RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 CFHR3Q02985 330 aa17.95■□□□□ 0.46
PABPN1-202ENST00000397276 CHAC1Q9BUX1 264 aa17.95■□□□□ 0.46
PABPN1-202ENST00000397276 DSCR9P59020 149 aa17.95■□□□□ 0.46
PABPN1-202ENST00000397276 NHP2Q9NX24 153 aaKnown RBP17.95■□□□□ 0.46
PABPN1-202ENST00000397276 OVOL1O14753 267 aa17.94■□□□□ 0.46
PABPN1-202ENST00000397276 FOXC2Q99958 501 aa17.94■□□□□ 0.46
PABPN1-202ENST00000397276 RNF223E7ERA6 249 aa17.94■□□□□ 0.46
PABPN1-202ENST00000397276 BRI3O95415 125 aa17.94■□□□□ 0.46
PABPN1-202ENST00000397276 SLC25A16P16260 332 aa17.94■□□□□ 0.46
PABPN1-202ENST00000397276 S100A4P26447 101 aaKnown RBP17.94■□□□□ 0.46
PABPN1-202ENST00000397276 TRBV25-1A0A075B6N4 114 aa17.93■□□□□ 0.46
PABPN1-202ENST00000397276 COX6B1P14854 86 aa17.93■□□□□ 0.46
PABPN1-202ENST00000397276 GATA3P23771 443 aa17.93■□□□□ 0.46
PABPN1-202ENST00000397276 SMPXQ9UHP9 88 aa17.92■□□□□ 0.46
PABPN1-202ENST00000397276 PTPN13Q12923 2485 aa17.92■□□□□ 0.46
PABPN1-202ENST00000397276 ANXA2RQ3ZCQ2 193 aa17.92■□□□□ 0.46
PABPN1-202ENST00000397276 ZC2HC1BQ5TFG8 222 aa17.92■□□□□ 0.46
PABPN1-202ENST00000397276 PHLDA1Q8WV24 401 aaPredicted RBP17.92■□□□□ 0.46
PABPN1-202ENST00000397276 TMEM158Q8WZ71 300 aa17.92■□□□□ 0.46
PABPN1-202ENST00000397276 TRAV21A0A0B4J279 112 aa17.91■□□□□ 0.46
PABPN1-202ENST00000397276 ZMAT4Q9H898 229 aa17.91■□□□□ 0.46
PABPN1-202ENST00000397276 GNRH2O43555 120 aa17.91■□□□□ 0.46
PABPN1-202ENST00000397276 KRTAP10-9P60411 292 aa17.91■□□□□ 0.46
PABPN1-202ENST00000397276 MAPKAPK5-AS1Q8N8E1 139 aa17.91■□□□□ 0.46
PABPN1-202ENST00000397276 GTSF1LQ9H1H1 148 aa17.91■□□□□ 0.46
PABPN1-202ENST00000397276 NXT2Q9NPJ8 142 aaKnown RBP17.91■□□□□ 0.46
PABPN1-202ENST00000397276 TMEM160Q9NX00 188 aa17.91■□□□□ 0.46
PABPN1-202ENST00000397276 LENEPQ9Y5L5 61 aa17.91■□□□□ 0.46
PABPN1-202ENST00000397276 ABCA12Q86UK0 2595 aa17.91■□□□□ 0.46
PABPN1-202ENST00000397276 PSMB8P28062 276 aa17.91■□□□□ 0.46
PABPN1-202ENST00000397276 FCER1GP30273 86 aa17.91■□□□□ 0.46
PABPN1-202ENST00000397276 MTURNQ8N3F0 131 aa17.91■□□□□ 0.46
PABPN1-202ENST00000397276 IGKCP01834 107 aa17.9■□□□□ 0.46
PABPN1-202ENST00000397276 SRSF1Q07955 248 aaKnown RBP eCLIP17.9■□□□□ 0.464e-11■□□□□ 10.8
PABPN1-202ENST00000397276 A0A096LNT2 108 aa17.89■□□□□ 0.45
PABPN1-202ENST00000397276 WFDC2Q14508 124 aa17.89■□□□□ 0.45
PABPN1-202ENST00000397276 MXRA5Q9NR99 2828 aa17.89■□□□□ 0.45
PABPN1-202ENST00000397276 NRACQ8N912 160 aa17.88■□□□□ 0.45
PABPN1-202ENST00000397276 PHLDA3Q9Y5J5 127 aa17.88■□□□□ 0.45
PABPN1-202ENST00000397276 C14orf178Q8N769 122 aaPredicted RBP17.87■□□□□ 0.45
PABPN1-202ENST00000397276 DUX5Q96PT3 197 aa17.87■□□□□ 0.45
PABPN1-202ENST00000397276 Q8N8P6 123 aa17.87■□□□□ 0.45
PABPN1-202ENST00000397276 ASIPP42127 132 aa17.86■□□□□ 0.45
PABPN1-202ENST00000397276 SAMD13Q5VXD3 122 aa17.86■□□□□ 0.45
PABPN1-202ENST00000397276 AMTNQ6UX39 209 aa17.86■□□□□ 0.45
PABPN1-202ENST00000397276 MRPL35Q9NZE8 188 aaKnown RBP17.86■□□□□ 0.45
PABPN1-202ENST00000397276 IGLV2-18A0A075B6J9 118 aa17.86■□□□□ 0.45
PABPN1-202ENST00000397276 CEND1Q8N111 149 aa17.86■□□□□ 0.45
PABPN1-202ENST00000397276 IGKV3-20P01619 116 aa17.85■□□□□ 0.45
PABPN1-202ENST00000397276 AZU1P20160 251 aa17.85■□□□□ 0.45
PABPN1-202ENST00000397276 SMAGPQ0VAQ4 97 aa17.85■□□□□ 0.45
PABPN1-202ENST00000397276 SH2D6Q7Z4S9 175 aa17.85■□□□□ 0.45
PABPN1-202ENST00000397276 HIGD1BQ9P298 99 aa17.85■□□□□ 0.45
PABPN1-202ENST00000397276 IGHV4-4A0A075B6R2 117 aa17.85■□□□□ 0.45
PABPN1-202ENST00000397276 BEX4Q9NWD9 120 aaPredicted RBP17.85■□□□□ 0.45
PABPN1-202ENST00000397276 SMIM17P0DL12 118 aa17.85■□□□□ 0.45
PABPN1-202ENST00000397276 H3BMG7 143 aa17.84■□□□□ 0.45
PABPN1-202ENST00000397276 ZNF688P0C7X2 276 aa17.84■□□□□ 0.45
PABPN1-202ENST00000397276 DCANP1Q8TF63 244 aa17.84■□□□□ 0.45
PABPN1-202ENST00000397276 NAV2Q8IVL1 2488 aa17.84■□□□□ 0.45
PABPN1-202ENST00000397276 DPM2O94777 84 aa17.84■□□□□ 0.45
PABPN1-202ENST00000397276 FAM19A4Q96LR4 140 aa17.84■□□□□ 0.45
PABPN1-202ENST00000397276 MGPP08493 103 aa17.83■□□□□ 0.45
PABPN1-202ENST00000397276 ZNF843Q8N446 348 aa17.83■□□□□ 0.45
PABPN1-202ENST00000397276 TSSC4Q9Y5U2 329 aaPredicted RBP17.83■□□□□ 0.45
PABPN1-202ENST00000397276 LINC01546A6NGU7 62 aa17.83■□□□□ 0.44
PABPN1-202ENST00000397276 ZNF469Q96JG9 3925 aaPredicted RBP17.83■□□□□ 0.44
PABPN1-202ENST00000397276 IGLL5B9A064 214 aa17.82■□□□□ 0.44
PABPN1-202ENST00000397276 SYNJ2BPP57105 145 aa17.82■□□□□ 0.44
PABPN1-202ENST00000397276 K7EMT4 169 aa17.82■□□□□ 0.44
PABPN1-202ENST00000397276 TM2D2Q9BX73 214 aa17.82■□□□□ 0.44
PABPN1-202ENST00000397276 TEX15Q9BXT5 2789 aa17.82■□□□□ 0.44
PABPN1-202ENST00000397276 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.81■□□□□ 0.44
PABPN1-202ENST00000397276 LAGE3Q14657 143 aa17.81■□□□□ 0.44
PABPN1-202ENST00000397276 PSMG4Q5JS54 123 aa17.81■□□□□ 0.44
PABPN1-202ENST00000397276 RPL39LQ96EH5 51 aaKnown RBP17.81■□□□□ 0.44
PABPN1-202ENST00000397276 RNASE3P12724 160 aaKnown RBP17.81■□□□□ 0.44
PABPN1-202ENST00000397276 ID1P41134 155 aa17.81■□□□□ 0.44
PABPN1-202ENST00000397276 UBR5O95071 2799 aaPredicted RBP17.81■□□□□ 0.44
PABPN1-202ENST00000397276 ETDBQ3ZM63 59 aa17.8■□□□□ 0.44
PABPN1-202ENST00000397276 EPG5Q9HCE0 2579 aa17.8■□□□□ 0.44
PABPN1-202ENST00000397276 TRAV12-3A0A0B4J271 114 aa17.8■□□□□ 0.44
PABPN1-202ENST00000397276 E9PLD3 99 aa17.8■□□□□ 0.44
PABPN1-202ENST00000397276 HOXA3O43365 443 aaPredicted RBP17.8■□□□□ 0.44
PABPN1-202ENST00000397276 J3QLI3 93 aa17.79■□□□□ 0.44
PABPN1-202ENST00000397276 IGHV4-31P0DP07 118 aa17.79■□□□□ 0.44
PABPN1-202ENST00000397276 SPANXB1Q9NS25 103 aaPredicted RBP17.79■□□□□ 0.44
PABPN1-202ENST00000397276 VPREB3Q9UKI3 123 aa17.79■□□□□ 0.44
PABPN1-202ENST00000397276 SORL1Q92673 2214 aa17.79■□□□□ 0.44
PABPN1-202ENST00000397276 DEFB104AQ8WTQ1 72 aa17.79■□□□□ 0.44
PABPN1-202ENST00000397276 FOXI2Q6ZQN5 318 aa17.79■□□□□ 0.44
PABPN1-202ENST00000397276 ZNF479Q96JC4 524 aa17.79■□□□□ 0.44
PABPN1-202ENST00000397276 NBPF19A0A087WUL8 3843 aa17.78■□□□□ 0.44
PABPN1-202ENST00000397276 INSL3P51460 131 aa17.78■□□□□ 0.44
PABPN1-202ENST00000397276 C12orf74Q32Q52 190 aa17.78■□□□□ 0.44
PABPN1-202ENST00000397276 CREBBPQ92793 2442 aa17.78■□□□□ 0.44
PABPN1-202ENST00000397276 TRAV12-2A0A075B6T6 113 aa17.78■□□□□ 0.44
PABPN1-202ENST00000397276 FAM159AQ6UWV7 190 aa17.78■□□□□ 0.44
PABPN1-202ENST00000397276 RASL10AQ92737 203 aa17.78■□□□□ 0.44
PABPN1-202ENST00000397276 DPH3P1Q9H4G8 78 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms