RNA–Protein interactions for RNA: ENST00000453216.1

TRAM2-AS1-201, Transcript of TRAM2 antisense RNA 1 (head to head), humanhuman

TSL 3 BASIC

Gene TRAM2-AS1, Length 664 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-AS1-201ENST00000453216 GIPP09681 153 aaPredicted RBP17.6■□□□□ 0.41
TRAM2-AS1-201ENST00000453216 RNASE3P12724 160 aaKnown RBP17.6■□□□□ 0.41
TRAM2-AS1-201ENST00000453216 IBA57-AS1B1ANH7 110 aa17.59■□□□□ 0.41
TRAM2-AS1-201ENST00000453216 MGST1P10620 155 aaKnown RBP17.59■□□□□ 0.41
TRAM2-AS1-201ENST00000453216 RPL7L1Q6DKI1 246 aaKnown RBP17.59■□□□□ 0.41
TRAM2-AS1-201ENST00000453216 BORCS7-ASMTA0A0B4J1R7 106 aa17.58■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 GCSHP23434 173 aa17.58■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 LELP1Q5T871 98 aa17.58■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 LINC00479Q96M42 142 aa17.58■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 TRAV34A0A0B4J273 112 aa17.57■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 IFNA7P01567 189 aa17.57■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 ATP6V0E2Q8NHE4 81 aa17.57■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 GTSF1LQ9H1H1 148 aa17.57■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 RNF222A6NCQ9 220 aa17.56■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 S100A4P26447 101 aaKnown RBP17.56■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 ZNF726P1Q15940 193 aa17.56■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 Q9HAA7 133 aa17.56■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 FXYD6-FXYD2A0A087WZ82 144 aa17.55■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 IGKV3D-20A0A0C4DH25 116 aa17.55■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 CTXND1A0A1B0GTU2 59 aa17.55■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 LRCOL1A6NCL2 159 aa17.55■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 IGHV3-30P01768 117 aa17.55■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 IGHV3-33P01772 117 aa17.55■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 IGHV3-30-3P0DP02 117 aa17.55■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 IGHV3-30-5P0DP03 117 aa17.55■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 ARL2-SNX15V9GYD0 113 aa17.55■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 FAT1Q14517 4588 aa17.54■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 FABP5P3A8MUU1 101 aa17.54■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 A8MWV9 139 aa17.54■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 UBE2G2P60604 165 aa17.54■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 PARLQ9H300 379 aa17.54■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 IGLV5-52A0A0A0MRZ9 124 aa17.53■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 ASIPP42127 132 aa17.53■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 LGALSLQ3ZCW2 172 aaPredicted RBP17.53■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 ZFP2Q6ZN57 461 aa17.53■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 Q6ZSN1 163 aa17.53■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 NTN5Q8WTR8 489 aaPredicted RBP17.53■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 FRZBQ92765 325 aa17.53■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 PEX7O00628 323 aa17.52■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 PIK3CD-AS1Q5SR53 167 aa17.52■□□□□ 0.4
TRAM2-AS1-201ENST00000453216 Q5VSD8 79 aa17.51■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 Q86TA4 180 aa17.51■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 NKX6-2Q9C056 277 aaPredicted RBP17.51■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 INAFM2P0DMQ5 153 aa17.5■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 FGF8P55075 233 aaPredicted RBP17.5■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 AKR1C8PQ5T2L2 129 aa17.5■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 OR2T35Q8NGX2 323 aa17.5■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 HIST1H2BAQ96A08 127 aa17.5■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 IL36BQ9NZH7 164 aa17.5■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 GAGE12JA6NER3 117 aa17.49■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 FAM74A7A6NL05 159 aa17.49■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 B4DEV8 164 aa17.49■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 GAGE1Q13065 139 aa17.49■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 GAGE4Q13068 117 aa17.49■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 GAGE5Q13069 117 aa17.49■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 LAGE3Q14657 143 aa17.49■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 GAGE13Q4V321 117 aa17.49■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 Q8N814 137 aa17.49■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 VPS13BQ7Z7G8 4022 aa17.48■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 LINC00694P0DN24 101 aa17.47■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 TM2D2Q9BX73 214 aa17.47■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 JPT2Q9H910 190 aa17.47■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 H3BVH4 76 aa17.46■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 SMR3BP02814 79 aaPredicted RBP17.46■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 SYT8Q8NBV8 401 aa17.46■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 ZC2HC1AQ96GY0 325 aa17.46■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 ZFP30Q9Y2G7 519 aa17.46■□□□□ 0.39
TRAM2-AS1-201ENST00000453216 KRBOX1C9JBD0 128 aa17.45■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 M0R036 132 aa17.45■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 CRIP1P50238 77 aa17.45■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 DMRTA1Q5VZB9 504 aa17.45■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 UFSP1Q6NVU6 142 aa17.45■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 Q8N3U1 123 aa17.45■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 TMEM70Q9BUB7 260 aa17.45■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 SAMD10Q9BYL1 202 aa17.45■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 MAP1LC3B2A6NCE7 125 aa17.44■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 SH2D1AO60880 128 aa17.44■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 ARMS2P0C7Q2 107 aa17.44■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 DNLZQ5SXM8 178 aa17.44■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 C14orf178Q8N769 122 aaPredicted RBP17.44■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 MAP1LC3BQ9GZQ8 125 aa17.44■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 Q9UF83 564 aa17.44■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 A0A087WWC5 75 aa17.43■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 RHODO00212 210 aa17.43■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 UBE2G1P62253 170 aa17.43■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 HAMPP81172 84 aa17.43■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 COX8CQ7Z4L0 72 aa17.43■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 OR11H4Q8NGC9 324 aa17.43■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 FMC1Q96HJ9 113 aa17.43■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 SRRM2Q9UQ35 2752 aaKnown RBP17.42■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 GRIFINA4D1Z8 144 aa17.42■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 G3V3Q6 166 aa17.42■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 FAM162BQ5T6X4 162 aa17.42■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 HERC1Q15751 4861 aa17.42■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 TRAV8-3A0A0A6YYJ7 113 aa17.41■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 FAM229AH3BQW9 127 aa17.41■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 ARPC5O15511 151 aa17.41■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 CYTL1Q9NRR1 136 aa17.41■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 TOR2AQ5JU69 321 aa17.4■□□□□ 0.38
TRAM2-AS1-201ENST00000453216 FAM74A4Q5TZK3 123 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms