RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 SCRT2Q9NQ03 307 aa9.63□□□□□ -0.87
DDX56-204ENST00000431640 MRPS16Q9Y3D3 137 aaKnown RBP9.63□□□□□ -0.87
DDX56-204ENST00000431640 A0A096LNJ9 63 aa9.62□□□□□ -0.87
DDX56-204ENST00000431640 EREGO14944 169 aa9.62□□□□□ -0.87
DDX56-204ENST00000431640 FAM159AQ6UWV7 190 aa9.62□□□□□ -0.87
DDX56-204ENST00000431640 A0A1B0GV90 55 aa9.61□□□□□ -0.87
DDX56-204ENST00000431640 EDN2P20800 178 aa9.61□□□□□ -0.87
DDX56-204ENST00000431640 TSPOP30536 169 aa9.61□□□□□ -0.87
DDX56-204ENST00000431640 DEFB1P60022 68 aa9.61□□□□□ -0.87
DDX56-204ENST00000431640 LGALS9BQ3B8N2 356 aa9.61□□□□□ -0.87
DDX56-204ENST00000431640 MAJINQ3KP22 176 aa9.61□□□□□ -0.87
DDX56-204ENST00000431640 LGALS9CQ6DKI2 356 aa9.61□□□□□ -0.87
DDX56-204ENST00000431640 Q6ZQT7 251 aa9.61□□□□□ -0.87
DDX56-204ENST00000431640 DPH3P1Q9H4G8 78 aa9.61□□□□□ -0.87
DDX56-204ENST00000431640 NIPBLQ6KC79 2804 aaeCLIP9.61□□□□□ -0.87
DDX56-204ENST00000431640 A0A0J9YX75 114 aa9.6□□□□□ -0.87
DDX56-204ENST00000431640 LINC01619G3V211 115 aa9.6□□□□□ -0.87
DDX56-204ENST00000431640 PPP1R17O96001 155 aa9.6□□□□□ -0.87
DDX56-204ENST00000431640 PSMG4Q5JS54 123 aa9.6□□□□□ -0.87
DDX56-204ENST00000431640 WFDC12Q8WWY7 111 aa9.6□□□□□ -0.87
DDX56-204ENST00000431640 DPF1Q92782 380 aa9.6□□□□□ -0.87
DDX56-204ENST00000431640 IFI27L1Q96BM0 104 aa9.6□□□□□ -0.87
DDX56-204ENST00000431640 PEMTQ9UBM1 199 aa9.6□□□□□ -0.87
DDX56-204ENST00000431640 TRAV2A0A0B4J234 112 aa9.59□□□□□ -0.87
DDX56-204ENST00000431640 H0Y8G0 127 aa9.59□□□□□ -0.87
DDX56-204ENST00000431640 RNASE1P07998 156 aaKnown RBP9.59□□□□□ -0.87
DDX56-204ENST00000431640 ZNF688P0C7X2 276 aa9.59□□□□□ -0.87
DDX56-204ENST00000431640 TFPI2P48307 235 aa9.59□□□□□ -0.87
DDX56-204ENST00000431640 NUTF2P61970 127 aaKnown RBP9.59□□□□□ -0.87
DDX56-204ENST00000431640 NRACQ8N912 160 aa9.59□□□□□ -0.87
DDX56-204ENST00000431640 C4orf3Q8WVX3 66 aa9.59□□□□□ -0.87
DDX56-204ENST00000431640 ZMAT5Q9UDW3 170 aaKnown RBP9.59□□□□□ -0.87
DDX56-204ENST00000431640 C7orf71A4D174 169 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 K7EMI3 77 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 M0R381 172 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 GNRH2O43555 120 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 TCTEX1D4Q5JR98 221 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 FOXI2Q6ZQN5 318 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 Q6ZSV7 163 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 ZNF418Q8TF45 676 aaPredicted RBP9.58□□□□□ -0.88
DDX56-204ENST00000431640 PMCHL2Q9BQD1 86 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 C20orf78Q9BR46 151 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 GOLT1BQ9Y3E0 138 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 IGLV2-18A0A075B6J9 118 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 RNASE3P12724 160 aaKnown RBP9.58□□□□□ -0.88
DDX56-204ENST00000431640 LAGE3Q14657 143 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 SLC25A34Q6PIV7 304 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 OR1N2Q8NGR9 330 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 AP1S3Q96PC3 154 aa9.58□□□□□ -0.88
DDX56-204ENST00000431640 hDV102S1A0JD36 115 aa9.57□□□□□ -0.88
DDX56-204ENST00000431640 ATP5LO75964 103 aa9.57□□□□□ -0.88
DDX56-204ENST00000431640 NXPH4O95158 308 aa9.57□□□□□ -0.88
DDX56-204ENST00000431640 GAS8-AS1O95177 125 aa9.57□□□□□ -0.88
DDX56-204ENST00000431640 GATA1P15976 413 aaPredicted RBP9.57□□□□□ -0.88
DDX56-204ENST00000431640 CDKN1BP46527 198 aa9.57□□□□□ -0.88
DDX56-204ENST00000431640 SCGB2A2Q13296 93 aa9.57□□□□□ -0.88
DDX56-204ENST00000431640 COL5A1-AS1Q5SY13 56 aa9.57□□□□□ -0.88
DDX56-204ENST00000431640 POM121L12Q8N7R1 296 aa9.57□□□□□ -0.88
DDX56-204ENST00000431640 SELENOKQ9Y6D0 94 aa9.57□□□□□ -0.88
DDX56-204ENST00000431640 TRAV12-3A0A0B4J271 114 aa9.56□□□□□ -0.88
DDX56-204ENST00000431640 SMIM17P0DL12 118 aa9.56□□□□□ -0.88
DDX56-204ENST00000431640 KIR3DS1Q14943 382 aa9.56□□□□□ -0.88
DDX56-204ENST00000431640 C14orf178Q8N769 122 aaPredicted RBP9.56□□□□□ -0.88
DDX56-204ENST00000431640 OR11H1Q8NG94 326 aa9.56□□□□□ -0.88
DDX56-204ENST00000431640 CD7P09564 240 aa9.55□□□□□ -0.88
DDX56-204ENST00000431640 SLURP1P55000 103 aa9.55□□□□□ -0.88
DDX56-204ENST00000431640 HIST2H2BDQ6DRA6 164 aa9.55□□□□□ -0.88
DDX56-204ENST00000431640 OR9G4Q8NGQ1 327 aa9.55□□□□□ -0.88
DDX56-204ENST00000431640 TMEM158Q8WZ71 300 aa9.55□□□□□ -0.88
DDX56-204ENST00000431640 TRAV26-2A0A0B4J265 109 aa9.54□□□□□ -0.88
DDX56-204ENST00000431640 FXYD7P58549 80 aa9.54□□□□□ -0.88
DDX56-204ENST00000431640 ORMDL2Q53FV1 153 aa9.54□□□□□ -0.88
DDX56-204ENST00000431640 SYT8Q8NBV8 401 aa9.54□□□□□ -0.88
DDX56-204ENST00000431640 MCRIP2Q9BUT9 160 aaKnown RBP9.54□□□□□ -0.88
DDX56-204ENST00000431640 SMIM2Q9BVW6 85 aa9.54□□□□□ -0.88
DDX56-204ENST00000431640 G0S2P27469 103 aa9.54□□□□□ -0.88
DDX56-204ENST00000431640 SUMO2P61956 95 aaKnown RBP9.54□□□□□ -0.88
DDX56-204ENST00000431640 BATFQ16520 125 aa9.54□□□□□ -0.88
DDX56-204ENST00000431640 ADAMTSL5Q6ZMM2 481 aa9.54□□□□□ -0.88
DDX56-204ENST00000431640 PRIMA1Q86XR5 153 aa9.54□□□□□ -0.88
DDX56-204ENST00000431640 IGHV1OR15-1A0A075B7D0 117 aa9.53□□□□□ -0.88
DDX56-204ENST00000431640 PRSS1P07477 247 aa9.53□□□□□ -0.88
DDX56-204ENST00000431640 COX8AP10176 69 aa9.53□□□□□ -0.88
DDX56-204ENST00000431640 RASL10AQ92737 203 aa9.53□□□□□ -0.88
DDX56-204ENST00000431640 C2CD3Q4AC94 2353 aa9.53□□□□□ -0.88
DDX56-204ENST00000431640 IGHV3-16A0A0C4DH30 117 aa9.52□□□□□ -0.89
DDX56-204ENST00000431640 LINC01549A6NIU2 74 aa9.52□□□□□ -0.89
DDX56-204ENST00000431640 TCAPO15273 167 aa9.52□□□□□ -0.89
DDX56-204ENST00000431640 MGPP08493 103 aa9.52□□□□□ -0.89
DDX56-204ENST00000431640 RPL32P62910 135 aaKnown RBP9.52□□□□□ -0.89
DDX56-204ENST00000431640 KHDC1LQ5JSQ8 128 aa9.52□□□□□ -0.89
DDX56-204ENST00000431640 C18orf65Q6ZTR6 163 aa9.52□□□□□ -0.89
DDX56-204ENST00000431640 LINC00469Q8N7U9 141 aa9.52□□□□□ -0.89
DDX56-204ENST00000431640 KLHL30-AS1Q8NEE0 82 aa9.52□□□□□ -0.89
DDX56-204ENST00000431640 C9orf85Q96MD7 179 aa9.52□□□□□ -0.89
DDX56-204ENST00000431640 C18orf15Q96N68 181 aa9.52□□□□□ -0.89
DDX56-204ENST00000431640 KIF25-AS1Q9Y6Z4 181 aa9.52□□□□□ -0.89
DDX56-204ENST00000431640 FBN1P35555 2871 aaKnown RBP9.52□□□□□ -0.89
DDX56-204ENST00000431640 TRGV11A0A075B6L2 103 aa9.51□□□□□ -0.89
DDX56-204ENST00000431640 A8MTW9 85 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms