RNA–Protein interactions for RNA: ENST00000443977.1

PRKD3-204, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 518 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-204ENST00000443977 OR11H12B2RN74 326 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 PRAC2D3DTV9 90 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 F8VRH5 84 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 F8W1H4 67 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 K7EMT4 169 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 IGHV1-69P01742 117 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 IGF1P05019 195 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 HLA-DMBP28068 263 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 SUMO2P61956 95 aaKnown RBP3.41□□□□□ -1.86
PRKD3-204ENST00000443977 LMO4P61968 165 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 ZC2HC1BQ5TFG8 222 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 UFSP1Q6NVU6 142 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 Q6ZVH6 145 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 CEND1Q8N111 149 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 RNF182Q8N6D2 247 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 OR11H1Q8NG94 326 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 OR11H2Q8NH07 326 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 GLMPQ8WWB7 406 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 HIST1H4GQ99525 98 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 CHAC1Q9BUX1 264 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 SMIM2Q9BVW6 85 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 KRTAP1-5Q9BYS1 174 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 MSRB1Q9NZV6 116 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 HHLA3Q9XRX5 114 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 CHTOPQ9Y3Y2 248 aaKnown RBP3.41□□□□□ -1.86
PRKD3-204ENST00000443977 SPEGQ15772 3267 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 DOPEY1Q5JWR5 2465 aa3.41□□□□□ -1.86
PRKD3-204ENST00000443977 DNHD1Q96M86 4753 aa3.4□□□□□ -1.86
PRKD3-204ENST00000443977 IGLV2-18A0A075B6J9 118 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 TRBV25-1A0A075B6N4 114 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 TRAV8-2A0A0B4J237 113 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 TRAV40A0A0B4J280 105 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 IGHV3-66A0A0C4DH42 116 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 IGHV7-4-1A0A0J9YVY3 117 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 TMEM89A2RUT3 159 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 G3V318 75 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 G3V4G9 280 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 H3BVH4 76 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 VCYO14598 125 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 PPIFP30405 207 aaKnown RBP3.4□□□□□ -1.87
PRKD3-204ENST00000443977 FXYD7P58549 80 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 DSCR9P59020 149 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 RPL32P62910 135 aaKnown RBP3.4□□□□□ -1.87
PRKD3-204ENST00000443977 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 CLEC2AQ6UVW9 174 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 FAM159AQ6UWV7 190 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 GTSCR1Q86UQ5 136 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 PCP2Q8IVA1 136 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 NRACQ8N912 160 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 ITLN2Q8WWU7 325 aaPredicted RBP3.4□□□□□ -1.87
PRKD3-204ENST00000443977 RAB37Q96AX2 223 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 TOMM6Q96B49 74 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 TMEM141Q96I45 108 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 KIR2DL4Q99706 377 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 BPESC1Q9GZL8 116 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 VCX2Q9H322 139 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 MRPL35Q9NZE8 188 aaKnown RBP3.4□□□□□ -1.87
PRKD3-204ENST00000443977 ZNF580Q9UK33 172 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 CYSLTR1Q9Y271 337 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 GVINP1Q7Z2Y8 2422 aa3.4□□□□□ -1.87
PRKD3-204ENST00000443977 NCOR2Q9Y618 2525 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 SPTBN1Q01082 2364 aaKnown RBP3.39□□□□□ -1.87
PRKD3-204ENST00000443977 SPTBN4Q9H254 2564 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 IGHV4OR15-8A0A075B7B6 117 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 IGHV3OR16-8A0A075B7F1 116 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 A0A087WW49 117 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 IGHV3-49A0A0A0MS15 119 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 MYMXA0A1B0GTQ4 84 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 DUSP14O95147 198 aaKnown RBP3.39□□□□□ -1.87
PRKD3-204ENST00000443977 IGHG2P01859 326 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 MGPP08493 103 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 RNASE4P34096 147 aaKnown RBP3.39□□□□□ -1.87
PRKD3-204ENST00000443977 SNRPD3P62318 126 aaKnown RBP3.39□□□□□ -1.87
PRKD3-204ENST00000443977 RPL24P83731 157 aaKnown RBP3.39□□□□□ -1.87
PRKD3-204ENST00000443977 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 C2orf66Q6UXQ4 117 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 FOXI2Q6ZQN5 318 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 Q71RC1 249 aaPredicted RBP3.39□□□□□ -1.87
PRKD3-204ENST00000443977 NEGR1Q7Z3B1 354 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 APRG1Q8IVJ8 170 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 ZNF479Q96JC4 524 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 ODF3Q96PU9 254 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 CSTL1Q9H114 145 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 DAZ1Q9NQZ3 744 aaKnown RBP3.39□□□□□ -1.87
PRKD3-204ENST00000443977 NHP2Q9NX24 153 aaKnown RBP3.39□□□□□ -1.87
PRKD3-204ENST00000443977 ITPR3Q14573 2671 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 SPTA1P02549 2419 aa3.39□□□□□ -1.87
PRKD3-204ENST00000443977 PRRC2CQ9Y520 2896 aaKnown RBP3.38□□□□□ -1.87
PRKD3-204ENST00000443977 VPS13AQ96RL7 3174 aa3.38□□□□□ -1.87
PRKD3-204ENST00000443977 IGHV3OR16-13A0A075B7E8 117 aa3.38□□□□□ -1.87
PRKD3-204ENST00000443977 IGHV3-74A0A0B4J1X5 117 aa3.38□□□□□ -1.87
PRKD3-204ENST00000443977 A6NDX4 124 aa3.38□□□□□ -1.87
PRKD3-204ENST00000443977 DNAJC9-AS1A6NH13 148 aa3.38□□□□□ -1.87
PRKD3-204ENST00000443977 IGLL5B9A064 214 aa3.38□□□□□ -1.87
PRKD3-204ENST00000443977 E9PLD3 99 aa3.38□□□□□ -1.87
PRKD3-204ENST00000443977 SCGB1A1P11684 91 aa3.38□□□□□ -1.87
PRKD3-204ENST00000443977 GATA1P15976 413 aaPredicted RBP3.38□□□□□ -1.87
PRKD3-204ENST00000443977 KRTAP10-6P60371 365 aaPredicted RBP3.38□□□□□ -1.87
PRKD3-204ENST00000443977 SRSF9Q13242 221 aaKnown RBP eCLIP3.38□□□□□ -1.87
PRKD3-204ENST00000443977 C12orf74Q32Q52 190 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms