RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 CDK12Q9NYV4 1490 aaPredicted RBP-1.01□□□□□ -2.57
LINC02541-201ENST00000427157 PIK3C2AO00443 1686 aa-1.01□□□□□ -2.57
LINC02541-201ENST00000427157 A0A0G2JMM0 328 aa-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 TMEM30CPA0ZSE6 113 aa-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 MCRIP1C9JLW8 97 aa-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 K7EP34 96 aa-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 SIPA1L3O60292 1781 aaPredicted RBP-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 IGKCP01834 107 aa-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 MT1GP13640 62 aa-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 RPL35P42766 123 aaKnown RBP-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 CEBPGP53567 150 aa-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 CD109Q6YHK3 1445 aa-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 FGD6Q6ZV73 1430 aa-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 TMEM229BQ8NBD8 167 aa-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 RTL9Q8NET4 1388 aa-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 KIAA1107Q9UPP5 1409 aa-1.02□□□□□ -2.57
LINC02541-201ENST00000427157 HELZP42694 1942 aaKnown RBP-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 PLXNA1Q9UIW2 1896 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 KIDINS220Q9ULH0 1771 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 USP54Q70EL1 1684 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 CAMSAP2Q08AD1 1489 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 BLMP54132 1417 aaPredicted RBP-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 ARL5CA6NH57 179 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 TMEM114B3SHH9 223 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 TPST1O60507 370 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 NDUFC2O95298 119 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 TRACP01848 142 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 OGNP20774 298 aaKnown RBP-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 CAPZBP47756 277 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 HSPE1P61604 102 aaKnown RBP-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 IQCJQ1A5X6 159 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 KRTAP19-5Q3LI72 72 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 FKBP1CQ5VVH2 108 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 LYPD5Q6UWN5 251 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 CLEC2BQ92478 149 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 BPESC1Q9GZL8 116 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 LINC00472Q9H8W2 130 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 TAF9BQ9HBM6 251 aa-1.03□□□□□ -2.57
LINC02541-201ENST00000427157 CSMD2Q7Z408 3487 aa-1.03□□□□□ -2.58
LINC02541-201ENST00000427157 COL4A6Q14031 1691 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 CDK13Q14004 1512 aaKnown RBP-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 ZCCHC6Q5VYS8 1495 aaKnown RBP-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 UHRF1BP1Q6BDS2 1440 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 C10orf71Q711Q0 1435 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 C5orf58C9J3I9 102 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 C9JAW5 83 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 H3BNG1 76 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 SPINK4O60575 86 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 MT1EP04732 61 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 IL7P13232 177 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 NDUFA6P56556 154 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 MRPS36P82909 103 aaKnown RBP-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 C1orf140Q5VVS0 124 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 PHF5AQ7RTV0 110 aaKnown RBP-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 MT1LQ93083 61 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 DMAC1Q96GE9 116 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 PAIP2Q9BPZ3 127 aaKnown RBP-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 C9orf16Q9BUW7 83 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 OR2H1Q9GZK4 316 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 AGPAT4-IT1Q9H0P7 198 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 SIPA1L2Q9P2F8 1722 aaPredicted RBP-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 ADGRB1O14514 1584 aa-1.04□□□□□ -2.58
LINC02541-201ENST00000427157 TROQ12816 1431 aaPredicted RBP-1.05□□□□□ -2.58
LINC02541-201ENST00000427157 CASZ1Q86V15 1759 aa-1.05□□□□□ -2.58
LINC02541-201ENST00000427157 KNDC1Q76NI1 1749 aa-1.05□□□□□ -2.58
LINC02541-201ENST00000427157 A0A0D9SFI3 127 aa-1.05□□□□□ -2.58
LINC02541-201ENST00000427157 RIIAD1A6NNX1 92 aa-1.05□□□□□ -2.58
LINC02541-201ENST00000427157 G3V2T6 193 aa-1.05□□□□□ -2.58
LINC02541-201ENST00000427157 CDC42EP2O14613 210 aa-1.05□□□□□ -2.58
LINC02541-201ENST00000427157 BCL2P10415 239 aa-1.05□□□□□ -2.58
LINC02541-201ENST00000427157 SPA17Q15506 151 aa-1.05□□□□□ -2.58
LINC02541-201ENST00000427157 SCGB2B2Q4G0G5 96 aa-1.05□□□□□ -2.58
LINC02541-201ENST00000427157 OR8J3Q8NGG0 315 aa-1.05□□□□□ -2.58
LINC02541-201ENST00000427157 CFAP53Q96M91 514 aa-1.05□□□□□ -2.58
LINC02541-201ENST00000427157 NINQ8N4C6 2090 aa-1.05□□□□□ -2.58
LINC02541-201ENST00000427157 CASKIN1Q8WXD9 1431 aa-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 ADCY9O60503 1353 aa-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 GVQW2A0A096LPI5 108 aaPredicted RBP-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 TRAV22A0A0B4J277 110 aa-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 LOC107986453A0A1B0GWG9 222 aa-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 AIPO00170 330 aa-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 SERPINA1P01009 418 aa-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 SPRR1BP22528 89 aa-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 GNG5P63218 68 aa-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 OR4B1Q8NGF8 309 aa-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 NEK7Q8TDX7 302 aa-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 PCF11O94913 1555 aaKnown RBP-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 ADAMTS12P58397 1594 aa-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 DLEC1Q9Y238 1755 aa-1.06□□□□□ -2.58
LINC02541-201ENST00000427157 PTPN23Q9H3S7 1636 aa-1.07□□□□□ -2.58
LINC02541-201ENST00000427157 ZNF815PA8K554 130 aa-1.07□□□□□ -2.58
LINC02541-201ENST00000427157 CCKP06307 115 aa-1.07□□□□□ -2.58
LINC02541-201ENST00000427157 CST2P09228 141 aa-1.07□□□□□ -2.58
LINC02541-201ENST00000427157 SPINK8P0C7L1 97 aa-1.07□□□□□ -2.58
LINC02541-201ENST00000427157 DNAJB13P59910 316 aa-1.07□□□□□ -2.58
LINC02541-201ENST00000427157 AKIRIN2Q53H80 203 aa-1.07□□□□□ -2.58
LINC02541-201ENST00000427157 SSBP3-AS1Q7Z2R9 100 aa-1.07□□□□□ -2.58
LINC02541-201ENST00000427157 DIRC1Q969H9 104 aa-1.07□□□□□ -2.58
LINC02541-201ENST00000427157 PRAP1Q96NZ9 151 aa-1.07□□□□□ -2.58
LINC02541-201ENST00000427157 MCEEQ96PE7 176 aa-1.07□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms