RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 HMGB3O15347 200 aaKnown RBP12.35□□□□□ -0.43
AC004540.1-202ENST00000430548 GCGP01275 180 aa12.35□□□□□ -0.43
AC004540.1-202ENST00000430548 CDC34P49427 236 aaPredicted RBP12.35□□□□□ -0.43
AC004540.1-202ENST00000430548 ATP6V0E2Q8NHE4 81 aa12.35□□□□□ -0.43
AC004540.1-202ENST00000430548 SSNA1O43805 119 aa12.34□□□□□ -0.43
AC004540.1-202ENST00000430548 Q8N3U1 123 aa12.34□□□□□ -0.43
AC004540.1-202ENST00000430548 TM2D2Q9BX73 214 aa12.34□□□□□ -0.43
AC004540.1-202ENST00000430548 PSG8Q9UQ74 426 aa12.34□□□□□ -0.43
AC004540.1-202ENST00000430548 GGTLC3B5MD39 225 aa12.33□□□□□ -0.44
AC004540.1-202ENST00000430548 PIK3CD-AS1Q5SR53 167 aa12.33□□□□□ -0.44
AC004540.1-202ENST00000430548 PARLQ9H300 379 aa12.33□□□□□ -0.44
AC004540.1-202ENST00000430548 K7EQM0 130 aa12.32□□□□□ -0.44
AC004540.1-202ENST00000430548 FLI1Q01543 452 aaPredicted RBP12.32□□□□□ -0.44
AC004540.1-202ENST00000430548 ZFP69Q49AA0 526 aa12.32□□□□□ -0.44
AC004540.1-202ENST00000430548 SMUG1Q53HV7 270 aa12.32□□□□□ -0.44
AC004540.1-202ENST00000430548 ZFP2Q6ZN57 461 aa12.32□□□□□ -0.44
AC004540.1-202ENST00000430548 PSMG3Q9BT73 122 aaPredicted RBP12.32□□□□□ -0.44
AC004540.1-202ENST00000430548 GCHFRP30047 84 aa12.31□□□□□ -0.44
AC004540.1-202ENST00000430548 CYB561D1Q8N8Q1 229 aa12.31□□□□□ -0.44
AC004540.1-202ENST00000430548 RAB24Q969Q5 203 aa12.31□□□□□ -0.44
AC004540.1-202ENST00000430548 TRAV8-3A0A0A6YYJ7 113 aa12.3□□□□□ -0.44
AC004540.1-202ENST00000430548 UFSP1Q6NVU6 142 aa12.3□□□□□ -0.44
AC004540.1-202ENST00000430548 LINC00479Q96M42 142 aa12.3□□□□□ -0.44
AC004540.1-202ENST00000430548 SH3BGRL3Q9H299 93 aa12.3□□□□□ -0.44
AC004540.1-202ENST00000430548 IGKV3D-20A0A0C4DH25 116 aa12.29□□□□□ -0.44
AC004540.1-202ENST00000430548 A8MWV9 139 aa12.29□□□□□ -0.44
AC004540.1-202ENST00000430548 PLA2G1BP04054 148 aaKnown RBP12.29□□□□□ -0.44
AC004540.1-202ENST00000430548 LINC00528Q8N1L1 170 aa12.29□□□□□ -0.44
AC004540.1-202ENST00000430548 HSD17B11Q8NBQ5 300 aa12.29□□□□□ -0.44
AC004540.1-202ENST00000430548 EPDR1Q9UM22 224 aa12.29□□□□□ -0.44
AC004540.1-202ENST00000430548 KRTAP29-1A8MX34 341 aaPredicted RBP12.28□□□□□ -0.44
AC004540.1-202ENST00000430548 TOR2AQ5JU69 321 aa12.28□□□□□ -0.44
AC004540.1-202ENST00000430548 SAPCD1Q5SSQ6 148 aa12.28□□□□□ -0.44
AC004540.1-202ENST00000430548 PRNTQ86SH4 94 aa12.28□□□□□ -0.44
AC004540.1-202ENST00000430548 TMEM167BQ9NRX6 74 aa12.28□□□□□ -0.44
AC004540.1-202ENST00000430548 GAGE12JA6NER3 117 aa12.27□□□□□ -0.45
AC004540.1-202ENST00000430548 J3QL48 77 aa12.27□□□□□ -0.45
AC004540.1-202ENST00000430548 ATP6V0CP27449 155 aa12.27□□□□□ -0.45
AC004540.1-202ENST00000430548 SUMO1P63165 101 aaKnown RBP12.27□□□□□ -0.45
AC004540.1-202ENST00000430548 GAGE1Q13065 139 aa12.27□□□□□ -0.45
AC004540.1-202ENST00000430548 GAGE4Q13068 117 aa12.27□□□□□ -0.45
AC004540.1-202ENST00000430548 GAGE5Q13069 117 aa12.27□□□□□ -0.45
AC004540.1-202ENST00000430548 GAGE13Q4V321 117 aa12.27□□□□□ -0.45
AC004540.1-202ENST00000430548 DAZ4Q86SG3 579 aaKnown RBP12.27□□□□□ -0.45
AC004540.1-202ENST00000430548 AQP10Q96PS8 301 aa12.27□□□□□ -0.45
AC004540.1-202ENST00000430548 DAZ3Q9NR90 486 aaKnown RBP12.27□□□□□ -0.45
AC004540.1-202ENST00000430548 Q9UF83 564 aa12.27□□□□□ -0.45
AC004540.1-202ENST00000430548 A0A087WWC5 75 aa12.26□□□□□ -0.45
AC004540.1-202ENST00000430548 CXorf1O96002 111 aa12.26□□□□□ -0.45
AC004540.1-202ENST00000430548 MBP02144 154 aa12.26□□□□□ -0.45
AC004540.1-202ENST00000430548 DEFA1P59665 94 aa12.26□□□□□ -0.45
AC004540.1-202ENST00000430548 DEFA3P59666 94 aa12.26□□□□□ -0.45
AC004540.1-202ENST00000430548 SERF2P84101 59 aa12.26□□□□□ -0.45
AC004540.1-202ENST00000430548 IL36BQ9NZH7 164 aa12.26□□□□□ -0.45
AC004540.1-202ENST00000430548 LRP1Q07954 4544 aaKnown RBP12.25□□□□□ -0.45
AC004540.1-202ENST00000430548 A0A1W2PRE2 83 aa12.25□□□□□ -0.45
AC004540.1-202ENST00000430548 LECT2O14960 151 aa12.25□□□□□ -0.45
AC004540.1-202ENST00000430548 COX11Q9Y6N1 276 aa12.25□□□□□ -0.45
AC004540.1-202ENST00000430548 ARL2-SNX15V9GYD0 113 aa12.25□□□□□ -0.45
AC004540.1-202ENST00000430548 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.24□□□□□ -0.45
AC004540.1-202ENST00000430548 ASIPP42127 132 aa12.24□□□□□ -0.45
AC004540.1-202ENST00000430548 DNLZQ5SXM8 178 aa12.24□□□□□ -0.45
AC004540.1-202ENST00000430548 SCXQ7RTU7 201 aa12.24□□□□□ -0.45
AC004540.1-202ENST00000430548 Q86TA4 180 aa12.24□□□□□ -0.45
AC004540.1-202ENST00000430548 C14orf178Q8N769 122 aaPredicted RBP12.24□□□□□ -0.45
AC004540.1-202ENST00000430548 SAMD10Q9BYL1 202 aa12.24□□□□□ -0.45
AC004540.1-202ENST00000430548 JPT2Q9H910 190 aa12.24□□□□□ -0.45
AC004540.1-202ENST00000430548 TNFSF18Q9UNG2 199 aa12.24□□□□□ -0.45
AC004540.1-202ENST00000430548 RHODO00212 210 aa12.23□□□□□ -0.45
AC004540.1-202ENST00000430548 S100A4P26447 101 aaKnown RBP12.23□□□□□ -0.45
AC004540.1-202ENST00000430548 FGF8P55075 233 aaPredicted RBP12.23□□□□□ -0.45
AC004540.1-202ENST00000430548 KRTAP10-4P60372 401 aaPredicted RBP12.23□□□□□ -0.45
AC004540.1-202ENST00000430548 LGALSLQ3ZCW2 172 aaPredicted RBP12.23□□□□□ -0.45
AC004540.1-202ENST00000430548 NIT1Q86X76 327 aa12.23□□□□□ -0.45
AC004540.1-202ENST00000430548 DEFB104AQ8WTQ1 72 aa12.23□□□□□ -0.45
AC004540.1-202ENST00000430548 FABP5P3A8MUU1 101 aa12.22□□□□□ -0.45
AC004540.1-202ENST00000430548 OR2T35Q8NGX2 323 aa12.22□□□□□ -0.45
AC004540.1-202ENST00000430548 BAALCQ8WXS3 180 aa12.22□□□□□ -0.45
AC004540.1-202ENST00000430548 ACTR3CQ9C0K3 210 aaPredicted RBP12.22□□□□□ -0.45
AC004540.1-202ENST00000430548 FAT3Q8TDW7 4589 aa12.22□□□□□ -0.45
AC004540.1-202ENST00000430548 HMCN2Q8NDA2 5059 aa12.22□□□□□ -0.45
AC004540.1-202ENST00000430548 TRAV34A0A0B4J273 112 aa12.21□□□□□ -0.45
AC004540.1-202ENST00000430548 A6NHS1 94 aa12.21□□□□□ -0.45
AC004540.1-202ENST00000430548 H3BVH4 76 aa12.21□□□□□ -0.45
AC004540.1-202ENST00000430548 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
AC004540.1-202ENST00000430548 ATRAIDQ6UW56 229 aa12.21□□□□□ -0.45
AC004540.1-202ENST00000430548 COX8CQ7Z4L0 72 aa12.21□□□□□ -0.45
AC004540.1-202ENST00000430548 RMI2Q96E14 147 aa12.21□□□□□ -0.45
AC004540.1-202ENST00000430548 CHCHD7Q9BUK0 85 aa12.21□□□□□ -0.45
AC004540.1-202ENST00000430548 ALG5Q9Y673 324 aa12.21□□□□□ -0.45
AC004540.1-202ENST00000430548 B4DEV8 164 aa12.2□□□□□ -0.46
AC004540.1-202ENST00000430548 ZNF726P1Q15940 193 aa12.2□□□□□ -0.46
AC004540.1-202ENST00000430548 LINC01620Q4KN68 170 aa12.2□□□□□ -0.46
AC004540.1-202ENST00000430548 DNAJC30Q96LL9 226 aa12.2□□□□□ -0.46
AC004540.1-202ENST00000430548 PKHD1L1Q86WI1 4243 aa12.19□□□□□ -0.46
AC004540.1-202ENST00000430548 RNF222A6NCQ9 220 aa12.19□□□□□ -0.46
AC004540.1-202ENST00000430548 KRBOX1C9JBD0 128 aa12.19□□□□□ -0.46
AC004540.1-202ENST00000430548 PEX7O00628 323 aa12.19□□□□□ -0.46
AC004540.1-202ENST00000430548 SEC11BP0C7V7 166 aa12.19□□□□□ -0.46
AC004540.1-202ENST00000430548 Q8N976 141 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms