RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 M0R2P5 195 aa23.7■■□□□ 1.38
CSNK1E-204ENST00000403904 RNF212Q495C1 297 aa23.7■■□□□ 1.38
CSNK1E-204ENST00000403904 GAGE12BA1L429 117 aa23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 GAGE7O76087 117 aa23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 IGLC6P0CF74 106 aa23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 GAGE12FP0CL80 117 aa23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 GAGE12GP0CL81 117 aa23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 GAGE12IP0CL82 117 aa23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 FER1L6-AS1Q8NA97 138 aa23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 TEX48A0A1B0GUV7 120 aa23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 APOC3P02656 99 aa23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 MED14OSP0DP75 135 aa23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 NANOS2P60321 138 aaKnown RBP23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 LGALS9BQ3B8N2 356 aa23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 GTSF1Q8WW33 167 aa23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 SSBP4Q9BWG4 385 aaPredicted RBP23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 PHLDA3Q9Y5J5 127 aa23.69■■□□□ 1.38
CSNK1E-204ENST00000403904 MUC21A0A0G2JKD1 596 aa23.68■■□□□ 1.38
CSNK1E-204ENST00000403904 MUC21A0A140T8X8 626 aa23.68■■□□□ 1.38
CSNK1E-204ENST00000403904 ZNF876PQ49A33 203 aa23.68■■□□□ 1.38
CSNK1E-204ENST00000403904 SNAI2O43623 268 aa23.67■■□□□ 1.38
CSNK1E-204ENST00000403904 OR5AL1P0C617 328 aa23.67■■□□□ 1.38
CSNK1E-204ENST00000403904 C12orf74Q32Q52 190 aa23.67■■□□□ 1.38
CSNK1E-204ENST00000403904 TSKUQ8WUA8 353 aa23.67■■□□□ 1.38
CSNK1E-204ENST00000403904 MT-ND4LP03901 98 aa23.66■■□□□ 1.38
CSNK1E-204ENST00000403904 DAD1P61803 113 aa23.66■■□□□ 1.38
CSNK1E-204ENST00000403904 LINC00612Q8N6U2 182 aa23.66■■□□□ 1.38
CSNK1E-204ENST00000403904 OR10AG1Q8NH19 301 aa23.66■■□□□ 1.38
CSNK1E-204ENST00000403904 RASL10AQ92737 203 aa23.66■■□□□ 1.38
CSNK1E-204ENST00000403904 SSTP61278 116 aa23.65■■□□□ 1.38
CSNK1E-204ENST00000403904 A0A1W2PPQ1 181 aa23.65■■□□□ 1.38
CSNK1E-204ENST00000403904 DMRTA1Q5VZB9 504 aa23.65■■□□□ 1.38
CSNK1E-204ENST00000403904 LYZL1Q6UWQ5 148 aa23.65■■□□□ 1.38
CSNK1E-204ENST00000403904 M0R381 172 aa23.64■■□□□ 1.37
CSNK1E-204ENST00000403904 PPP1R2P9O14990 202 aa23.64■■□□□ 1.37
CSNK1E-204ENST00000403904 CLRN3Q8NCR9 226 aa23.63■■□□□ 1.37
CSNK1E-204ENST00000403904 ANAPC16Q96DE5 110 aa23.63■■□□□ 1.37
CSNK1E-204ENST00000403904 TRGV2A0A075B6R0 118 aa23.62■■□□□ 1.37
CSNK1E-204ENST00000403904 GFRA4Q9GZZ7 299 aa23.62■■□□□ 1.37
CSNK1E-204ENST00000403904 DNAH7Q8WXX0 4024 aa23.61■■□□□ 1.37
CSNK1E-204ENST00000403904 F2Z2F3 143 aa23.61■■□□□ 1.37
CSNK1E-204ENST00000403904 Q6ZTC4 211 aa23.61■■□□□ 1.37
CSNK1E-204ENST00000403904 PTH2Q96A98 100 aa23.61■■□□□ 1.37
CSNK1E-204ENST00000403904 HIGD1CA8MV81 97 aa23.61■■□□□ 1.37
CSNK1E-204ENST00000403904 SPANXN1Q5VSR9 72 aa23.61■■□□□ 1.37
CSNK1E-204ENST00000403904 ZFP82Q8N141 532 aa23.61■■□□□ 1.37
CSNK1E-204ENST00000403904 PGLYRP4Q96LB8 373 aa23.61■■□□□ 1.37
CSNK1E-204ENST00000403904 CTRLP40313 264 aa23.6■■□□□ 1.37
CSNK1E-204ENST00000403904 FOXA3P55318 350 aaPredicted RBP23.6■■□□□ 1.37
CSNK1E-204ENST00000403904 SVBPQ8N300 66 aa23.6■■□□□ 1.37
CSNK1E-204ENST00000403904 SYT8Q8NBV8 401 aa23.6■■□□□ 1.37
CSNK1E-204ENST00000403904 FAM231BA6NCW3 169 aa23.59■■□□□ 1.37
CSNK1E-204ENST00000403904 SMIM27A0A1W2PRY6 76 aa23.58■■□□□ 1.37
CSNK1E-204ENST00000403904 C7orf77A4D0Y5 90 aa23.58■■□□□ 1.37
CSNK1E-204ENST00000403904 JPT2Q9H910 190 aa23.57■■□□□ 1.36
CSNK1E-204ENST00000403904 NXPH4O95158 308 aa23.56■■□□□ 1.36
CSNK1E-204ENST00000403904 RHEBQ15382 184 aa23.56■■□□□ 1.36
CSNK1E-204ENST00000403904 PIK3CD-AS1Q5SR53 167 aa23.56■■□□□ 1.36
CSNK1E-204ENST00000403904 POM121L12Q8N7R1 296 aa23.56■■□□□ 1.36
CSNK1E-204ENST00000403904 NUP35Q8NFH5 326 aa23.56■■□□□ 1.36
CSNK1E-204ENST00000403904 C18orf15Q96N68 181 aa23.56■■□□□ 1.36
CSNK1E-204ENST00000403904 NAT8BQ9UHF3 227 aa23.56■■□□□ 1.36
CSNK1E-204ENST00000403904 SNAPINO95295 136 aa23.55■■□□□ 1.36
CSNK1E-204ENST00000403904 IGHV3-53P01767 116 aa23.55■■□□□ 1.36
CSNK1E-204ENST00000403904 NDUFAF3Q9BU61 184 aa23.55■■□□□ 1.36
CSNK1E-204ENST00000403904 MSRB1Q9NZV6 116 aa23.55■■□□□ 1.36
CSNK1E-204ENST00000403904 NACAE9PAV3 2078 aa23.55■■□□□ 1.36
CSNK1E-204ENST00000403904 CACNG7P62955 275 aa23.54■■□□□ 1.36
CSNK1E-204ENST00000403904 WWC2-AS2Q96NR7 200 aa23.54■■□□□ 1.36
CSNK1E-204ENST00000403904 CTDSP1Q9GZU7 261 aa23.54■■□□□ 1.36
CSNK1E-204ENST00000403904 RPS10P5Q9NQ39 176 aa23.54■■□□□ 1.36
CSNK1E-204ENST00000403904 HTN3P15516 51 aa23.53■■□□□ 1.36
CSNK1E-204ENST00000403904 NTF3P20783 257 aa23.53■■□□□ 1.36
CSNK1E-204ENST00000403904 CNFNQ9BYD5 112 aa23.53■■□□□ 1.36
CSNK1E-204ENST00000403904 ATP5G1P05496 136 aa23.52■■□□□ 1.36
CSNK1E-204ENST00000403904 CFAP126Q5VTH2 177 aa23.52■■□□□ 1.36
CSNK1E-204ENST00000403904 OR4C5Q8NGB2 326 aa23.52■■□□□ 1.36
CSNK1E-204ENST00000403904 IGHV4-4A0A075B6R2 117 aa23.52■■□□□ 1.36
CSNK1E-204ENST00000403904 ZNF479Q96JC4 524 aa23.52■■□□□ 1.36
CSNK1E-204ENST00000403904 TRAV4A0A0B4J268 109 aa23.51■■□□□ 1.35
CSNK1E-204ENST00000403904 RS1O15537 224 aa23.51■■□□□ 1.35
CSNK1E-204ENST00000403904 WDR73Q6P4I2 378 aa23.51■■□□□ 1.35
CSNK1E-204ENST00000403904 A8MWV9 139 aa23.5■■□□□ 1.35
CSNK1E-204ENST00000403904 TWIST1Q15672 202 aa23.5■■□□□ 1.35
CSNK1E-204ENST00000403904 BORCS7Q96B45 105 aa23.5■■□□□ 1.35
CSNK1E-204ENST00000403904 SAMD10Q9BYL1 202 aa23.5■■□□□ 1.35
CSNK1E-204ENST00000403904 A0A087WWC5 75 aa23.49■■□□□ 1.35
CSNK1E-204ENST00000403904 FAM3BP58499 235 aaPredicted RBP23.49■■□□□ 1.35
CSNK1E-204ENST00000403904 A0A1B0GUT8 65 aa23.48■■□□□ 1.35
CSNK1E-204ENST00000403904 PHLDA1Q8WV24 401 aaPredicted RBP23.48■■□□□ 1.35
CSNK1E-204ENST00000403904 DEFB131BA0A096LNP1 70 aa23.48■■□□□ 1.35
CSNK1E-204ENST00000403904 HOXA5P20719 270 aa23.48■■□□□ 1.35
CSNK1E-204ENST00000403904 TMEM242Q9NWH2 141 aa23.48■■□□□ 1.35
CSNK1E-204ENST00000403904 CSMD3Q7Z407 3707 aa23.47■■□□□ 1.35
CSNK1E-204ENST00000403904 A0A087WWL8 130 aa23.47■■□□□ 1.35
CSNK1E-204ENST00000403904 IGHV3-73A0A0B4J1V6 119 aa23.47■■□□□ 1.35
CSNK1E-204ENST00000403904 TRAV10A0A0B4J240 114 aa23.47■■□□□ 1.35
CSNK1E-204ENST00000403904 ATRAIDQ6UW56 229 aa23.47■■□□□ 1.35
CSNK1E-204ENST00000403904 F5H768 121 aa23.46■■□□□ 1.35
CSNK1E-204ENST00000403904 FAM74A4Q5TZK3 123 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms