RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 LAGE3Q14657 143 aa9.85□□□□□ -0.83
RPS28-201ENST00000417088 OR2G3Q8NGZ4 309 aa9.85□□□□□ -0.83
RPS28-201ENST00000417088 RAB24Q969Q5 203 aa9.85□□□□□ -0.83
RPS28-201ENST00000417088 K7EQM0 130 aa9.84□□□□□ -0.83
RPS28-201ENST00000417088 C1QBP02746 253 aa9.84□□□□□ -0.83
RPS28-201ENST00000417088 GCHFRP30047 84 aa9.84□□□□□ -0.83
RPS28-201ENST00000417088 SUMO1P63165 101 aaKnown RBP9.84□□□□□ -0.83
RPS28-201ENST00000417088 FLI1Q01543 452 aaPredicted RBP9.84□□□□□ -0.83
RPS28-201ENST00000417088 WFDC2Q14508 124 aa9.84□□□□□ -0.83
RPS28-201ENST00000417088 SMUG1Q53HV7 270 aa9.84□□□□□ -0.83
RPS28-201ENST00000417088 Q8N3U1 123 aa9.84□□□□□ -0.83
RPS28-201ENST00000417088 HSD17B11Q8NBQ5 300 aa9.84□□□□□ -0.83
RPS28-201ENST00000417088 EPDR1Q9UM22 224 aa9.84□□□□□ -0.83
RPS28-201ENST00000417088 GGTLC3B5MD39 225 aa9.83□□□□□ -0.84
RPS28-201ENST00000417088 DEFA1P59665 94 aa9.83□□□□□ -0.84
RPS28-201ENST00000417088 DEFA3P59666 94 aa9.83□□□□□ -0.84
RPS28-201ENST00000417088 PRNTQ86SH4 94 aa9.83□□□□□ -0.84
RPS28-201ENST00000417088 TM2D2Q9BX73 214 aa9.83□□□□□ -0.84
RPS28-201ENST00000417088 LINC00694P0DN24 101 aa9.82□□□□□ -0.84
RPS28-201ENST00000417088 ZFP69Q49AA0 526 aa9.82□□□□□ -0.84
RPS28-201ENST00000417088 CYB561D1Q8N8Q1 229 aa9.82□□□□□ -0.84
RPS28-201ENST00000417088 PSMG3Q9BT73 122 aaPredicted RBP9.82□□□□□ -0.84
RPS28-201ENST00000417088 PARLQ9H300 379 aa9.82□□□□□ -0.84
RPS28-201ENST00000417088 IGKV3D-20A0A0C4DH25 116 aa9.81□□□□□ -0.84
RPS28-201ENST00000417088 GAGE12JA6NER3 117 aa9.81□□□□□ -0.84
RPS28-201ENST00000417088 A6NHS1 94 aa9.81□□□□□ -0.84
RPS28-201ENST00000417088 ATP6V0CP27449 155 aa9.81□□□□□ -0.84
RPS28-201ENST00000417088 GAGE1Q13065 139 aa9.81□□□□□ -0.84
RPS28-201ENST00000417088 GAGE4Q13068 117 aa9.81□□□□□ -0.84
RPS28-201ENST00000417088 GAGE5Q13069 117 aa9.81□□□□□ -0.84
RPS28-201ENST00000417088 GAGE13Q4V321 117 aa9.81□□□□□ -0.84
RPS28-201ENST00000417088 SAPCD1Q5SSQ6 148 aa9.81□□□□□ -0.84
RPS28-201ENST00000417088 ZFP2Q6ZN57 461 aa9.81□□□□□ -0.84
RPS28-201ENST00000417088 TMEM167BQ9NRX6 74 aa9.81□□□□□ -0.84
RPS28-201ENST00000417088 Q9UF83 564 aa9.81□□□□□ -0.84
RPS28-201ENST00000417088 A8MWV9 139 aa9.8□□□□□ -0.84
RPS28-201ENST00000417088 LECT2O14960 151 aa9.8□□□□□ -0.84
RPS28-201ENST00000417088 MBP02144 154 aa9.8□□□□□ -0.84
RPS28-201ENST00000417088 PIK3CD-AS1Q5SR53 167 aa9.8□□□□□ -0.84
RPS28-201ENST00000417088 Q6ZSA8 131 aa9.8□□□□□ -0.84
RPS28-201ENST00000417088 DAZ4Q86SG3 579 aaKnown RBP9.8□□□□□ -0.84
RPS28-201ENST00000417088 LINC00479Q96M42 142 aa9.8□□□□□ -0.84
RPS28-201ENST00000417088 JPT2Q9H910 190 aa9.8□□□□□ -0.84
RPS28-201ENST00000417088 DAZ3Q9NR90 486 aaKnown RBP9.8□□□□□ -0.84
RPS28-201ENST00000417088 TRAV8-3A0A0A6YYJ7 113 aa9.79□□□□□ -0.84
RPS28-201ENST00000417088 TRAV34A0A0B4J273 112 aa9.79□□□□□ -0.84
RPS28-201ENST00000417088 CXorf1O96002 111 aa9.79□□□□□ -0.84
RPS28-201ENST00000417088 S100A4P26447 101 aaKnown RBP9.79□□□□□ -0.84
RPS28-201ENST00000417088 SERF2P84101 59 aa9.79□□□□□ -0.84
RPS28-201ENST00000417088 LGALSLQ3ZCW2 172 aaPredicted RBP9.79□□□□□ -0.84
RPS28-201ENST00000417088 UFSP1Q6NVU6 142 aa9.79□□□□□ -0.84
RPS28-201ENST00000417088 OR2T35Q8NGX2 323 aa9.79□□□□□ -0.84
RPS28-201ENST00000417088 AQP10Q96PS8 301 aa9.79□□□□□ -0.84
RPS28-201ENST00000417088 ACTR3CQ9C0K3 210 aaPredicted RBP9.79□□□□□ -0.84
RPS28-201ENST00000417088 SH3BGRL3Q9H299 93 aa9.79□□□□□ -0.84
RPS28-201ENST00000417088 ALG5Q9Y673 324 aa9.79□□□□□ -0.84
RPS28-201ENST00000417088 FABP5P3A8MUU1 101 aa9.78□□□□□ -0.84
RPS28-201ENST00000417088 ASIPP42127 132 aa9.78□□□□□ -0.84
RPS28-201ENST00000417088 C14orf178Q8N769 122 aaPredicted RBP9.78□□□□□ -0.84
RPS28-201ENST00000417088 SAMD10Q9BYL1 202 aa9.78□□□□□ -0.84
RPS28-201ENST00000417088 TNFSF18Q9UNG2 199 aa9.78□□□□□ -0.84
RPS28-201ENST00000417088 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.77□□□□□ -0.85
RPS28-201ENST00000417088 A0A087WWC5 75 aa9.77□□□□□ -0.85
RPS28-201ENST00000417088 A0A1W2PRE2 83 aa9.77□□□□□ -0.85
RPS28-201ENST00000417088 J3QL48 77 aa9.77□□□□□ -0.85
RPS28-201ENST00000417088 PLA2G1BP04054 148 aaKnown RBP9.77□□□□□ -0.85
RPS28-201ENST00000417088 TOR2AQ5JU69 321 aa9.77□□□□□ -0.85
RPS28-201ENST00000417088 DMRTA1Q5VZB9 504 aa9.77□□□□□ -0.85
RPS28-201ENST00000417088 BAALCQ8WXS3 180 aa9.77□□□□□ -0.85
RPS28-201ENST00000417088 IL36BQ9NZH7 164 aa9.77□□□□□ -0.85
RPS28-201ENST00000417088 ARL2-SNX15V9GYD0 113 aa9.77□□□□□ -0.85
RPS28-201ENST00000417088 FGF8P55075 233 aaPredicted RBP9.76□□□□□ -0.85
RPS28-201ENST00000417088 LINC00528Q8N1L1 170 aa9.76□□□□□ -0.85
RPS28-201ENST00000417088 B4DEV8 164 aa9.75□□□□□ -0.85
RPS28-201ENST00000417088 CRIP1P50238 77 aa9.75□□□□□ -0.85
RPS28-201ENST00000417088 ZNF726P1Q15940 193 aa9.75□□□□□ -0.85
RPS28-201ENST00000417088 LINC01620Q4KN68 170 aa9.75□□□□□ -0.85
RPS28-201ENST00000417088 Q5BKY6 102 aa9.75□□□□□ -0.85
RPS28-201ENST00000417088 Q86TA4 180 aa9.75□□□□□ -0.85
RPS28-201ENST00000417088 COX11Q9Y6N1 276 aa9.75□□□□□ -0.85
RPS28-201ENST00000417088 H3BVH4 76 aa9.74□□□□□ -0.85
RPS28-201ENST00000417088 PEX7O00628 323 aa9.74□□□□□ -0.85
RPS28-201ENST00000417088 IFNA7P01567 189 aa9.74□□□□□ -0.85
RPS28-201ENST00000417088 ARMS2P0C7Q2 107 aa9.74□□□□□ -0.85
RPS28-201ENST00000417088 DNLZQ5SXM8 178 aa9.74□□□□□ -0.85
RPS28-201ENST00000417088 NIT1Q86X76 327 aa9.74□□□□□ -0.85
RPS28-201ENST00000417088 DNAJC30Q96LL9 226 aa9.74□□□□□ -0.85
RPS28-201ENST00000417088 GRIFINA4D1Z8 144 aa9.73□□□□□ -0.85
RPS28-201ENST00000417088 KRTAP29-1A8MX34 341 aaPredicted RBP9.73□□□□□ -0.85
RPS28-201ENST00000417088 KRBOX1C9JBD0 128 aa9.73□□□□□ -0.85
RPS28-201ENST00000417088 RHODO00212 210 aa9.73□□□□□ -0.85
RPS28-201ENST00000417088 UBE2G2P60604 165 aa9.73□□□□□ -0.85
RPS28-201ENST00000417088 RPL7L1Q6DKI1 246 aaKnown RBP9.73□□□□□ -0.85
RPS28-201ENST00000417088 SYT8Q8NBV8 401 aa9.73□□□□□ -0.85
RPS28-201ENST00000417088 ZC2HC1AQ96GY0 325 aa9.73□□□□□ -0.85
RPS28-201ENST00000417088 MED28Q9H204 178 aa9.73□□□□□ -0.85
RPS28-201ENST00000417088 CTXND1A0A1B0GTU2 59 aa9.72□□□□□ -0.85
RPS28-201ENST00000417088 RNF222A6NCQ9 220 aa9.72□□□□□ -0.85
RPS28-201ENST00000417088 FAM74A7A6NL05 159 aa9.72□□□□□ -0.85
RPS28-201ENST00000417088 M0R036 132 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms