RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 A8MWV9 139 aa7.24□□□□□ -1.25
MCF2L-216ENST00000439475 RS1O15537 224 aa7.24□□□□□ -1.25
MCF2L-216ENST00000439475 SH2D1AO60880 128 aa7.24□□□□□ -1.25
MCF2L-216ENST00000439475 LTAP01374 205 aa7.24□□□□□ -1.25
MCF2L-216ENST00000439475 RNASE3P12724 160 aaKnown RBP7.24□□□□□ -1.25
MCF2L-216ENST00000439475 GYPEP15421 78 aa7.24□□□□□ -1.25
MCF2L-216ENST00000439475 ZNF674Q2M3X9 581 aa7.24□□□□□ -1.25
MCF2L-216ENST00000439475 ZC2HC1AQ96GY0 325 aa7.24□□□□□ -1.25
MCF2L-216ENST00000439475 IL36BQ9NZH7 164 aa7.24□□□□□ -1.25
MCF2L-216ENST00000439475 TRAV9-2A0A087WT02 112 aa7.23□□□□□ -1.25
MCF2L-216ENST00000439475 SCO2A0A1W2PP80 73 aa7.23□□□□□ -1.25
MCF2L-216ENST00000439475 KRBOX1C9JBD0 128 aa7.23□□□□□ -1.25
MCF2L-216ENST00000439475 K7EQD1 137 aa7.23□□□□□ -1.25
MCF2L-216ENST00000439475 M0R036 132 aa7.23□□□□□ -1.25
MCF2L-216ENST00000439475 SIVA1O15304 175 aa7.23□□□□□ -1.25
MCF2L-216ENST00000439475 BTF3P20290 206 aaKnown RBP7.23□□□□□ -1.25
MCF2L-216ENST00000439475 TAGLN2P37802 199 aaKnown RBP7.23□□□□□ -1.25
MCF2L-216ENST00000439475 CRIP1P50238 77 aa7.23□□□□□ -1.25
MCF2L-216ENST00000439475 ZNF506Q5JVG8 444 aa7.23□□□□□ -1.25
MCF2L-216ENST00000439475 DNLZQ5SXM8 178 aa7.23□□□□□ -1.25
MCF2L-216ENST00000439475 LYPD5Q6UWN5 251 aa7.23□□□□□ -1.25
MCF2L-216ENST00000439475 C6orf223Q8N319 242 aa7.23□□□□□ -1.25
MCF2L-216ENST00000439475 BOLA1Q9Y3E2 137 aa7.23□□□□□ -1.25
MCF2L-216ENST00000439475 PHLDA3Q9Y5J5 127 aa7.23□□□□□ -1.25
MCF2L-216ENST00000439475 DNAH6Q9C0G6 4158 aa7.22□□□□□ -1.25
MCF2L-216ENST00000439475 TRBV6-4A0A1B0GX49 114 aa7.22□□□□□ -1.25
MCF2L-216ENST00000439475 RTL8CO15255 209 aa7.22□□□□□ -1.25
MCF2L-216ENST00000439475 ARMS2P0C7Q2 107 aa7.22□□□□□ -1.25
MCF2L-216ENST00000439475 MGST1P10620 155 aaKnown RBP7.22□□□□□ -1.25
MCF2L-216ENST00000439475 GATA1P15976 413 aaPredicted RBP7.22□□□□□ -1.25
MCF2L-216ENST00000439475 CCL20P78556 96 aa7.22□□□□□ -1.25
MCF2L-216ENST00000439475 RHOHQ15669 191 aa7.22□□□□□ -1.25
MCF2L-216ENST00000439475 LINC01559Q495D7 138 aa7.22□□□□□ -1.25
MCF2L-216ENST00000439475 CFAP126Q5VTH2 177 aa7.22□□□□□ -1.25
MCF2L-216ENST00000439475 NHLRC2Q8NBF2 726 aa7.22□□□□□ -1.25
MCF2L-216ENST00000439475 GRIFINA4D1Z8 144 aa7.21□□□□□ -1.26
MCF2L-216ENST00000439475 H3BVH4 76 aa7.21□□□□□ -1.26
MCF2L-216ENST00000439475 PDE6DO43924 150 aa7.21□□□□□ -1.26
MCF2L-216ENST00000439475 BLOC1S1P78537 153 aa7.21□□□□□ -1.26
MCF2L-216ENST00000439475 ZFP2Q6ZN57 461 aa7.21□□□□□ -1.26
MCF2L-216ENST00000439475 DAZAP1Q96EP5 407 aaKnown RBP7.21□□□□□ -1.26
MCF2L-216ENST00000439475 TMSB15BA0A087X1C1 80 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 IGHV3-73A0A0B4J1V6 119 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 K7EP13 123 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 RHODO00212 210 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 NXPH4O95158 308 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 CXCL1P09341 107 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 RPL35P42766 123 aaKnown RBP7.2□□□□□ -1.26
MCF2L-216ENST00000439475 MEF2BQ02080 365 aaPredicted RBP7.2□□□□□ -1.26
MCF2L-216ENST00000439475 PRR27Q6MZM9 219 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 ZFP82Q8N141 532 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 C9orf62Q8N4C0 152 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 SLC25A29Q8N8R3 303 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 C11orf52Q96A22 123 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 MLST8Q9BVC4 326 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 PARLQ9H300 379 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 BIN3Q9NQY0 253 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 MED9Q9NWA0 146 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 VAX2Q9UIW0 290 aa7.2□□□□□ -1.26
MCF2L-216ENST00000439475 DNAH10Q8IVF4 4471 aa7.19□□□□□ -1.26
MCF2L-216ENST00000439475 TRAV8-6A0A0B4J262 113 aa7.19□□□□□ -1.26
MCF2L-216ENST00000439475 MED14OSP0DP75 135 aa7.19□□□□□ -1.26
MCF2L-216ENST00000439475 EVI2AP22794 236 aa7.19□□□□□ -1.26
MCF2L-216ENST00000439475 DMRTA1Q5VZB9 504 aa7.19□□□□□ -1.26
MCF2L-216ENST00000439475 SMIM12Q96EX1 92 aa7.19□□□□□ -1.26
MCF2L-216ENST00000439475 LY96Q9Y6Y9 160 aa7.19□□□□□ -1.26
MCF2L-216ENST00000439475 M0R381 172 aa7.18□□□□□ -1.26
MCF2L-216ENST00000439475 BCL2P10415 239 aa7.18□□□□□ -1.26
MCF2L-216ENST00000439475 GNG4P50150 75 aa7.18□□□□□ -1.26
MCF2L-216ENST00000439475 TIRAPP58753 221 aa7.18□□□□□ -1.26
MCF2L-216ENST00000439475 RPS20P60866 119 aaKnown RBP7.18□□□□□ -1.26
MCF2L-216ENST00000439475 ATP6V0E2Q8NHE4 81 aa7.18□□□□□ -1.26
MCF2L-216ENST00000439475 LOC100131303A0A0U1RQF7 123 aa7.17□□□□□ -1.26
MCF2L-216ENST00000439475 XKRY2A2RUG3 117 aa7.17□□□□□ -1.26
MCF2L-216ENST00000439475 CENPWQ5EE01 88 aa7.17□□□□□ -1.26
MCF2L-216ENST00000439475 SPANXN1Q5VSR9 72 aa7.17□□□□□ -1.26
MCF2L-216ENST00000439475 ALKAL2Q6UX46 152 aa7.17□□□□□ -1.26
MCF2L-216ENST00000439475 NFE4Q86UQ8 179 aa7.17□□□□□ -1.26
MCF2L-216ENST00000439475 C10orf126Q8N4M7 172 aa7.17□□□□□ -1.26
MCF2L-216ENST00000439475 SFRP2Q96HF1 295 aa7.17□□□□□ -1.26
MCF2L-216ENST00000439475 SCRT2Q9NQ03 307 aa7.17□□□□□ -1.26
MCF2L-216ENST00000439475 A0A1B0GVY2 172 aa7.16□□□□□ -1.26
MCF2L-216ENST00000439475 OR10J3Q5JRS4 329 aa7.16□□□□□ -1.26
MCF2L-216ENST00000439475 FAM74A4Q5TZK3 123 aa7.16□□□□□ -1.26
MCF2L-216ENST00000439475 DERL1Q9BUN8 251 aa7.16□□□□□ -1.26
MCF2L-216ENST00000439475 GTSF1LQ9H1H1 148 aa7.16□□□□□ -1.26
MCF2L-216ENST00000439475 JPT2Q9H910 190 aa7.16□□□□□ -1.26
MCF2L-216ENST00000439475 EPPK1P58107 5090 aaKnown RBP7.15□□□□□ -1.26
MCF2L-216ENST00000439475 IGHV3-38A0A0C4DH36 116 aa7.15□□□□□ -1.26
MCF2L-216ENST00000439475 RAB19A4D1S5 217 aa7.15□□□□□ -1.26
MCF2L-216ENST00000439475 GAGE12JA6NER3 117 aa7.15□□□□□ -1.26
MCF2L-216ENST00000439475 OR5AL1P0C617 328 aa7.15□□□□□ -1.26
MCF2L-216ENST00000439475 SMIM17P0DL12 118 aa7.15□□□□□ -1.26
MCF2L-216ENST00000439475 RPL19P84098 196 aaKnown RBP7.15□□□□□ -1.26
MCF2L-216ENST00000439475 TNP2Q05952 138 aa7.15□□□□□ -1.26
MCF2L-216ENST00000439475 GAGE1Q13065 139 aa7.15□□□□□ -1.26
MCF2L-216ENST00000439475 GAGE4Q13068 117 aa7.15□□□□□ -1.26
MCF2L-216ENST00000439475 GAGE5Q13069 117 aa7.15□□□□□ -1.26
MCF2L-216ENST00000439475 GAGE13Q4V321 117 aa7.15□□□□□ -1.26
MCF2L-216ENST00000439475 LELP1Q5T871 98 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms