RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ZNF492Q9P255 531 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 MGAT4CQ9UBM8 478 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 IGLV10-54A0A075B6I4 117 aa3.86□□□□□ -1.79
SDCBP-203ENST00000424270 DIRC3C9JPN6 131 aa3.86□□□□□ -1.79
SDCBP-203ENST00000424270 CD3DP04234 171 aa3.86□□□□□ -1.79
SDCBP-203ENST00000424270 CRYGAP11844 174 aa3.86□□□□□ -1.79
SDCBP-203ENST00000424270 TAGLN2P37802 199 aaKnown RBP3.86□□□□□ -1.79
SDCBP-203ENST00000424270 CAMPP49913 170 aa3.86□□□□□ -1.79
SDCBP-203ENST00000424270 LINC00299Q6ZSB3 139 aa3.86□□□□□ -1.79
SDCBP-203ENST00000424270 LYZL2Q7Z4W2 148 aa3.86□□□□□ -1.79
SDCBP-203ENST00000424270 FER1L6-AS1Q8NA97 138 aa3.86□□□□□ -1.79
SDCBP-203ENST00000424270 DIRC1Q969H9 104 aa3.86□□□□□ -1.79
SDCBP-203ENST00000424270 C9orf85Q96MD7 179 aa3.86□□□□□ -1.79
SDCBP-203ENST00000424270 SAMD10Q9BYL1 202 aa3.86□□□□□ -1.79
SDCBP-203ENST00000424270 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
SDCBP-203ENST00000424270 IGLV1-50A0A075B6I6 118 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 TRBV19A0A075B6N1 114 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 A0A0B4J2A0 478 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 F8WDY8 70 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 H3BMQ9 156 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 HOXB5P09067 269 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 ANXA3P12429 323 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 CSN1S1P47710 185 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 RAB5CP51148 216 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 CTAG1AP78358 180 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 ZNF266Q14584 549 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 NEDD8Q15843 81 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 C1orf137Q5JT78 98 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 Q6ZRG5 221 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 LHFPL1Q86WI0 220 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 C12orf45Q8N5I9 185 aaPredicted RBP3.85□□□□□ -1.79
SDCBP-203ENST00000424270 PRSS3P2Q8NHM4 247 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 ASB13Q8WXK3 278 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 KCNS1Q96KK3 526 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 CHCHD5Q9BSY4 110 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 FUNDC2Q9BWH2 189 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 CCDC59Q9P031 241 aaKnown RBP3.85□□□□□ -1.79
SDCBP-203ENST00000424270 LINC00474Q9P2X8 69 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 SHPKQ9UHJ6 478 aa3.85□□□□□ -1.79
SDCBP-203ENST00000424270 SYNGR2O43760 224 aa3.84□□□□□ -1.79
SDCBP-203ENST00000424270 RAB3DO95716 219 aa3.84□□□□□ -1.79
SDCBP-203ENST00000424270 TYMSP04818 313 aa3.84□□□□□ -1.79
SDCBP-203ENST00000424270 RPL13AP40429 203 aaKnown RBP3.84□□□□□ -1.79
SDCBP-203ENST00000424270 CAV2P51636 162 aa3.84□□□□□ -1.79
SDCBP-203ENST00000424270 SRPXP78539 464 aa3.84□□□□□ -1.79
SDCBP-203ENST00000424270 LGALSLQ3ZCW2 172 aaPredicted RBP3.84□□□□□ -1.79
SDCBP-203ENST00000424270 MPV17L2Q567V2 206 aa3.84□□□□□ -1.79
SDCBP-203ENST00000424270 MLST8Q9BVC4 326 aa3.84□□□□□ -1.79
SDCBP-203ENST00000424270 NPVFQ9HCQ7 196 aa3.84□□□□□ -1.79
SDCBP-203ENST00000424270 TRAV21A0A0B4J279 112 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 PIGBOS1A0A0B4J2F0 54 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 DISC1C4P0D8 188 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 PRSS46E5RG02 174 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 STAG3L3P0CL85 134 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 RPS10P46783 165 aaKnown RBP3.83□□□□□ -1.8
SDCBP-203ENST00000424270 PKIAP61925 76 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 EIF5AP63241 154 aaKnown RBP3.83□□□□□ -1.8
SDCBP-203ENST00000424270 CTF1Q16619 201 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 ZNF506Q5JVG8 444 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 Q6AWC8 147 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 LINC00269Q8N2A0 174 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.83□□□□□ -1.8
SDCBP-203ENST00000424270 OR1L4Q8NGR5 311 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 S100ZQ8WXG8 99 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 RTBDNQ9BSG5 229 aaPredicted RBP3.83□□□□□ -1.8
SDCBP-203ENST00000424270 CTDSP1Q9GZU7 261 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 PSENENQ9NZ42 101 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 PKIGQ9Y2B9 76 aa3.83□□□□□ -1.8
SDCBP-203ENST00000424270 A0A096LNI7 61 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 TRBV7-9A0A0J9YWB2 115 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 SERTM2A0A1B0GWG4 89 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 FAM25AB3EWG3 89 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 FAM25CB3EWG5 89 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 FAM25GB3EWG6 89 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 CTDSPLO15194 276 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 PYYP10082 97 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 TAS2R19P59542 299 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 HIGD2BQ4VC39 106 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 FAM74A4Q5TZK3 123 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 FAAP20Q6NZ36 180 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 C14orf178Q8N769 122 aaPredicted RBP3.82□□□□□ -1.8
SDCBP-203ENST00000424270 PFDN5Q99471 154 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 NAA50Q9GZZ1 169 aaKnown RBP3.82□□□□□ -1.8
SDCBP-203ENST00000424270 VCX2Q9H322 139 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 COMMD3Q9UBI1 195 aa3.82□□□□□ -1.8
SDCBP-203ENST00000424270 A8MWV9 139 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 HSBP1L1C9JCN9 74 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 F6UZH7 168 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 SSSCA1O60232 199 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 NDUFB4O95168 129 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 PTTG1O95997 202 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 SLPIP03973 132 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 METTL15P1P0C7V9 234 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 LINC00694P0DN24 101 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 S100A5P33763 92 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 S100A10P60903 97 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 RPL36AP83881 106 aaKnown RBP3.81□□□□□ -1.8
SDCBP-203ENST00000424270 CYCSP99999 105 aaKnown RBP3.81□□□□□ -1.8
SDCBP-203ENST00000424270 PDE6HQ13956 83 aa3.81□□□□□ -1.8
SDCBP-203ENST00000424270 SPCS2Q15005 226 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms