP3.52□□□□□ -1.85
RIF1-207ENST00000454583 KIAA1644Q3SXP7 199 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 PGLYRP4Q96LB8 373 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 LINC00477Q96M19 166 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 PEMTQ9UBM1 199 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 MTORP42345 2549 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 SONP18583 2426 aaKnown RBP3.52□□□□□ -1.85
RIF1-207ENST00000454583 HSPG2P98160 4391 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 IGHV3-35A0A0C4DH35 117 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 TRBV6-5A0A0K0K1A5 114 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 CRYGDP07320 174 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 C9orf66Q5T8R8 295 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms