RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 A0A087WW49 117 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 CYYR1Q96J86 154 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 SPANXDQ9BXN6 97 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 UBR3Q6ZT12 1888 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 SPRY2O43597 315 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 Q0VG73 95 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 FAM231DQ6ZW35 169 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 LY6G6EA0A0G2JKS1 128 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 ETV2O00321 342 aaPredicted RBP5.62□□□□□ -1.51
UPF2-203ENST00000397053 UBE2V1Q13404 147 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 LGALS9BQ3B8N2 356 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 LGALS9CQ6DKI2 356 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 KIR2DL5BQ8NHK3 375 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 U3KQA8 63 aa5.62□□□□□ -1.51
UPF2-203ENST00000397053 A0A096LNI7 61 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 H0YGX0 51 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 CASC2Q6XLA1 102 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 IGFBPL1Q8WX77 278 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 PRO0255Q9UI72 69 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 RGPD3A6NKT7 1758 aaPredicted RBP5.61□□□□□ -1.51
UPF2-203ENST00000397053 C2orf70A6NJV1 201 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 C15orf65H3BRN8 121 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 MRPL52Q86TS9 123 aaKnown RBP5.61□□□□□ -1.51
UPF2-203ENST00000397053 IGHV7-81A0A0B4J1V7 117 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 WT1P19544 449 aaPredicted RBP5.61□□□□□ -1.51
UPF2-203ENST00000397053 PRR20EP86478 221 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 PRR20CP86479 221 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 PRR20DP86480 221 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 PRR20BP86481 221 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 PRR20AP86496 221 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 C17orf77Q96MU5 243 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 ADAMTSL1Q8N6G6 1762 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 MUC4Q99102 2169 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 PROP1O75360 226 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 DAZAP2Q15038 168 aaPredicted RBP5.61□□□□□ -1.51
UPF2-203ENST00000397053 PROK2Q9HC23 129 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 A0A087WZ39 114 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 DLEU1O43261 78 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 CFC1BP0CG36 223 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 CFC1P0CG37 223 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 HILS1P60008 231 aa5.61□□□□□ -1.51
UPF2-203ENST00000397053 NTN5Q8WTR8 489 aaPredicted RBP5.61□□□□□ -1.51
UPF2-203ENST00000397053 EML6Q6ZMW3 1958 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 TRBV7-3A0A075B6L6 115 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 IGLC7A0M8Q6 106 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 ZNF503-AS2A6NEH8 195 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 C9JQL5 133 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 IGKV4-1P06312 121 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 IFITM1P13164 125 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 SHISA2Q6UWI4 295 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 A0A0J9YXV3 536 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 K7EMI3 77 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 CXCL5P42830 114 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 HIGD2BQ4VC39 106 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 THSD7AQ9UPZ6 1657 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 FHL1Q13642 323 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 POU2AF1Q16633 256 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 DIRC1Q969H9 104 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 FXYD5Q96DB9 178 aa5.6□□□□□ -1.51
UPF2-203ENST00000397053 IGLC2P0DOY2 106 aa5.59□□□□□ -1.51
UPF2-203ENST00000397053 IGLC3P0DOY3 106 aa5.59□□□□□ -1.51
UPF2-203ENST00000397053 USP9XQ93008 2570 aaPredicted RBP5.59□□□□□ -1.51
UPF2-203ENST00000397053 IGF2RP11717 2491 aa5.59□□□□□ -1.51
UPF2-203ENST00000397053 RBAKDNA6NC62 111 aa5.59□□□□□ -1.51
UPF2-203ENST00000397053 GAGE12HA6NDE8 117 aa5.59□□□□□ -1.51
UPF2-203ENST00000397053 TMEM61Q8N0U2 210 aa5.59□□□□□ -1.51
UPF2-203ENST00000397053 C7orf33Q8WU49 177 aa5.59□□□□□ -1.51
UPF2-203ENST00000397053 FGF23Q9GZV9 251 aaPredicted RBP5.59□□□□□ -1.51
UPF2-203ENST00000397053 DLEC1Q9Y238 1755 aa5.59□□□□□ -1.51
UPF2-203ENST00000397053 IGHG2P01859 326 aa5.59□□□□□ -1.51
UPF2-203ENST00000397053 PLA2G5P39877 138 aa5.59□□□□□ -1.51
UPF2-203ENST00000397053 ADORA2A-AS1P86434 159 aa5.59□□□□□ -1.51
UPF2-203ENST00000397053 SPATA25Q9BR10 227 aa5.59□□□□□ -1.51
UPF2-203ENST00000397053 PTPRFP10586 1907 aa5.59□□□□□ -1.51
UPF2-203ENST00000397053 ABCA12Q86UK0 2595 aa5.59□□□□□ -1.52
UPF2-203ENST00000397053 DEFB125Q8N687 156 aa5.58□□□□□ -1.52
UPF2-203ENST00000397053 INAFM1C9JVW0 142 aa5.58□□□□□ -1.52
UPF2-203ENST00000397053 NCR3O14931 201 aa5.58□□□□□ -1.52
UPF2-203ENST00000397053 IL15RAQ13261 267 aa5.58□□□□□ -1.52
UPF2-203ENST00000397053 DEFB131BA0A096LNP1 70 aa5.58□□□□□ -1.52
UPF2-203ENST00000397053 DNAJC9-AS1A6NH13 148 aa5.58□□□□□ -1.52
UPF2-203ENST00000397053 H3BQ85 93 aa5.58□□□□□ -1.52
UPF2-203ENST00000397053 CCL25O15444 150 aa5.58□□□□□ -1.52
UPF2-203ENST00000397053 DSCAML1Q8TD84 2053 aa5.58□□□□□ -1.52
UPF2-203ENST00000397053 ARAP2Q8WZ64 1704 aa5.58□□□□□ -1.52
UPF2-203ENST00000397053 PRSS47A8MTI9 375 aa5.58□□□□□ -1.52
UPF2-203ENST00000397053 C9orf118A6NHY6 69 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 F8W1H4 67 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 K7EMT4 169 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 COX8AP10176 69 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 PYY3Q5JQD4 70 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 Q8N1Y9 231 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 DKK2Q9UBU2 259 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 V9GYV3 84 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 WIPF3A6NGB9 483 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 K7ERS5 55 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 FOCADQ5VW36 1801 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 HEATR5AQ86XA9 2040 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 H3BMG7 143 aa5.57□□□□□ -1.52
UPF2-203ENST00000397053 C5orf56Q8N8D9 126 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms