RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 U3KQA8 63 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 ARHGAP21Q5T5U3 1957 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 EML6Q6ZMW3 1958 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 IGKV1-27A0A075B6S5 117 aa4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 REG3AQ06141 175 aa4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 CEND1Q8N111 149 aa4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 OR8A1Q8NGG7 326 aa4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 NHP2Q9NX24 153 aaKnown RBP4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 MED12Q93074 2177 aa4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 IGKV1D-43A0A0B4J1Z2 117 aa4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 TRBV27A0A0K0K1C4 114 aa4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 TCRBV4S1A1TA0A5B7 111 aa4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 K7ERJ3 54 aa4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 ZNF80P51504 273 aaPredicted RBP4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 DSCR4P56555 118 aaPredicted RBP4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 LGALS9CQ6DKI2 356 aa4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 Q6P435 159 aa4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 ZNF329Q86UD4 541 aa4.34□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 TNRC6BQ9UPQ9 1833 aaKnown RBP4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 SDK2Q58EX2 2172 aa4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 SYNJ2BPP57105 145 aa4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 PCP2Q8IVA1 136 aa4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 SBSPONQ8IVN8 264 aa4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 C3orf56Q8N813 242 aa4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 PTPRBP23467 1997 aa4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 VPS13AQ96RL7 3174 aa4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 NPC2P61916 151 aa4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 KIAA0087Q14695 138 aa4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 CYYR1Q96J86 154 aa4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 CHAC1Q9BUX1 264 aa4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 MOB4Q9Y3A3 225 aa4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 F11RQ9Y624 299 aaKnown RBP4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 ZDBF2Q9HCK1 2354 aa4.33□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 FRYLO94915 3013 aa4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 RTTNQ86VV8 2226 aa4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 IGHV1-45A0A0A0MS14 117 aa4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 A8MWL6 223 aa4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 IAPPP10997 89 aa4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 COX7CP15954 63 aa4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 S100A4P26447 101 aaKnown RBP4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 RPL30P62888 115 aaKnown RBP4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 UBE2BP63146 152 aa4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 GDF5OSQ5U4N7 250 aa4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 C6orf201Q7Z4U5 140 aa4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 NKAPP1Q8N9T2 125 aa4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 NPCDR1Q9BY65 106 aa4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 CFAP54Q96N23 3096 aa4.32□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 TRGV5A0A0B4J1U4 118 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 RBAKDNA6NC62 111 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 NTN3O00634 580 aaPredicted RBP4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 IGHV1-2P23083 117 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 FXYD3Q14802 87 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 MDP1Q86V88 176 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 FAM57AQ8TBR7 257 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 IMMP1LQ96LU5 166 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 ZNF702PQ9H963 129 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 MYO7BQ6PIF6 2116 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 DNAJC9-AS1A6NH13 148 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 COX6A1P12074 109 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 CCL4P13236 92 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 ORMDL2Q53FV1 153 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 SPANXN5Q5MJ07 72 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 FAM53AQ6NSI3 398 aaPredicted RBP4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 PHF5AQ7RTV0 110 aaKnown RBP4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 Q8N1X5 172 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 EPDR1Q9UM22 224 aa4.31□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 IGHV1OR15-1A0A075B7D0 117 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 ARL14EPLP0DKL9 152 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 CCL3P10147 92 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 DSCR8Q96T75 97 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 KLK5Q9Y337 293 aaPredicted RBP4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 GCHFRP30047 84 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 TFF3Q07654 80 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 KISS1Q15726 138 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 C17orf58Q2M2W7 97 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 C10orf128Q5T292 105 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 Q6ZQT7 251 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 TMEM61Q8N0U2 210 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 C15orf53Q8NAA6 179 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 C10orf105Q8TEF2 133 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 SLC25A2Q9BXI2 301 aa4.3□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 KNTC1P50748 2209 aa4.29□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 NCOR1O75376 2440 aa4.29□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 TRBV7-7A0A0K0K1E9 115 aa4.29□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 IGKV1-5P01602 117 aa4.29□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 IL4P05112 153 aa4.29□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 ZNF818PQ6ZRF7 136 aa4.29□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 GPHB5Q86YW7 130 aa4.29□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 CHCHD5Q9BSY4 110 aa4.29□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 OCR1Q9BZK8 76 aa4.29□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 PROK2Q9HC23 129 aa4.29□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 COL6A3P12111 3177 aa4.29□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 AHCTF1Q8WYP5 2266 aa4.29□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 IGHV4-30-2A0A087WSY4 118 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 IGHV3-15A0A0B4J1V0 119 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 IGLV2-8P01709 118 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 ZNF883P0CG24 379 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 LINC01547P58512 204 aaPredicted RBP4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 LINC00205P59089 165 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 MRPS36P82909 103 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms