RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SMR3BP02814 79 aaPredicted RBP10.86□□□□□ -0.67
COL18A1-205ENST00000423214 PFN1P07737 140 aaKnown RBP10.86□□□□□ -0.67
COL18A1-205ENST00000423214 UBE2G2P60604 165 aa10.86□□□□□ -0.67
COL18A1-205ENST00000423214 ZNF876PQ49A33 203 aa10.86□□□□□ -0.67
COL18A1-205ENST00000423214 ZFP69Q49AA0 526 aa10.86□□□□□ -0.67
COL18A1-205ENST00000423214 AKR1C8PQ5T2L2 129 aa10.86□□□□□ -0.67
COL18A1-205ENST00000423214 PRNTQ86SH4 94 aa10.86□□□□□ -0.67
COL18A1-205ENST00000423214 FLG2Q5D862 2391 aaPredicted RBP10.85□□□□□ -0.67
COL18A1-205ENST00000423214 K7EQM0 130 aa10.85□□□□□ -0.67
COL18A1-205ENST00000423214 CIDEAO60543 219 aa10.85□□□□□ -0.67
COL18A1-205ENST00000423214 ZNF80P51504 273 aaPredicted RBP10.85□□□□□ -0.67
COL18A1-205ENST00000423214 HAMPP81172 84 aa10.85□□□□□ -0.67
COL18A1-205ENST00000423214 SLC25A29Q8N8R3 303 aa10.85□□□□□ -0.67
COL18A1-205ENST00000423214 LINC00479Q96M42 142 aa10.85□□□□□ -0.67
COL18A1-205ENST00000423214 TRAV34A0A0B4J273 112 aa10.84□□□□□ -0.67
COL18A1-205ENST00000423214 IBA57-AS1B1ANH7 110 aa10.84□□□□□ -0.67
COL18A1-205ENST00000423214 FAM229AH3BQW9 127 aa10.84□□□□□ -0.67
COL18A1-205ENST00000423214 IGLV2-11P01706 119 aa10.84□□□□□ -0.67
COL18A1-205ENST00000423214 FLI1Q01543 452 aaPredicted RBP10.84□□□□□ -0.67
COL18A1-205ENST00000423214 OR11H4Q8NGC9 324 aa10.84□□□□□ -0.67
COL18A1-205ENST00000423214 TMEM70Q9BUB7 260 aa10.84□□□□□ -0.67
COL18A1-205ENST00000423214 IGHV3-73A0A0B4J1V6 119 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 TRBV6-4A0A1B0GX49 114 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 A0A1W2PRE2 83 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 LRCOL1A6NCL2 159 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 RS1O15537 224 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 GCGP01275 180 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 IFNA7P01567 189 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 IGHV3-30P01768 117 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 IGHV3-33P01772 117 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 IGHV3-30-3P0DP02 117 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 IGHV3-30-5P0DP03 117 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 CFAP126Q5VTH2 177 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 Q6ZSN1 163 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 Q8N814 137 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 CYB561D1Q8N8Q1 229 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 C11orf21Q9P2W6 132 aa10.83□□□□□ -0.68
COL18A1-205ENST00000423214 LELP1Q5T871 98 aa10.82□□□□□ -0.68
COL18A1-205ENST00000423214 KCNRGQ8N5I3 272 aa10.82□□□□□ -0.68
COL18A1-205ENST00000423214 TMEM75Q8N9X5 138 aa10.82□□□□□ -0.68
COL18A1-205ENST00000423214 MAP1LC3B2A6NCE7 125 aa10.81□□□□□ -0.68
COL18A1-205ENST00000423214 MGST1P10620 155 aaKnown RBP10.81□□□□□ -0.68
COL18A1-205ENST00000423214 FHITP49789 147 aa10.81□□□□□ -0.68
COL18A1-205ENST00000423214 LAGE3Q14657 143 aa10.81□□□□□ -0.68
COL18A1-205ENST00000423214 SMUG1Q53HV7 270 aa10.81□□□□□ -0.68
COL18A1-205ENST00000423214 ZNF506Q5JVG8 444 aa10.81□□□□□ -0.68
COL18A1-205ENST00000423214 ATP6V0E2Q8NHE4 81 aa10.81□□□□□ -0.68
COL18A1-205ENST00000423214 C9orf85Q96MD7 179 aa10.81□□□□□ -0.68
COL18A1-205ENST00000423214 MAP1LC3BQ9GZQ8 125 aa10.81□□□□□ -0.68
COL18A1-205ENST00000423214 MYCBP2O75592 4640 aa10.8□□□□□ -0.68
COL18A1-205ENST00000423214 FAM74A7A6NL05 159 aa10.8□□□□□ -0.68
COL18A1-205ENST00000423214 DPPA3Q6W0C5 159 aa10.8□□□□□ -0.68
COL18A1-205ENST00000423214 GTSF1LQ9H1H1 148 aa10.8□□□□□ -0.68
COL18A1-205ENST00000423214 SRRM2Q9UQ35 2752 aaKnown RBP10.8□□□□□ -0.68
COL18A1-205ENST00000423214 PGPEP1LA6NFU8 196 aa10.79□□□□□ -0.68
COL18A1-205ENST00000423214 HMSDA8MTL9 139 aa10.79□□□□□ -0.68
COL18A1-205ENST00000423214 PEX7O00628 323 aa10.79□□□□□ -0.68
COL18A1-205ENST00000423214 ZNF345Q14585 488 aa10.79□□□□□ -0.68
COL18A1-205ENST00000423214 SAPCD1Q5SSQ6 148 aa10.79□□□□□ -0.68
COL18A1-205ENST00000423214 TM2D2Q9BX73 214 aa10.79□□□□□ -0.68
COL18A1-205ENST00000423214 ARL2-SNX15V9GYD0 113 aa10.79□□□□□ -0.68
COL18A1-205ENST00000423214 S100A4P26447 101 aaKnown RBP10.78□□□□□ -0.68
COL18A1-205ENST00000423214 ZNF471Q9BX82 626 aaPredicted RBP10.78□□□□□ -0.68
COL18A1-205ENST00000423214 A0A0D9SG52 128 aa10.77□□□□□ -0.69
COL18A1-205ENST00000423214 A0A1B0GV50 99 aa10.77□□□□□ -0.69
COL18A1-205ENST00000423214 KANTRA0A1W2PQU2 76 aa10.77□□□□□ -0.69
COL18A1-205ENST00000423214 CST9LP1Q5W188 147 aa10.77□□□□□ -0.69
COL18A1-205ENST00000423214 STOML3Q8TAV4 291 aa10.77□□□□□ -0.69
COL18A1-205ENST00000423214 FAM213BQ8TBF2 198 aa10.77□□□□□ -0.69
COL18A1-205ENST00000423214 PTH2Q96A98 100 aa10.77□□□□□ -0.69
COL18A1-205ENST00000423214 A8MWV9 139 aa10.76□□□□□ -0.69
COL18A1-205ENST00000423214 BCL2L11O43521 198 aa10.76□□□□□ -0.69
COL18A1-205ENST00000423214 SEC11BP0C7V7 166 aa10.76□□□□□ -0.69
COL18A1-205ENST00000423214 RNASE3P12724 160 aaKnown RBP10.76□□□□□ -0.69
COL18A1-205ENST00000423214 LGALSLQ3ZCW2 172 aaPredicted RBP10.76□□□□□ -0.69
COL18A1-205ENST00000423214 SFT2D1Q8WV19 159 aa10.76□□□□□ -0.69
COL18A1-205ENST00000423214 HIST1H2BAQ96A08 127 aa10.76□□□□□ -0.69
COL18A1-205ENST00000423214 NKX6-2Q9C056 277 aaPredicted RBP10.76□□□□□ -0.69
COL18A1-205ENST00000423214 PARLQ9H300 379 aa10.76□□□□□ -0.69
COL18A1-205ENST00000423214 IGKV3D-20A0A0C4DH25 116 aa10.75□□□□□ -0.69
COL18A1-205ENST00000423214 GAGE12JA6NER3 117 aa10.75□□□□□ -0.69
COL18A1-205ENST00000423214 ASIPP42127 132 aa10.75□□□□□ -0.69
COL18A1-205ENST00000423214 GAGE1Q13065 139 aa10.75□□□□□ -0.69
COL18A1-205ENST00000423214 GAGE4Q13068 117 aa10.75□□□□□ -0.69
COL18A1-205ENST00000423214 GAGE5Q13069 117 aa10.75□□□□□ -0.69
COL18A1-205ENST00000423214 GAGE13Q4V321 117 aa10.75□□□□□ -0.69
COL18A1-205ENST00000423214 TOR2AQ5JU69 321 aa10.75□□□□□ -0.69
COL18A1-205ENST00000423214 ZFP2Q6ZN57 461 aa10.75□□□□□ -0.69
COL18A1-205ENST00000423214 TMUB2Q71RG4 321 aa10.75□□□□□ -0.69
COL18A1-205ENST00000423214 Q86TA4 180 aa10.75□□□□□ -0.69
COL18A1-205ENST00000423214 TRAV8-3A0A0A6YYJ7 113 aa10.74□□□□□ -0.69
COL18A1-205ENST00000423214 FABP5P3A8MUU1 101 aa10.74□□□□□ -0.69
COL18A1-205ENST00000423214 PAGE4O60829 102 aa10.74□□□□□ -0.69
COL18A1-205ENST00000423214 PFDN1O60925 122 aa10.74□□□□□ -0.69
COL18A1-205ENST00000423214 C1QBP02746 253 aa10.74□□□□□ -0.69
COL18A1-205ENST00000423214 CRIP1P50238 77 aa10.74□□□□□ -0.69
COL18A1-205ENST00000423214 ZC2HC1AQ96GY0 325 aa10.74□□□□□ -0.69
COL18A1-205ENST00000423214 LECT2O14960 151 aa10.73□□□□□ -0.69
COL18A1-205ENST00000423214 UBE2G1P62253 170 aa10.73□□□□□ -0.69
COL18A1-205ENST00000423214 PIK3CD-AS1Q5SR53 167 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms