RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 PRSS47A8MTI9 375 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 FABP5P3A8MUU1 101 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 TCRAP04437 139 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 TYMSP04818 313 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 CRYGDP07320 174 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 ARL14EPLP0DKL9 152 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 MGST1P10620 155 aaKnown RBP5.3□□□□□ -1.56
CD44-211ENST00000442151 GATA1P15976 413 aaPredicted RBP5.3□□□□□ -1.56
CD44-211ENST00000442151 S100A4P26447 101 aaKnown RBP5.3□□□□□ -1.56
CD44-211ENST00000442151 GCHFRP30047 84 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 FGF8P55075 233 aaPredicted RBP5.3□□□□□ -1.56
CD44-211ENST00000442151 RAB2AP61019 212 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 FLI1Q01543 452 aaPredicted RBP5.3□□□□□ -1.56
CD44-211ENST00000442151 TOR2AQ5JU69 321 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 CYB561D1Q8N8Q1 229 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 TMEM75Q8N9X5 138 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 SUN5Q8TC36 379 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 NTN5Q8WTR8 489 aaPredicted RBP5.3□□□□□ -1.56
CD44-211ENST00000442151 WFDC1Q9HC57 220 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 SCRT2Q9NQ03 307 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 FAT2Q9NYQ8 4349 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 IGHV3-38A0A0C4DH36 116 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 A8MWV9 139 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 RS1O15537 224 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 IFNA7P01567 189 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 GIPP09681 153 aaPredicted RBP5.3□□□□□ -1.56
CD44-211ENST00000442151 SFTA3P0C7M3 94 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 ATP6V0CP27449 155 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 OR10J3Q5JRS4 329 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 HSD17B11Q8NBQ5 300 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 SYT8Q8NBV8 401 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 STOML3Q8TAV4 291 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 HIST1H2BAQ96A08 127 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 KRTAP1-5Q9BYS1 174 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 ALG5Q9Y673 324 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 DNAH11Q96DT5 4516 aa5.3□□□□□ -1.56
CD44-211ENST00000442151 DNAH2Q9P225 4427 aa5.29□□□□□ -1.56
CD44-211ENST00000442151 A0A087WTM6 91 aa5.29□□□□□ -1.56
CD44-211ENST00000442151 A0A087WWC5 75 aa5.29□□□□□ -1.56
CD44-211ENST00000442151 EPM2AB3EWF7 344 aa5.29□□□□□ -1.56
CD44-211ENST00000442151 GCGP01275 180 aa5.29□□□□□ -1.56
CD44-211ENST00000442151 KRTAP10-2P60368 255 aa5.29□□□□□ -1.56
CD44-211ENST00000442151 LINC01556Q5JQF7 62 aa5.29□□□□□ -1.56
CD44-211ENST00000442151 AKR1C8PQ5T2L2 129 aa5.29□□□□□ -1.56
CD44-211ENST00000442151 LELP1Q5T871 98 aa5.29□□□□□ -1.56
CD44-211ENST00000442151 ZFP2Q6ZN57 461 aa5.29□□□□□ -1.56
CD44-211ENST00000442151 PRNTQ86SH4 94 aa5.29□□□□□ -1.56
CD44-211ENST00000442151 TCEAL7Q9BRU2 100 aa5.29□□□□□ -1.56
CD44-211ENST00000442151 COX11Q9Y6N1 276 aa5.29□□□□□ -1.56
CD44-211ENST00000442151 DYNC1H1Q14204 4646 aaKnown RBP5.29□□□□□ -1.56
CD44-211ENST00000442151 CTXND1A0A1B0GTU2 59 aa5.28□□□□□ -1.56
CD44-211ENST00000442151 RHODO00212 210 aa5.28□□□□□ -1.56
CD44-211ENST00000442151 HMGB3O15347 200 aaKnown RBP5.28□□□□□ -1.56
CD44-211ENST00000442151 GCSHP23434 173 aa5.28□□□□□ -1.56
CD44-211ENST00000442151 ASIPP42127 132 aa5.28□□□□□ -1.56
CD44-211ENST00000442151 KCNIP4Q6PIL6 250 aa5.28□□□□□ -1.56
CD44-211ENST00000442151 Q6ZRN7 208 aaPredicted RBP5.28□□□□□ -1.56
CD44-211ENST00000442151 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.28□□□□□ -1.56
CD44-211ENST00000442151 ATP6V0E2Q8NHE4 81 aa5.28□□□□□ -1.56
CD44-211ENST00000442151 FRZBQ92765 325 aa5.28□□□□□ -1.56
CD44-211ENST00000442151 RMI2Q96E14 147 aa5.28□□□□□ -1.56
CD44-211ENST00000442151 ZFP30Q9Y2G7 519 aa5.28□□□□□ -1.56
CD44-211ENST00000442151 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
CD44-211ENST00000442151 IBA57-AS1B1ANH7 110 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 S100A9P06702 114 aaKnown RBP5.27□□□□□ -1.57
CD44-211ENST00000442151 GNG5P63218 68 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 ELOBQ15370 118 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 LGALSLQ3ZCW2 172 aaPredicted RBP5.27□□□□□ -1.57
CD44-211ENST00000442151 CFAP126Q5VTH2 177 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 Q6ZQT7 251 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 GTSF1LQ9H1H1 148 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 TRAV8-3A0A0A6YYJ7 113 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 TRAV8-1A0A0A6YYK1 113 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 CFAP161Q6P656 301 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 WFDC10BQ8IUB3 73 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 SLC25A29Q8N8R3 303 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 TVP23CQ96ET8 276 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 C9orf85Q96MD7 179 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 URGCP-MRPS24S4R325 110 aa5.27□□□□□ -1.57
CD44-211ENST00000442151 GGTLC3B5MD39 225 aa5.26□□□□□ -1.57
CD44-211ENST00000442151 FHITP49789 147 aa5.26□□□□□ -1.57
CD44-211ENST00000442151 UBE2G1P62253 170 aa5.26□□□□□ -1.57
CD44-211ENST00000442151 EIF5AP63241 154 aaKnown RBP5.26□□□□□ -1.57
CD44-211ENST00000442151 LAGE3Q14657 143 aa5.26□□□□□ -1.57
CD44-211ENST00000442151 PKD1P98161 4303 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 FXYD6-FXYD2A0A087WZ82 144 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 IGLV5-52A0A0A0MRZ9 124 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 PEX7O00628 323 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 PKIAP61925 76 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 DNLZQ5SXM8 178 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 OR11H4Q8NGC9 324 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 FMC1Q96HJ9 113 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 SGK494Q96LW2 274 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 IL36BQ9NZH7 164 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 ARL2-SNX15V9GYD0 113 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 TRBV6-1A0A0K0K1D8 114 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 PGPEP1LA6NFU8 196 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 B4DEV8 164 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 C1QBP02746 253 aa5.25□□□□□ -1.57
CD44-211ENST00000442151 TPT1P13693 172 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms