RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 TMEM14DPA8MWL7 114 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 GABARAPH6UMI1 98 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 H7C1C5 153 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 MFSD11O43934 449 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 SAA1P0DJI8 122 aaPredicted RBP-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 CCL3L1P16619 93 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 PTPRGP23470 1445 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 GLRXP35754 106 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 POLR2JP52435 117 aaKnown RBP-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 ERVS71-1P61550 626 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 NPC2P61916 151 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 BLCAPP62952 87 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 BASP1P80723 227 aaKnown RBP-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 RPL19P84098 196 aaKnown RBP-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 INSL4Q14641 139 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 C10orf71Q711Q0 1435 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 C4orf33Q8N1A6 199 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 OTOSQ8NHW6 89 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 NEK7Q8TDX7 302 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 SMIM7Q9BQ49 75 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 C19orf12Q9NSK7 152 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 ARMC1Q9NVT9 282 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 SLC22A13Q9Y226 551 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 CNOT1A5YKK6 2376 aaKnown RBP-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 SPTBN1Q01082 2364 aaKnown RBP-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 AKAP11Q9UKA4 1901 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 PTPRMP28827 1452 aa-0.68□□□□□ -2.52
SNHG3-203ENST00000447507 USF3Q68DE3 2245 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 TRAPPC8Q9Y2L5 1435 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 TGP01266 2768 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 DNAH3Q8TD57 4116 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 IGHV1-24A0A0C4DH33 117 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 A0A0D9SFI3 127 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 LOC107986453A0A1B0GWG9 222 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 TRDV1A0A1B0GX56 115 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 TCRBV3S1A0A5B6 114 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 IFITM5A6NNB3 132 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 PPP5D1E7EU14 171 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 H3BQV1 296 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 M0QZK8 103 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 BCE1O60756 84 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 APOA2P02652 100 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 IFNA6P05013 189 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 SPRR2AP35326 72 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 PPP1R2P41236 205 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 ARF6P62330 175 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 CCL7P80098 99 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 CCSMST1Q4G0I0 132 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 OR2T2Q6IF00 324 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 SPAG11AQ6PDA7 123 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 HRCT1Q6UXD1 115 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 C20orf197Q8N268 126 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 MORN4Q8NDC4 146 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 IFI27L1Q96BM0 104 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 PPP1R14BQ96C90 147 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 MCEEQ96PE7 176 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 PBDC1Q9BVG4 233 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 PYCARDQ9ULZ3 195 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 SSR3Q9UNL2 185 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 CAMSAP1Q5T5Y3 1602 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 ARAP1Q96P48 1450 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 ADGBQ8N7X0 1667 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 ZMYM4Q5VZL5 1548 aa-0.69□□□□□ -2.52
SNHG3-203ENST00000447507 MYH1P12882 1939 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 CASZ1Q86V15 1759 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 PKHD1L1Q86WI1 4243 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 MYO18BQ8IUG5 2567 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 FXYD6-FXYD2A0A087WZ82 144 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 TRBV27A0A0K0K1C4 114 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 RBAKDNA6NC62 111 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 SMIM23A6NLE4 172 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 AIPO00170 330 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 ATG12O94817 140 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 SPINK8P0C7L1 97 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 SLC25A6P12236 298 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 SPRR2EP22531 72 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 CRYGSP22914 178 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 SDC4P31431 198 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 SDC2P34741 201 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 CDKN2CP42773 168 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 CEBPGP53567 150 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 SCGB2B2Q4G0G5 96 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 AKR1C8PQ5T2L2 129 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 LINC00305Q7Z4B0 112 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 NUP35Q8NFH5 326 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 OR4S1Q8NGB4 309 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 COX7B2Q8TF08 81 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 PHB2Q99623 299 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 SH3BGRL3Q9H299 93 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 BATF3Q9NR55 127 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 LYRM2Q9NU23 88 aaPredicted RBP-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 MED11Q9P086 117 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 NDUFAF1Q9Y375 327 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 PLB1Q6P1J6 1458 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 PLXNA2O75051 1894 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 DSPP15924 2871 aaKnown RBP-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 BIRC6Q9NR09 4857 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 MYH2Q9UKX2 1941 aa-0.7□□□□□ -2.52
SNHG3-203ENST00000447507 PLXNB2O15031 1838 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 NUP210Q8TEM1 1887 aaPredicted RBP-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms