RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 GGTLC3B5MD39 225 aa11.1□□□□□ -0.63
UPF3AP3-201ENST00000420996 MPC2O95563 127 aa11.1□□□□□ -0.63
UPF3AP3-201ENST00000420996 PET100P0DJ07 73 aa11.1□□□□□ -0.63
UPF3AP3-201ENST00000420996 RNASE3P12724 160 aaKnown RBP11.1□□□□□ -0.63
UPF3AP3-201ENST00000420996 ZFP2Q6ZN57 461 aa11.1□□□□□ -0.63
UPF3AP3-201ENST00000420996 GAGE12JA6NER3 117 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 K7EQM0 130 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 HMGB3O15347 200 aaKnown RBP11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 TCRAP04437 139 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 LINC00694P0DN24 101 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 RAB2AP61019 212 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 GAGE1Q13065 139 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 GAGE4Q13068 117 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 GAGE5Q13069 117 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 LINC01620Q4KN68 170 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 GAGE13Q4V321 117 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 SMUG1Q53HV7 270 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 SCXQ7RTU7 201 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 TMEM75Q8N9X5 138 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 C5orf17Q8NAS9 161 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 BAALCQ8WXS3 180 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 PARLQ9H300 379 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 WFDC1Q9HC57 220 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 PSG8Q9UQ74 426 aa11.09□□□□□ -0.63
UPF3AP3-201ENST00000420996 A0A087WWC5 75 aa11.08□□□□□ -0.64
UPF3AP3-201ENST00000420996 A8MWV9 139 aa11.08□□□□□ -0.64
UPF3AP3-201ENST00000420996 PIK3CD-AS1Q5SR53 167 aa11.08□□□□□ -0.64
UPF3AP3-201ENST00000420996 SYT8Q8NBV8 401 aa11.08□□□□□ -0.64
UPF3AP3-201ENST00000420996 OR10G9Q8NGN4 311 aa11.08□□□□□ -0.64
UPF3AP3-201ENST00000420996 OR10G7Q8NGN6 311 aa11.08□□□□□ -0.64
UPF3AP3-201ENST00000420996 RBFOX3A6NFN3 312 aa11.07□□□□□ -0.64
UPF3AP3-201ENST00000420996 INMT-MINDY4F8WBC2 141 aa11.07□□□□□ -0.64
UPF3AP3-201ENST00000420996 IGLV2-11P01706 119 aa11.07□□□□□ -0.64
UPF3AP3-201ENST00000420996 ARL14EPLP0DKL9 152 aa11.07□□□□□ -0.64
UPF3AP3-201ENST00000420996 ZFP69Q49AA0 526 aa11.07□□□□□ -0.64
UPF3AP3-201ENST00000420996 CYB561D1Q8N8Q1 229 aa11.07□□□□□ -0.64
UPF3AP3-201ENST00000420996 Q8N976 141 aa11.07□□□□□ -0.64
UPF3AP3-201ENST00000420996 RMI2Q96E14 147 aa11.07□□□□□ -0.64
UPF3AP3-201ENST00000420996 CHAC1Q9BUX1 264 aa11.07□□□□□ -0.64
UPF3AP3-201ENST00000420996 RNF222A6NCQ9 220 aa11.06□□□□□ -0.64
UPF3AP3-201ENST00000420996 STAG3L2P0CL84 134 aa11.06□□□□□ -0.64
UPF3AP3-201ENST00000420996 STAG3L3P0CL85 134 aa11.06□□□□□ -0.64
UPF3AP3-201ENST00000420996 FGF8P55075 233 aaPredicted RBP11.06□□□□□ -0.64
UPF3AP3-201ENST00000420996 KRTAP10-4P60372 401 aaPredicted RBP11.06□□□□□ -0.64
UPF3AP3-201ENST00000420996 FLI1Q01543 452 aaPredicted RBP11.06□□□□□ -0.64
UPF3AP3-201ENST00000420996 OR2T35Q8NGX2 323 aa11.06□□□□□ -0.64
UPF3AP3-201ENST00000420996 SUN5Q8TC36 379 aa11.06□□□□□ -0.64
UPF3AP3-201ENST00000420996 LINC00479Q96M42 142 aa11.06□□□□□ -0.64
UPF3AP3-201ENST00000420996 Q9UF83 564 aa11.06□□□□□ -0.64
UPF3AP3-201ENST00000420996 OXTP01178 125 aa11.05□□□□□ -0.64
UPF3AP3-201ENST00000420996 CDC34P49427 236 aaPredicted RBP11.05□□□□□ -0.64
UPF3AP3-201ENST00000420996 LGALSLQ3ZCW2 172 aaPredicted RBP11.05□□□□□ -0.64
UPF3AP3-201ENST00000420996 SAPCD1Q5SSQ6 148 aa11.05□□□□□ -0.64
UPF3AP3-201ENST00000420996 PRNTQ86SH4 94 aa11.05□□□□□ -0.64
UPF3AP3-201ENST00000420996 EPDR1Q9UM22 224 aa11.05□□□□□ -0.64
UPF3AP3-201ENST00000420996 SEC11BP0C7V7 166 aa11.04□□□□□ -0.64
UPF3AP3-201ENST00000420996 S100A4P26447 101 aaKnown RBP11.04□□□□□ -0.64
UPF3AP3-201ENST00000420996 GCHFRP30047 84 aa11.04□□□□□ -0.64
UPF3AP3-201ENST00000420996 SUMO1P63165 101 aaKnown RBP11.04□□□□□ -0.64
UPF3AP3-201ENST00000420996 UFSP1Q6NVU6 142 aa11.04□□□□□ -0.64
UPF3AP3-201ENST00000420996 CIRBP-AS1Q8TBR5 109 aa11.04□□□□□ -0.64
UPF3AP3-201ENST00000420996 MARVELD1Q9BSK0 173 aa11.04□□□□□ -0.64
UPF3AP3-201ENST00000420996 SAMD10Q9BYL1 202 aa11.04□□□□□ -0.64
UPF3AP3-201ENST00000420996 URGCP-MRPS24S4R325 110 aa11.04□□□□□ -0.64
UPF3AP3-201ENST00000420996 IGKV2D-24A0A075B6R9 120 aa11.03□□□□□ -0.64
UPF3AP3-201ENST00000420996 IGKV3D-20A0A0C4DH25 116 aa11.03□□□□□ -0.64
UPF3AP3-201ENST00000420996 SSNA1O43805 119 aa11.03□□□□□ -0.64
UPF3AP3-201ENST00000420996 NIT1Q86X76 327 aa11.03□□□□□ -0.64
UPF3AP3-201ENST00000420996 C14orf178Q8N769 122 aaPredicted RBP11.03□□□□□ -0.64
UPF3AP3-201ENST00000420996 RAB24Q969Q5 203 aa11.03□□□□□ -0.64
UPF3AP3-201ENST00000420996 JPT2Q9H910 190 aa11.03□□□□□ -0.64
UPF3AP3-201ENST00000420996 ASIPP42127 132 aa11.02□□□□□ -0.65
UPF3AP3-201ENST00000420996 OR2G3Q8NGZ4 309 aa11.02□□□□□ -0.65
UPF3AP3-201ENST00000420996 DNAJC30Q96LL9 226 aa11.02□□□□□ -0.65
UPF3AP3-201ENST00000420996 KLK12Q9UKR0 248 aa11.02□□□□□ -0.65
UPF3AP3-201ENST00000420996 FABP5P3A8MUU1 101 aa11.01□□□□□ -0.65
UPF3AP3-201ENST00000420996 TMEM167BQ9NRX6 74 aa11.01□□□□□ -0.65
UPF3AP3-201ENST00000420996 IL36BQ9NZH7 164 aa11.01□□□□□ -0.65
UPF3AP3-201ENST00000420996 RHODO00212 210 aa11□□□□□ -0.65
UPF3AP3-201ENST00000420996 IGLV2-8P01709 118 aa11□□□□□ -0.65
UPF3AP3-201ENST00000420996 DMRTA1Q5VZB9 504 aa11□□□□□ -0.65
UPF3AP3-201ENST00000420996 UBE2WQ96B02 151 aa11□□□□□ -0.65
UPF3AP3-201ENST00000420996 CHCHD7Q9BUK0 85 aa11□□□□□ -0.65
UPF3AP3-201ENST00000420996 LRP1Q07954 4544 aaKnown RBP11□□□□□ -0.65
UPF3AP3-201ENST00000420996 CXorf1O96002 111 aa10.99□□□□□ -0.65
UPF3AP3-201ENST00000420996 MBP02144 154 aa10.99□□□□□ -0.65
UPF3AP3-201ENST00000420996 ELOBQ15370 118 aa10.99□□□□□ -0.65
UPF3AP3-201ENST00000420996 ATRAIDQ6UW56 229 aa10.99□□□□□ -0.65
UPF3AP3-201ENST00000420996 HSD17B11Q8NBQ5 300 aa10.99□□□□□ -0.65
UPF3AP3-201ENST00000420996 PSMG3Q9BT73 122 aaPredicted RBP10.99□□□□□ -0.65
UPF3AP3-201ENST00000420996 HMCN2Q8NDA2 5059 aa10.98□□□□□ -0.65
UPF3AP3-201ENST00000420996 A0A087WX48 190 aa10.98□□□□□ -0.65
UPF3AP3-201ENST00000420996 TRAV34A0A0B4J273 112 aa10.98□□□□□ -0.65
UPF3AP3-201ENST00000420996 SERF2P84101 59 aa10.98□□□□□ -0.65
UPF3AP3-201ENST00000420996 DNLZQ5SXM8 178 aa10.98□□□□□ -0.65
UPF3AP3-201ENST00000420996 ARL2-SNX15V9GYD0 113 aa10.98□□□□□ -0.65
UPF3AP3-201ENST00000420996 A0A1W2PRE2 83 aa10.97□□□□□ -0.65
UPF3AP3-201ENST00000420996 B4DEV8 164 aa10.97□□□□□ -0.65
UPF3AP3-201ENST00000420996 H3BVH4 76 aa10.97□□□□□ -0.65
UPF3AP3-201ENST00000420996 ATP6V0CP27449 155 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms