RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CABLES2Q9BTV7 478 aa3.13□□□□□ -1.91
SDCBP-205ENST00000447267 GABARAPL3Q9BY60 117 aa3.13□□□□□ -1.91
SDCBP-205ENST00000447267 TTTY10Q9BZA0 68 aa3.13□□□□□ -1.91
SDCBP-205ENST00000447267 MAGIXQ9H6Y5 334 aa3.13□□□□□ -1.91
SDCBP-205ENST00000447267 NPVFQ9HCQ7 196 aa3.13□□□□□ -1.91
SDCBP-205ENST00000447267 TRBV24-1A0A075B6N3 115 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 TINCRA0A1B0GVN0 87 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 ZNF727A8MUV8 499 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 K7EP34 96 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 M0R2Z0 102 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 CHEK1O14757 476 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 SPINT2O43291 252 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 DIRAS1O95057 198 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 APOHP02749 345 aaPredicted RBP3.12□□□□□ -1.91
SDCBP-205ENST00000447267 RPL7P18124 248 aaKnown RBP3.12□□□□□ -1.91
SDCBP-205ENST00000447267 SRIP30626 198 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 GPR183P32249 361 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 LPAR6P43657 344 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 P2RY1P47900 373 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 UBE2MP61081 183 aaKnown RBP3.12□□□□□ -1.91
SDCBP-205ENST00000447267 RPL24P83731 157 aaKnown RBP3.12□□□□□ -1.91
SDCBP-205ENST00000447267 SPHARQ15513 63 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 KLK9Q2XQG4 91 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 LY6G6FQ5SQ64 297 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 C10orf55Q5SWW7 151 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 INO80EQ8NBZ0 244 aaPredicted RBP3.12□□□□□ -1.91
SDCBP-205ENST00000447267 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.12□□□□□ -1.91
SDCBP-205ENST00000447267 OR5A1Q8NGJ0 315 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 OR51A2Q8NGJ7 313 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 OR2G3Q8NGZ4 309 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 TMEM170AQ8WVE7 144 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 BAALCQ8WXS3 180 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 PP6455Q8WZ26 134 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 EEF1AKMT3Q96AZ1 226 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 SMIM19Q96E16 107 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 CYYR1Q96J86 154 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 SLC25A21Q9BQT8 299 aaPredicted RBP3.12□□□□□ -1.91
SDCBP-205ENST00000447267 RHPN1-AS1Q9BWJ2 59 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 SLC35B3Q9H1N7 401 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 KCNIP1Q9NZI2 227 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 KLK9Q9UKQ9 250 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 CYSLTR1Q9Y271 337 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 R4GMQ9 66 aa3.12□□□□□ -1.91
SDCBP-205ENST00000447267 TRAV8-6A0A0B4J262 113 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 SRRM4A7MD48 611 aaKnown RBP3.11□□□□□ -1.91
SDCBP-205ENST00000447267 TEX22C9J3V5 150 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 GABARAPH6UMI1 98 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 J3KT08 172 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 TAAR5O14804 337 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 NDUFB6O95139 128 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 SFT2D2O95562 160 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 EIF4EP06730 217 aaKnown RBP3.11□□□□□ -1.91
SDCBP-205ENST00000447267 SPINK8P0C7L1 97 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 NTF3P20783 257 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 SULT1A2P50226 295 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 TAS2R31P59538 309 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 ZNF415Q09FC8 603 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 TMEM97Q5BJF2 176 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 MOB1BQ7L9L4 216 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 FAM19A5Q7Z5A7 132 aaPredicted RBP3.11□□□□□ -1.91
SDCBP-205ENST00000447267 CEACAM19Q7Z692 300 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 PDPNQ86YL7 162 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 OR10AC1Q8NH08 325 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 OR5AK2Q8NH90 309 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 ZNF502Q8TBZ5 544 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 ADTRPQ96IZ2 230 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 FEVQ99581 238 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 WDR61Q9GZS3 305 aaKnown RBP3.11□□□□□ -1.91
SDCBP-205ENST00000447267 MS4A6AQ9H2W1 248 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 MAP1LC3AQ9H492 121 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 CMC2Q9NRP2 79 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 COMMD9Q9P000 198 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 KLK11Q9UBX7 282 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 ZNF257Q9Y2Q1 563 aa3.11□□□□□ -1.91
SDCBP-205ENST00000447267 TRBV7-1A0A0A6YYK4 115 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 BORCS7-ASMTA0A0B4J1R7 106 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 IGHV7-4-1A0A0J9YVY3 117 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 TRDV1A0A1B0GX56 115 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 C7orf71A4D174 169 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 A6NDN8 102 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 CCDC179H3BU77 68 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 K7EMT4 169 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 M0R1X1 148 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 OR7C1O76099 320 aaPredicted RBP3.1□□□□□ -1.91
SDCBP-205ENST00000447267 HRASP01112 189 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 KRASP01116 189 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 ATP5G1P05496 136 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 CT45A10P0DMU9 189 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 ATP5G3P48201 142 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 CAMPP49913 170 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 YPEL3P61236 119 aaPredicted RBP3.1□□□□□ -1.91
SDCBP-205ENST00000447267 CATR1Q13166 79 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 OR10J3Q5JRS4 329 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 DPPA3Q6W0C5 159 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 Q6ZRG5 221 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 GAPTQ8N292 157 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 OR51A4Q8NGJ6 313 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 SMIM4Q8WVI0 70 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 FCAMRQ8WWV6 532 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms