RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 PATE2Q6UY27 113 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 SOSTDC1Q6X4U4 206 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 OR5AS1Q8N127 324 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 Q8N8P6 123 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 OR2T35Q8NGX2 323 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 CLDND2Q8NHS1 167 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 TSKUQ8WUA8 353 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 FGF13Q92913 245 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 SMDT1Q9H4I9 107 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 LINC00574Q9H8X3 128 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 OSTCQ9NRP0 149 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 TMEM242Q9NWH2 141 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 PTPRBP23467 1997 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 HMGXB3Q12766 1538 aa1.96□□□□□ -2.09
LSM1P1-201ENST00000438629 SIPA1L3O60292 1781 aaPredicted RBP1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 IGHV3OR16-8A0A075B7F1 116 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 A6NN06 94 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 ZNF736B4DX44 427 aaPredicted RBP1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 UMAD1C9J7I0 102 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 C3orf84H3BNL1 204 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 H3BQ85 93 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 LECT2O14960 151 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 LEPROTO15243 131 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 IGHV1-69P01742 117 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 IL5P05113 134 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 CGB3P0DN86 165 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 CGB7P0DN87 165 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 CCL4P13236 92 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 KRTAP10-1P60331 282 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 LSM3P62310 102 aaKnown RBP1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 BLCAPP62952 87 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 RPL18Q07020 188 aaKnown RBP1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 CIRBPQ14011 172 aaKnown RBP1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 WFDC2Q14508 124 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 NMSQ5H8A3 153 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 C12orf73Q69YU5 71 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 NOXRED1Q6NXP6 359 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 SDIM1Q6ZPB5 146 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 MIR17HGQ75NE6 70 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 SPATA12Q7Z6I5 190 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 C5orf38Q86SI9 138 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 C18orf32Q8TCD1 76 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 KLF14Q8TD94 323 aaPredicted RBP1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 CLEC2BQ92478 149 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 UPK3BQ9BT76 320 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 C11orf1Q9H5F2 150 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 TAS2R4Q9NYW5 299 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 EDC4Q6P2E9 1401 aaKnown RBP1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 TSPOAP1O95153 1857 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 EHBP1L1Q8N3D4 1523 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 KIAA0586Q9BVV6 1533 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 MYOM1P52179 1685 aa1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 CLTCQ00610 1675 aaKnown RBP1.96□□□□□ -2.1
LSM1P1-201ENST00000438629 COL18A1P39060 1754 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 ATP7BP35670 1465 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 POLEQ07864 2286 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 IGHV3-73A0A0B4J1V6 119 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 MDFIC2A0A1B0GVS7 189 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 NAP1L6A6NFF2 107 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 C17orf112F2Z3M2 114 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 K7EM74 188 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 LYRM1O43325 122 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 ZNF737O75373 536 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 LY6HO94772 140 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 IGKV4-1P06312 121 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 ZNF345Q14585 488 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 KISS1Q15726 138 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 C16orf47Q6ZP98 133 aaPredicted RBP1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 FAM216BQ8N7L0 139 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 SIGLECL1Q8N7X8 197 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 CNEP1R1Q8N9A8 125 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 CMTM2Q8TAZ6 248 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 AQP3Q92482 292 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 SPTSSAQ969W0 71 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 SCGB3A1Q96QR1 104 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 MGST2Q99735 147 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 TTTY13Q9BZ97 58 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 LY96Q9Y6Y9 160 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 U3KQK5 164 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 V9GYH0 126 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 PREX1Q8TCU6 1659 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 EFCAB6Q5THR3 1501 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 KCPQ6ZWJ8 1503 aa1.95□□□□□ -2.1
LSM1P1-201ENST00000438629 TANC1Q9C0D5 1861 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 NUP188Q5SRE5 1749 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 CRYBG1Q9Y4K1 1723 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 UNC13BO14795 1591 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 USP54Q70EL1 1684 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 PTPRDP23468 1912 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 IGLV3-9A0A075B6K5 115 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 IGKV1OR2-108A0A075B7D4 117 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 KANTRA0A1W2PQU2 76 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 J3QLW9 94 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 IGHV3-7P01780 117 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 MSMBP08118 114 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 SAA1P0DJI8 122 aaPredicted RBP1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 CCL8P80075 99 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 MIAQ16674 131 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 OR8B3Q8NGG8 313 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms