RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
GPC1-203ENST00000425056 KANTRA0A1W2PQU2 76 aa11.91□□□□□ -0.5
GPC1-203ENST00000425056 MBP02144 154 aa11.91□□□□□ -0.5
GPC1-203ENST00000425056 SERF2P84101 59 aa11.91□□□□□ -0.5
GPC1-203ENST00000425056 FLI1Q01543 452 aaPredicted RBP11.91□□□□□ -0.5
GPC1-203ENST00000425056 CYB561D1Q8N8Q1 229 aa11.91□□□□□ -0.5
GPC1-203ENST00000425056 TMEM75Q8N9X5 138 aa11.91□□□□□ -0.5
GPC1-203ENST00000425056 PTH2Q96A98 100 aa11.91□□□□□ -0.5
GPC1-203ENST00000425056 TMEM167BQ9NRX6 74 aa11.91□□□□□ -0.5
GPC1-203ENST00000425056 LRCOL1A6NCL2 159 aa11.9□□□□□ -0.5
GPC1-203ENST00000425056 IBA57-AS1B1ANH7 110 aa11.9□□□□□ -0.5
GPC1-203ENST00000425056 GCSHP23434 173 aa11.9□□□□□ -0.5
GPC1-203ENST00000425056 SMUG1Q53HV7 270 aa11.9□□□□□ -0.5
GPC1-203ENST00000425056 ZNF506Q5JVG8 444 aa11.9□□□□□ -0.5
GPC1-203ENST00000425056 EPDR1Q9UM22 224 aa11.9□□□□□ -0.5
GPC1-203ENST00000425056 TRAV8-6A0A0B4J262 113 aa11.89□□□□□ -0.51
GPC1-203ENST00000425056 BCL2L11O43521 198 aa11.89□□□□□ -0.51
GPC1-203ENST00000425056 PSCAO43653 123 aa11.89□□□□□ -0.51
GPC1-203ENST00000425056 CXorf1O96002 111 aa11.89□□□□□ -0.51
GPC1-203ENST00000425056 RNASE3P12724 160 aaKnown RBP11.89□□□□□ -0.51
GPC1-203ENST00000425056 SUMO1P63165 101 aaKnown RBP11.89□□□□□ -0.51
GPC1-203ENST00000425056 EIF5AP63241 154 aaKnown RBP11.89□□□□□ -0.51
GPC1-203ENST00000425056 LGALSLQ3ZCW2 172 aaPredicted RBP11.89□□□□□ -0.51
GPC1-203ENST00000425056 LELP1Q5T871 98 aa11.89□□□□□ -0.51
GPC1-203ENST00000425056 Q5VSD8 79 aa11.89□□□□□ -0.51
GPC1-203ENST00000425056 TMUB2Q71RG4 321 aa11.89□□□□□ -0.51
GPC1-203ENST00000425056 SH3BGRL3Q9H299 93 aa11.89□□□□□ -0.51
GPC1-203ENST00000425056 PGPEP1LA6NFU8 196 aa11.88□□□□□ -0.51
GPC1-203ENST00000425056 MGST1P10620 155 aaKnown RBP11.88□□□□□ -0.51
GPC1-203ENST00000425056 OR10J3Q5JRS4 329 aa11.88□□□□□ -0.51
GPC1-203ENST00000425056 PRNTQ86SH4 94 aa11.88□□□□□ -0.51
GPC1-203ENST00000425056 C9orf62Q8N4C0 152 aa11.88□□□□□ -0.51
GPC1-203ENST00000425056 NTN5Q8WTR8 489 aaPredicted RBP11.88□□□□□ -0.51
GPC1-203ENST00000425056 FRZBQ92765 325 aa11.88□□□□□ -0.51
GPC1-203ENST00000425056 ACTR3CQ9C0K3 210 aaPredicted RBP11.88□□□□□ -0.51
GPC1-203ENST00000425056 IGHV3-73A0A0B4J1V6 119 aa11.87□□□□□ -0.51
GPC1-203ENST00000425056 SAPCD1Q5SSQ6 148 aa11.87□□□□□ -0.51
GPC1-203ENST00000425056 RPL7L1Q6DKI1 246 aaKnown RBP11.87□□□□□ -0.51
GPC1-203ENST00000425056 IGLV5-52A0A0A0MRZ9 124 aa11.86□□□□□ -0.51
GPC1-203ENST00000425056 A0A1W2PRE2 83 aa11.86□□□□□ -0.51
GPC1-203ENST00000425056 INAFM2P0DMQ5 153 aa11.86□□□□□ -0.51
GPC1-203ENST00000425056 LAGE3Q14657 143 aa11.86□□□□□ -0.51
GPC1-203ENST00000425056 ZNF471Q9BX82 626 aaPredicted RBP11.86□□□□□ -0.51
GPC1-203ENST00000425056 GTSF1LQ9H1H1 148 aa11.86□□□□□ -0.51
GPC1-203ENST00000425056 Q9HAA7 133 aa11.86□□□□□ -0.51
GPC1-203ENST00000425056 CYTL1Q9NRR1 136 aa11.86□□□□□ -0.51
GPC1-203ENST00000425056 PIK3CD-AS1Q5SR53 167 aa11.85□□□□□ -0.51
GPC1-203ENST00000425056 ATP6V0E2Q8NHE4 81 aa11.85□□□□□ -0.51
GPC1-203ENST00000425056 TMEM70Q9BUB7 260 aa11.85□□□□□ -0.51
GPC1-203ENST00000425056 PARLQ9H300 379 aa11.85□□□□□ -0.51
GPC1-203ENST00000425056 HERC1Q15751 4861 aa11.85□□□□□ -0.51
GPC1-203ENST00000425056 VPS13BQ7Z7G8 4022 aa11.84□□□□□ -0.51
GPC1-203ENST00000425056 IGKV3D-20A0A0C4DH25 116 aa11.84□□□□□ -0.51
GPC1-203ENST00000425056 IGHV3-30P01768 117 aa11.84□□□□□ -0.51
GPC1-203ENST00000425056 IGHV3-33P01772 117 aa11.84□□□□□ -0.51
GPC1-203ENST00000425056 LINC00694P0DN24 101 aa11.84□□□□□ -0.51
GPC1-203ENST00000425056 IGHV3-30-3P0DP02 117 aa11.84□□□□□ -0.51
GPC1-203ENST00000425056 IGHV3-30-5P0DP03 117 aa11.84□□□□□ -0.51
GPC1-203ENST00000425056 NKX2-5P52952 324 aaPredicted RBP11.84□□□□□ -0.51
GPC1-203ENST00000425056 ZFP2Q6ZN57 461 aa11.84□□□□□ -0.51
GPC1-203ENST00000425056 Q8N814 137 aa11.84□□□□□ -0.51
GPC1-203ENST00000425056 ARL2-SNX15V9GYD0 113 aa11.84□□□□□ -0.51
GPC1-203ENST00000425056 DMBT1Q9UGM3 2413 aaPredicted RBP11.84□□□□□ -0.51
GPC1-203ENST00000425056 A8MWV9 139 aa11.83□□□□□ -0.52
GPC1-203ENST00000425056 TPT1P13693 172 aaKnown RBP11.83□□□□□ -0.52
GPC1-203ENST00000425056 ZNF726P1Q15940 193 aa11.83□□□□□ -0.52
GPC1-203ENST00000425056 SLC51BQ86UW2 128 aa11.83□□□□□ -0.52
GPC1-203ENST00000425056 STOML3Q8TAV4 291 aa11.83□□□□□ -0.52
GPC1-203ENST00000425056 LINC00479Q96M42 142 aa11.83□□□□□ -0.52
GPC1-203ENST00000425056 TRAV34A0A0B4J273 112 aa11.82□□□□□ -0.52
GPC1-203ENST00000425056 CTXND1A0A1B0GTU2 59 aa11.82□□□□□ -0.52
GPC1-203ENST00000425056 S100A4P26447 101 aaKnown RBP11.82□□□□□ -0.52
GPC1-203ENST00000425056 Q6ZSN1 163 aa11.82□□□□□ -0.52
GPC1-203ENST00000425056 Q86TA4 180 aa11.82□□□□□ -0.52
GPC1-203ENST00000425056 FABP5P3A8MUU1 101 aa11.81□□□□□ -0.52
GPC1-203ENST00000425056 PEX7O00628 323 aa11.81□□□□□ -0.52
GPC1-203ENST00000425056 SMR3BP02814 79 aaPredicted RBP11.81□□□□□ -0.52
GPC1-203ENST00000425056 ASIPP42127 132 aa11.81□□□□□ -0.52
GPC1-203ENST00000425056 EIF5AL1Q6IS14 154 aaKnown RBP11.81□□□□□ -0.52
GPC1-203ENST00000425056 UFSP1Q6NVU6 142 aa11.81□□□□□ -0.52
GPC1-203ENST00000425056 IL36BQ9NZH7 164 aa11.81□□□□□ -0.52
GPC1-203ENST00000425056 IFNA7P01567 189 aa11.8□□□□□ -0.52
GPC1-203ENST00000425056 SEC11BP0C7V7 166 aa11.8□□□□□ -0.52
GPC1-203ENST00000425056 HAMPP81172 84 aa11.8□□□□□ -0.52
GPC1-203ENST00000425056 Q8N3U1 123 aa11.8□□□□□ -0.52
GPC1-203ENST00000425056 MYCBP2O75592 4640 aa11.8□□□□□ -0.52
GPC1-203ENST00000425056 GAGE12JA6NER3 117 aa11.79□□□□□ -0.52
GPC1-203ENST00000425056 UBE2G2P60604 165 aa11.79□□□□□ -0.52
GPC1-203ENST00000425056 GAGE1Q13065 139 aa11.79□□□□□ -0.52
GPC1-203ENST00000425056 GAGE4Q13068 117 aa11.79□□□□□ -0.52
GPC1-203ENST00000425056 GAGE5Q13069 117 aa11.79□□□□□ -0.52
GPC1-203ENST00000425056 GAGE13Q4V321 117 aa11.79□□□□□ -0.52
GPC1-203ENST00000425056 DNLZQ5SXM8 178 aa11.79□□□□□ -0.52
GPC1-203ENST00000425056 HIST1H2BAQ96A08 127 aa11.79□□□□□ -0.52
GPC1-203ENST00000425056 TM2D2Q9BX73 214 aa11.79□□□□□ -0.52
GPC1-203ENST00000425056 NKX6-2Q9C056 277 aaPredicted RBP11.79□□□□□ -0.52
GPC1-203ENST00000425056 SRRM2Q9UQ35 2752 aaKnown RBP11.79□□□□□ -0.52
GPC1-203ENST00000425056 FAM74A7A6NL05 159 aa11.78□□□□□ -0.52
GPC1-203ENST00000425056 B4DEV8 164 aa11.78□□□□□ -0.52
GPC1-203ENST00000425056 H3BVH4 76 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms