RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 BUB1B-PAK6H3BSN5 160 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 DUX4L9Q6RFH8 374 aaPredicted RBP4.26□□□□□ -1.73
PTPRD-205ENST00000397611 Q6ZUT4 128 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 DUX3Q96PT4 197 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 SNRPD3P62318 126 aaKnown RBP4.26□□□□□ -1.73
PTPRD-205ENST00000397611 ZNF876PQ49A33 203 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 DSCAML1Q8TD84 2053 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 IGHV4-4A0A075B6R2 117 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 OVOL3O00110 214 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 CFC1BP0CG36 223 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 CFC1P0CG37 223 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 TEN1Q86WV5 123 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 C17orf77Q96MU5 243 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 IGLV11-55A0A075B6I3 123 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 WI2-2373I1.2A0A1W2PRP0 233 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 CRPP02741 224 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 HLA-DMBP28068 263 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 J3KT08 172 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 COL8A2P25067 703 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 LYNX1G3V0Z9 82 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 VCYO14598 125 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 LYNX1P0DP58 116 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 PRR25Q96S07 402 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 CITED2Q99967 270 aaPredicted RBP4.26□□□□□ -1.73
PTPRD-205ENST00000397611 TPSG1Q9NRR2 321 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 ADARB2-AS1A8MUL3 147 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 CFHR4Q92496 578 aa4.26□□□□□ -1.73
PTPRD-205ENST00000397611 TRIOO75962 3097 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 F8VRH5 84 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 RPL32P62910 135 aaKnown RBP4.25□□□□□ -1.73
PTPRD-205ENST00000397611 BSPH1Q075Z2 132 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 LOXL1Q08397 574 aaPredicted RBP4.25□□□□□ -1.73
PTPRD-205ENST00000397611 LINC00158P58513 81 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 FAM236AA0A1B0GUQ0 79 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 FAM236BA0A1B0GV22 79 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 LINC01546A6NGU7 62 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 UTF1Q5T230 341 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 PIMREGQ9BSJ6 248 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 ZNF580Q9UK33 172 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 MORN3Q6PF18 240 aaPredicted RBP4.25□□□□□ -1.73
PTPRD-205ENST00000397611 Q8N6K4 173 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 OVOL1O14753 267 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 LINC00527Q9UJ94 153 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 PKD1L2Q7Z442 2459 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 ATP6V0E2Q8NHE4 81 aa4.25□□□□□ -1.73
PTPRD-205ENST00000397611 ODF3BA8MYP8 253 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 E7EUB6 86 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 J3QQQ9 107 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 TMEM141Q96I45 108 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 ZFYVE26Q68DK2 2539 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 SMIM2Q9BVW6 85 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 ARHGAP21Q5T5U3 1957 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 C15orf32Q32M92 178 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 CHCHD5Q9BSY4 110 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 MSRB1Q9NZV6 116 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 DIAPH2-AS1Q14236 149 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.24□□□□□ -1.73
PTPRD-205ENST00000397611 MED14OSP0DP75 135 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 FANCD2OSQ96PS1 177 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 IGHG4P01861 327 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 LINC00322Q6ZN03 302 aaPredicted RBP4.24□□□□□ -1.73
PTPRD-205ENST00000397611 TRPT1Q86TN4 253 aaKnown RBP4.24□□□□□ -1.73
PTPRD-205ENST00000397611 LINC01560Q8TB33 94 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 C1orf43Q9BWL3 253 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 SPRY2O43597 315 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 NDUFV3P56181 108 aaKnown RBP4.24□□□□□ -1.73
PTPRD-205ENST00000397611 C9orf139Q6ZV77 190 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 KLHL30-AS1Q8NEE0 82 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 LINC01587Q99440 93 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 MSRB2Q9Y3D2 182 aa4.24□□□□□ -1.73
PTPRD-205ENST00000397611 FAM110DQ8TAY7 271 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-205ENST00000397611 LEPROTO15243 131 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 INAFM2P0DMQ5 153 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 CRIP2P52943 208 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-205ENST00000397611 SYNJ2BPP57105 145 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 TM2D2Q9BX73 214 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 DYSFO75923 2080 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 TLN2Q9Y4G6 2542 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 EGR2P11161 476 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-205ENST00000397611 DSCR9P59020 149 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 LINC01620Q4KN68 170 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 ZMAT4Q9H898 229 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 A0A0G2JNJ9 132 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 PAX4O43316 350 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 S100A7L2Q5SY68 101 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 UFSP1Q6NVU6 142 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 LYPD2Q6UXB3 125 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 RASL10AQ92737 203 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 Q9UFV3 132 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 PAX8Q06710 450 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 LINC00477Q96M19 166 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 NDUFA12Q9UI09 145 aa4.23□□□□□ -1.73
PTPRD-205ENST00000397611 A0A096LNJ9 63 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 E7EQL1 145 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 SPATA25Q9BR10 227 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 RBMY1FQ15415 496 aaKnown RBP4.22□□□□□ -1.73
PTPRD-205ENST00000397611 PTPRBP23467 1997 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 LAMA2P24043 3122 aaKnown RBP4.22□□□□□ -1.73
PTPRD-205ENST00000397611 TRGV11A0A075B6L2 103 aa4.22□□□□□ -1.73
PTPRD-205ENST00000397611 SOCS3O14543 225 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms