RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 FAM30AQ9NZY2 134 aa12.89□□□□□ -0.35
HDAC11-205ENST00000404548 IGLV2-11P01706 119 aa12.88□□□□□ -0.35
HDAC11-205ENST00000404548 LINC00694P0DN24 101 aa12.88□□□□□ -0.35
HDAC11-205ENST00000404548 RNASE3P12724 160 aaKnown RBP12.88□□□□□ -0.35
HDAC11-205ENST00000404548 PSG8Q9UQ74 426 aa12.88□□□□□ -0.35
HDAC11-205ENST00000404548 TRAV8-3A0A0A6YYJ7 113 aa12.87□□□□□ -0.35
HDAC11-205ENST00000404548 PGPEP1LA6NFU8 196 aa12.87□□□□□ -0.35
HDAC11-205ENST00000404548 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
HDAC11-205ENST00000404548 FLI1Q01543 452 aaPredicted RBP12.87□□□□□ -0.35
HDAC11-205ENST00000404548 SMUG1Q53HV7 270 aa12.87□□□□□ -0.35
HDAC11-205ENST00000404548 TMEM75Q8N9X5 138 aa12.87□□□□□ -0.35
HDAC11-205ENST00000404548 SGK494Q96LW2 274 aa12.87□□□□□ -0.35
HDAC11-205ENST00000404548 PSMG3Q9BT73 122 aaPredicted RBP12.87□□□□□ -0.35
HDAC11-205ENST00000404548 IGHV3-73A0A0B4J1V6 119 aa12.86□□□□□ -0.35
HDAC11-205ENST00000404548 A8MWV9 139 aa12.86□□□□□ -0.35
HDAC11-205ENST00000404548 GCHFRP30047 84 aa12.86□□□□□ -0.35
HDAC11-205ENST00000404548 TOR2AQ5JU69 321 aa12.86□□□□□ -0.35
HDAC11-205ENST00000404548 SAPCD1Q5SSQ6 148 aa12.86□□□□□ -0.35
HDAC11-205ENST00000404548 CYB561D1Q8N8Q1 229 aa12.86□□□□□ -0.35
HDAC11-205ENST00000404548 A0A087WWC5 75 aa12.85□□□□□ -0.35
HDAC11-205ENST00000404548 MBP02144 154 aa12.85□□□□□ -0.35
HDAC11-205ENST00000404548 PLA2G1BP04054 148 aaKnown RBP12.85□□□□□ -0.35
HDAC11-205ENST00000404548 DEFA1P59665 94 aa12.85□□□□□ -0.35
HDAC11-205ENST00000404548 DEFA3P59666 94 aa12.85□□□□□ -0.35
HDAC11-205ENST00000404548 RAB24Q969Q5 203 aa12.85□□□□□ -0.35
HDAC11-205ENST00000404548 PARLQ9H300 379 aa12.85□□□□□ -0.35
HDAC11-205ENST00000404548 TMEM167BQ9NRX6 74 aa12.85□□□□□ -0.35
HDAC11-205ENST00000404548 EPDR1Q9UM22 224 aa12.85□□□□□ -0.35
HDAC11-205ENST00000404548 COX11Q9Y6N1 276 aa12.85□□□□□ -0.35
HDAC11-205ENST00000404548 GGTLC3B5MD39 225 aa12.84□□□□□ -0.35
HDAC11-205ENST00000404548 SERF2P84101 59 aa12.84□□□□□ -0.35
HDAC11-205ENST00000404548 WFDC2Q14508 124 aa12.83□□□□□ -0.36
HDAC11-205ENST00000404548 LINC00479Q96M42 142 aa12.83□□□□□ -0.36
HDAC11-205ENST00000404548 J3QL48 77 aa12.82□□□□□ -0.36
HDAC11-205ENST00000404548 CXorf1O96002 111 aa12.82□□□□□ -0.36
HDAC11-205ENST00000404548 FGF8P55075 233 aaPredicted RBP12.82□□□□□ -0.36
HDAC11-205ENST00000404548 SUMO1P63165 101 aaKnown RBP12.82□□□□□ -0.36
HDAC11-205ENST00000404548 UFSP1Q6NVU6 142 aa12.82□□□□□ -0.36
HDAC11-205ENST00000404548 PRNTQ86SH4 94 aa12.82□□□□□ -0.36
HDAC11-205ENST00000404548 IGKV3D-20A0A0C4DH25 116 aa12.81□□□□□ -0.36
HDAC11-205ENST00000404548 A0A1W2PRE2 83 aa12.81□□□□□ -0.36
HDAC11-205ENST00000404548 KRTAP29-1A8MX34 341 aaPredicted RBP12.81□□□□□ -0.36
HDAC11-205ENST00000404548 Q8N3U1 123 aa12.81□□□□□ -0.36
HDAC11-205ENST00000404548 HSD17B11Q8NBQ5 300 aa12.81□□□□□ -0.36
HDAC11-205ENST00000404548 AQP10Q96PS8 301 aa12.81□□□□□ -0.36
HDAC11-205ENST00000404548 IL36BQ9NZH7 164 aa12.81□□□□□ -0.36
HDAC11-205ENST00000404548 GAGE12JA6NER3 117 aa12.8□□□□□ -0.36
HDAC11-205ENST00000404548 SEC11BP0C7V7 166 aa12.8□□□□□ -0.36
HDAC11-205ENST00000404548 S100A4P26447 101 aaKnown RBP12.8□□□□□ -0.36
HDAC11-205ENST00000404548 ATP6V0CP27449 155 aa12.8□□□□□ -0.36
HDAC11-205ENST00000404548 ASIPP42127 132 aa12.8□□□□□ -0.36
HDAC11-205ENST00000404548 GAGE1Q13065 139 aa12.8□□□□□ -0.36
HDAC11-205ENST00000404548 GAGE4Q13068 117 aa12.8□□□□□ -0.36
HDAC11-205ENST00000404548 GAGE5Q13069 117 aa12.8□□□□□ -0.36
HDAC11-205ENST00000404548 GAGE13Q4V321 117 aa12.8□□□□□ -0.36
HDAC11-205ENST00000404548 LINC00528Q8N1L1 170 aa12.8□□□□□ -0.36
HDAC11-205ENST00000404548 TNFSF18Q9UNG2 199 aa12.8□□□□□ -0.36
HDAC11-205ENST00000404548 RHODO00212 210 aa12.79□□□□□ -0.36
HDAC11-205ENST00000404548 DNLZQ5SXM8 178 aa12.79□□□□□ -0.36
HDAC11-205ENST00000404548 DAZ4Q86SG3 579 aaKnown RBP12.79□□□□□ -0.36
HDAC11-205ENST00000404548 DEFB104AQ8WTQ1 72 aa12.79□□□□□ -0.36
HDAC11-205ENST00000404548 RMI2Q96E14 147 aa12.79□□□□□ -0.36
HDAC11-205ENST00000404548 ACTR3CQ9C0K3 210 aaPredicted RBP12.79□□□□□ -0.36
HDAC11-205ENST00000404548 DAZ3Q9NR90 486 aaKnown RBP12.79□□□□□ -0.36
HDAC11-205ENST00000404548 FABP5P3A8MUU1 101 aa12.78□□□□□ -0.36
HDAC11-205ENST00000404548 LGALSLQ3ZCW2 172 aaPredicted RBP12.78□□□□□ -0.36
HDAC11-205ENST00000404548 Q8N976 141 aa12.77□□□□□ -0.37
HDAC11-205ENST00000404548 CHCHD7Q9BUK0 85 aa12.77□□□□□ -0.37
HDAC11-205ENST00000404548 ARL2-SNX15V9GYD0 113 aa12.77□□□□□ -0.37
HDAC11-205ENST00000404548 LECT2O14960 151 aa12.76□□□□□ -0.37
HDAC11-205ENST00000404548 COX8CQ7Z4L0 72 aa12.76□□□□□ -0.37
HDAC11-205ENST00000404548 NIT1Q86X76 327 aa12.76□□□□□ -0.37
HDAC11-205ENST00000404548 SYT8Q8NBV8 401 aa12.76□□□□□ -0.37
HDAC11-205ENST00000404548 OR2T35Q8NGX2 323 aa12.76□□□□□ -0.37
HDAC11-205ENST00000404548 LRP1Q07954 4544 aaKnown RBP12.75□□□□□ -0.37
HDAC11-205ENST00000404548 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.75□□□□□ -0.37
HDAC11-205ENST00000404548 Q86TA4 180 aa12.75□□□□□ -0.37
HDAC11-205ENST00000404548 C14orf178Q8N769 122 aaPredicted RBP12.75□□□□□ -0.37
HDAC11-205ENST00000404548 SAMD10Q9BYL1 202 aa12.75□□□□□ -0.37
HDAC11-205ENST00000404548 NKX6-2Q9C056 277 aaPredicted RBP12.75□□□□□ -0.37
HDAC11-205ENST00000404548 Q9UF83 564 aa12.75□□□□□ -0.37
HDAC11-205ENST00000404548 URGCP-MRPS24S4R325 110 aa12.75□□□□□ -0.37
HDAC11-205ENST00000404548 HMCN2Q8NDA2 5059 aa12.75□□□□□ -0.37
HDAC11-205ENST00000404548 RNF222A6NCQ9 220 aa12.74□□□□□ -0.37
HDAC11-205ENST00000404548 A6NHS1 94 aa12.74□□□□□ -0.37
HDAC11-205ENST00000404548 B4DEV8 164 aa12.74□□□□□ -0.37
HDAC11-205ENST00000404548 DMRTA1Q5VZB9 504 aa12.74□□□□□ -0.37
HDAC11-205ENST00000404548 SCXQ7RTU7 201 aa12.74□□□□□ -0.37
HDAC11-205ENST00000404548 BAALCQ8WXS3 180 aa12.74□□□□□ -0.37
HDAC11-205ENST00000404548 HIST1H2BAQ96A08 127 aa12.74□□□□□ -0.37
HDAC11-205ENST00000404548 JPT2Q9H910 190 aa12.74□□□□□ -0.37
HDAC11-205ENST00000404548 TRAV34A0A0B4J273 112 aa12.73□□□□□ -0.37
HDAC11-205ENST00000404548 H3BVH4 76 aa12.73□□□□□ -0.37
HDAC11-205ENST00000404548 PEX7O00628 323 aa12.73□□□□□ -0.37
HDAC11-205ENST00000404548 ELOBQ15370 118 aa12.73□□□□□ -0.37
HDAC11-205ENST00000404548 ATRAIDQ6UW56 229 aa12.73□□□□□ -0.37
HDAC11-205ENST00000404548 ALG5Q9Y673 324 aa12.73□□□□□ -0.37
HDAC11-205ENST00000404548 TRBV10-1A0A0K0K1A3 114 aa12.72□□□□□ -0.37
HDAC11-205ENST00000404548 KRBOX1C9JBD0 128 aa12.72□□□□□ -0.37
HDAC11-205ENST00000404548 IFNA7P01567 189 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms