RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 LINC00479Q96M42 142 aa5.39□□□□□ -1.55
SCFD1-202ENST00000396629 PARLQ9H300 379 aa5.39□□□□□ -1.55
SCFD1-202ENST00000396629 C11orf21Q9P2W6 132 aa5.39□□□□□ -1.55
SCFD1-202ENST00000396629 Q9UF83 564 aa5.39□□□□□ -1.55
SCFD1-202ENST00000396629 PVALBP20472 110 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-202ENST00000396629 FGF8P55075 233 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-202ENST00000396629 STX12Q86Y82 276 aa5.38□□□□□ -1.55
SCFD1-202ENST00000396629 ARL6IP6Q8N6S5 226 aa5.38□□□□□ -1.55
SCFD1-202ENST00000396629 LINC01600Q96MT4 127 aa5.38□□□□□ -1.55
SCFD1-202ENST00000396629 SAMD10Q9BYL1 202 aa5.38□□□□□ -1.55
SCFD1-202ENST00000396629 MRPS26Q9BYN8 205 aaKnown RBP5.38□□□□□ -1.55
SCFD1-202ENST00000396629 OR7C2O60412 319 aa5.38□□□□□ -1.55
SCFD1-202ENST00000396629 PRSS1P07477 247 aa5.38□□□□□ -1.55
SCFD1-202ENST00000396629 CIRBPQ14011 172 aaKnown RBP5.38□□□□□ -1.55
SCFD1-202ENST00000396629 SDIM1Q6ZPB5 146 aa5.38□□□□□ -1.55
SCFD1-202ENST00000396629 HSD17B11Q8NBQ5 300 aa5.38□□□□□ -1.55
SCFD1-202ENST00000396629 TREM1Q9NP99 234 aa5.38□□□□□ -1.55
SCFD1-202ENST00000396629 USP17L23D6RBM5 183 aa5.37□□□□□ -1.55
SCFD1-202ENST00000396629 RNASE3P12724 160 aaKnown RBP5.37□□□□□ -1.55
SCFD1-202ENST00000396629 BTCP35070 178 aa5.37□□□□□ -1.55
SCFD1-202ENST00000396629 UBE2L3P68036 154 aaKnown RBP5.37□□□□□ -1.55
SCFD1-202ENST00000396629 IL15RAQ13261 267 aa5.37□□□□□ -1.55
SCFD1-202ENST00000396629 ODF1Q14990 250 aa5.37□□□□□ -1.55
SCFD1-202ENST00000396629 PIK3CD-AS1Q5SR53 167 aa5.37□□□□□ -1.55
SCFD1-202ENST00000396629 UFSP1Q6NVU6 142 aa5.37□□□□□ -1.55
SCFD1-202ENST00000396629 ENHOQ6UWT2 76 aa5.37□□□□□ -1.55
SCFD1-202ENST00000396629 C1orf43Q9BWL3 253 aa5.37□□□□□ -1.55
SCFD1-202ENST00000396629 OTORQ9NRC9 128 aa5.37□□□□□ -1.55
SCFD1-202ENST00000396629 A0A087WX48 190 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 PGPA6NDG6 321 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 A8MWV9 139 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 FAM25EA8MYX2 175 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 ZNF80P51504 273 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-202ENST00000396629 RPL19P84098 196 aaKnown RBP5.36□□□□□ -1.55
SCFD1-202ENST00000396629 GOLT1AQ6ZVE7 132 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 C14orf178Q8N769 122 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-202ENST00000396629 OR2T35Q8NGX2 323 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 ZC2HC1AQ96GY0 325 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 HYLS1Q96M11 299 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 H3BMQ9 156 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 TAAR5O14804 337 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 CNPY1Q3B7I2 92 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 CMTM2Q8TAZ6 248 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 THAP6Q8TBB0 222 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 NMES1Q9C002 83 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 DPH3P1Q9H4G8 78 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 KCNIP2Q9NS61 270 aa5.36□□□□□ -1.55
SCFD1-202ENST00000396629 KRTAP10-8P60410 259 aa5.35□□□□□ -1.55
SCFD1-202ENST00000396629 S100A10P60903 97 aa5.35□□□□□ -1.55
SCFD1-202ENST00000396629 RAB32Q13637 225 aa5.35□□□□□ -1.55
SCFD1-202ENST00000396629 FAM74A1Q5RGS3 127 aa5.35□□□□□ -1.55
SCFD1-202ENST00000396629 OR10G7Q8NGN6 311 aa5.35□□□□□ -1.55
SCFD1-202ENST00000396629 RNF185Q96GF1 192 aa5.35□□□□□ -1.55
SCFD1-202ENST00000396629 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
SCFD1-202ENST00000396629 NHLH2Q02577 135 aa5.35□□□□□ -1.55
SCFD1-202ENST00000396629 KHDC3LQ587J8 217 aa5.35□□□□□ -1.55
SCFD1-202ENST00000396629 KCNIP4Q6PIL6 250 aa5.35□□□□□ -1.55
SCFD1-202ENST00000396629 TMEM75Q8N9X5 138 aa5.35□□□□□ -1.55
SCFD1-202ENST00000396629 WDR61Q9GZS3 305 aaKnown RBP5.35□□□□□ -1.55
SCFD1-202ENST00000396629 JPT2Q9H910 190 aa5.35□□□□□ -1.55
SCFD1-202ENST00000396629 MBD2Q9UBB5 411 aa5.35□□□□□ -1.55
SCFD1-202ENST00000396629 S100A5P33763 92 aa5.34□□□□□ -1.55
SCFD1-202ENST00000396629 LGALSLQ3ZCW2 172 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-202ENST00000396629 OR5C1Q8NGR4 320 aa5.34□□□□□ -1.55
SCFD1-202ENST00000396629 A0A0J9YXV3 536 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 GCGP01275 180 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 TAS2R45P59539 299 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 GNG5P63218 68 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 NDFIP1Q9BT67 221 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 A0A087WYN8 130 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 CENPXA8MT69 81 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 C17orf112F2Z3M2 114 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 NOL3O60936 208 aaKnown RBP5.33□□□□□ -1.56
SCFD1-202ENST00000396629 HLA-DQA1P01909 254 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 CRPP02741 224 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 TRIQKQ629K1 86 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 KRTAP26-1Q6PEX3 210 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 OR2G3Q8NGZ4 309 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 SGK494Q96LW2 274 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 OR5AC2Q9NZP5 309 aa5.33□□□□□ -1.56
SCFD1-202ENST00000396629 SERTM2A0A1B0GWG4 89 aa5.32□□□□□ -1.56
SCFD1-202ENST00000396629 RHODO00212 210 aa5.32□□□□□ -1.56
SCFD1-202ENST00000396629 PHOX2AO14813 284 aa5.32□□□□□ -1.56
SCFD1-202ENST00000396629 CNBPP62633 177 aaKnown RBP5.32□□□□□ -1.56
SCFD1-202ENST00000396629 MIAQ16674 131 aa5.32□□□□□ -1.56
SCFD1-202ENST00000396629 C15orf54Q8N8G6 183 aa5.32□□□□□ -1.56
SCFD1-202ENST00000396629 SDHCQ99643 169 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-202ENST00000396629 SEC22CQ9BRL7 303 aa5.32□□□□□ -1.56
SCFD1-202ENST00000396629 PLAC8Q9NZF1 115 aa5.32□□□□□ -1.56
SCFD1-202ENST00000396629 TMEM262E9PQX1 116 aa5.31□□□□□ -1.56
SCFD1-202ENST00000396629 UBE2D3P61077 147 aa5.31□□□□□ -1.56
SCFD1-202ENST00000396629 UBE2D2P62837 147 aa5.31□□□□□ -1.56
SCFD1-202ENST00000396629 SMUG1Q53HV7 270 aa5.31□□□□□ -1.56
SCFD1-202ENST00000396629 WDR73Q6P4I2 378 aa5.31□□□□□ -1.56
SCFD1-202ENST00000396629 CLRN3Q8NCR9 226 aa5.31□□□□□ -1.56
SCFD1-202ENST00000396629 SPACA4Q8TDM5 124 aa5.31□□□□□ -1.56
SCFD1-202ENST00000396629 PSG8Q9UQ74 426 aa5.31□□□□□ -1.56
SCFD1-202ENST00000396629 KIF25-AS1Q9Y6Z4 181 aa5.31□□□□□ -1.56
SCFD1-202ENST00000396629 LPAP08519 4548 aa5.31□□□□□ -1.56
SCFD1-202ENST00000396629 IGKV3D-20A0A0C4DH25 116 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms