RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 DSCAMO60469 2012 aa10.7□□□□□ -0.7
RPL28-202ENST00000426763 TRBV12-3P01733 135 aa10.69□□□□□ -0.7
RPL28-202ENST00000426763 P0C879 139 aa10.69□□□□□ -0.7
RPL28-202ENST00000426763 IGKV1OR2-108A0A075B7D4 117 aa10.69□□□□□ -0.7
RPL28-202ENST00000426763 SIGLEC8Q9NYZ4 499 aa10.69□□□□□ -0.7
RPL28-202ENST00000426763 CSPG4Q6UVK1 2322 aa10.69□□□□□ -0.7
RPL28-202ENST00000426763 KLF5Q13887 457 aaPredicted RBP10.69□□□□□ -0.7
RPL28-202ENST00000426763 UTF1Q5T230 341 aa10.69□□□□□ -0.7
RPL28-202ENST00000426763 EREGO14944 169 aa10.68□□□□□ -0.7
RPL28-202ENST00000426763 ANGP03950 147 aaKnown RBP10.68□□□□□ -0.7
RPL28-202ENST00000426763 ESDP10768 282 aa10.68□□□□□ -0.7
RPL28-202ENST00000426763 UNQ9165/PRO28630Q6UXU0 137 aa10.68□□□□□ -0.7
RPL28-202ENST00000426763 Q6ZPA2 131 aa10.68□□□□□ -0.7
RPL28-202ENST00000426763 CHD3Q12873 2000 aaKnown RBP10.68□□□□□ -0.7
RPL28-202ENST00000426763 ATP5G1P05496 136 aa10.68□□□□□ -0.7
RPL28-202ENST00000426763 C9orf47Q6ZRZ4 202 aa10.68□□□□□ -0.7
RPL28-202ENST00000426763 A0A087X0K7 114 aa10.68□□□□□ -0.7
RPL28-202ENST00000426763 DLX4Q92988 240 aaPredicted RBP10.68□□□□□ -0.7
RPL28-202ENST00000426763 LINC01548A6NM66 108 aa10.67□□□□□ -0.7
RPL28-202ENST00000426763 EBI3Q14213 229 aa10.67□□□□□ -0.7
RPL28-202ENST00000426763 SMAD5-AS1Q9Y6J3 95 aa10.67□□□□□ -0.7
RPL28-202ENST00000426763 ATRXP46100 2492 aa10.67□□□□□ -0.7
RPL28-202ENST00000426763 A0A1B0GV90 55 aa10.67□□□□□ -0.7
RPL28-202ENST00000426763 TMEM61Q8N0U2 210 aa10.67□□□□□ -0.7
RPL28-202ENST00000426763 ZNF479Q96JC4 524 aa10.67□□□□□ -0.7
RPL28-202ENST00000426763 LY6LH3BQJ8 138 aa10.67□□□□□ -0.7
RPL28-202ENST00000426763 CDSNQ15517 529 aa10.67□□□□□ -0.7
RPL28-202ENST00000426763 CCDC140Q96MF4 163 aa10.67□□□□□ -0.7
RPL28-202ENST00000426763 VWC2LB2RUY7 222 aa10.66□□□□□ -0.7
RPL28-202ENST00000426763 ADAMTSL5Q6ZMM2 481 aa10.66□□□□□ -0.7
RPL28-202ENST00000426763 GATD1Q8NB37 220 aa10.66□□□□□ -0.7
RPL28-202ENST00000426763 PRAC2D3DTV9 90 aa10.66□□□□□ -0.7
RPL28-202ENST00000426763 BRWD1-AS2P59051 145 aa10.65□□□□□ -0.7
RPL28-202ENST00000426763 LY6G6DO95868 133 aa10.65□□□□□ -0.7
RPL28-202ENST00000426763 DNAJC30Q96LL9 226 aa10.65□□□□□ -0.7
RPL28-202ENST00000426763 MRPL23Q16540 153 aaKnown RBP10.65□□□□□ -0.71
RPL28-202ENST00000426763 SH2D6Q7Z4S9 175 aa10.65□□□□□ -0.71
RPL28-202ENST00000426763 ICOSQ9Y6W8 199 aa10.64□□□□□ -0.71
RPL28-202ENST00000426763 K7EMI3 77 aa10.64□□□□□ -0.71
RPL28-202ENST00000426763 IGLC2P0DOY2 106 aa10.64□□□□□ -0.71
RPL28-202ENST00000426763 ATXN8Q156A1 80 aa10.64□□□□□ -0.71
RPL28-202ENST00000426763 C1orf229Q6ZS94 237 aaPredicted RBP10.64□□□□□ -0.71
RPL28-202ENST00000426763 STPG4Q8N801 248 aa10.64□□□□□ -0.71
RPL28-202ENST00000426763 ZNF625Q96I27 306 aaPredicted RBP10.64□□□□□ -0.71
RPL28-202ENST00000426763 HERVK_113P63121 156 aa10.64□□□□□ -0.71
RPL28-202ENST00000426763 C20orf144Q9BQM9 153 aa10.63□□□□□ -0.71
RPL28-202ENST00000426763 C11orf1Q9H5F2 150 aa10.63□□□□□ -0.71
RPL28-202ENST00000426763 K7EQD1 137 aa10.63□□□□□ -0.71
RPL28-202ENST00000426763 CRLF1O75462 422 aa10.63□□□□□ -0.71
RPL28-202ENST00000426763 CRYGBP07316 175 aa10.63□□□□□ -0.71
RPL28-202ENST00000426763 EIF4EBP1Q13541 118 aaPredicted RBP10.63□□□□□ -0.71
RPL28-202ENST00000426763 Q6ZSV7 163 aa10.63□□□□□ -0.71
RPL28-202ENST00000426763 IGKV1D-37A0A075B6S9 117 aa10.63□□□□□ -0.71
RPL28-202ENST00000426763 LGALS9O00182 355 aa10.63□□□□□ -0.71
RPL28-202ENST00000426763 SPRY2O43597 315 aa10.63□□□□□ -0.71
RPL28-202ENST00000426763 GYPEP15421 78 aa10.63□□□□□ -0.71
RPL28-202ENST00000426763 ARHGAP21Q5T5U3 1957 aa10.63□□□□□ -0.71
RPL28-202ENST00000426763 DEFB135Q30KP9 77 aa10.62□□□□□ -0.71
RPL28-202ENST00000426763 SAMD5Q5TGI4 173 aa10.62□□□□□ -0.71
RPL28-202ENST00000426763 Q8N1Y9 231 aa10.62□□□□□ -0.71
RPL28-202ENST00000426763 PRR14LQ5THK1 2151 aa10.62□□□□□ -0.71
RPL28-202ENST00000426763 SRCAPQ6ZRS2 3230 aa10.62□□□□□ -0.71
RPL28-202ENST00000426763 PYY3Q5JQD4 70 aa10.62□□□□□ -0.71
RPL28-202ENST00000426763 NAV2Q8IVL1 2488 aa10.62□□□□□ -0.71
RPL28-202ENST00000426763 A0A0J9YX75 114 aa10.62□□□□□ -0.71
RPL28-202ENST00000426763 KLF12Q9Y4X4 402 aa10.62□□□□□ -0.71
RPL28-202ENST00000426763 TSPAN13O95857 204 aa10.61□□□□□ -0.71
RPL28-202ENST00000426763 ATP6V0E2Q8NHE4 81 aa10.61□□□□□ -0.71
RPL28-202ENST00000426763 MAP6D1Q9H9H5 199 aa10.61□□□□□ -0.71
RPL28-202ENST00000426763 CCL18P55774 89 aa10.61□□□□□ -0.71
RPL28-202ENST00000426763 LGALS9BQ3B8N2 356 aa10.61□□□□□ -0.71
RPL28-202ENST00000426763 LGALS9CQ6DKI2 356 aa10.61□□□□□ -0.71
RPL28-202ENST00000426763 SUMO4Q6EEV6 95 aa10.61□□□□□ -0.71
RPL28-202ENST00000426763 PFN2P35080 140 aa10.61□□□□□ -0.71
RPL28-202ENST00000426763 CLPSL2Q6UWE3 100 aa10.61□□□□□ -0.71
RPL28-202ENST00000426763 PLA2G2EQ9NZK7 142 aa10.61□□□□□ -0.71
RPL28-202ENST00000426763 OVOL2Q9BRP0 275 aa10.61□□□□□ -0.71
RPL28-202ENST00000426763 IGKV2D-24A0A075B6R9 120 aa10.6□□□□□ -0.71
RPL28-202ENST00000426763 F8VRH5 84 aa10.6□□□□□ -0.71
RPL28-202ENST00000426763 SHISA2Q6UWI4 295 aa10.6□□□□□ -0.71
RPL28-202ENST00000426763 TRBV6-1A0A0K0K1D8 114 aa10.6□□□□□ -0.71
RPL28-202ENST00000426763 MED14OSP0DP75 135 aa10.6□□□□□ -0.71
RPL28-202ENST00000426763 Q6ZQT7 251 aa10.6□□□□□ -0.71
RPL28-202ENST00000426763 NKAPP1Q8N9T2 125 aa10.6□□□□□ -0.71
RPL28-202ENST00000426763 MRPL35Q9NZE8 188 aaKnown RBP10.59□□□□□ -0.71
RPL28-202ENST00000426763 DAZ2Q13117 558 aaKnown RBP10.59□□□□□ -0.71
RPL28-202ENST00000426763 DAZ4Q86SG3 579 aaKnown RBP10.59□□□□□ -0.71
RPL28-202ENST00000426763 DAZ3Q9NR90 486 aaKnown RBP10.59□□□□□ -0.71
RPL28-202ENST00000426763 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.59□□□□□ -0.71
RPL28-202ENST00000426763 IGKV2-29A2NJV5 120 aaPredicted RBP10.59□□□□□ -0.71
RPL28-202ENST00000426763 NDUFA12Q9UI09 145 aa10.59□□□□□ -0.71
RPL28-202ENST00000426763 F8WEM9 126 aa10.59□□□□□ -0.71
RPL28-202ENST00000426763 TTC32Q5I0X7 151 aa10.59□□□□□ -0.71
RPL28-202ENST00000426763 DEFB1P60022 68 aa10.59□□□□□ -0.71
RPL28-202ENST00000426763 SPANXA1Q9NS26 97 aa10.59□□□□□ -0.71
RPL28-202ENST00000426763 PRSS29PA6NIE9 313 aa10.58□□□□□ -0.72
RPL28-202ENST00000426763 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
RPL28-202ENST00000426763 DEFB125Q8N687 156 aa10.58□□□□□ -0.72
RPL28-202ENST00000426763 PIEZO2Q9H5I5 2752 aa10.58□□□□□ -0.72
RPL28-202ENST00000426763 H3BMM0 161 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms