RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 TMEM170BQ5T4T1 132 aa13.85□□□□□ -0.19
HERPUD2-202ENST00000396081 ASH1LQ9NR48 2969 aaKnown RBP13.85□□□□□ -0.19
HERPUD2-202ENST00000396081 NDUFA11Q86Y39 141 aa13.84□□□□□ -0.19
HERPUD2-202ENST00000396081 ODF3BA8MYP8 253 aa13.84□□□□□ -0.19
HERPUD2-202ENST00000396081 IGHV4-4A0A075B6R2 117 aa13.84□□□□□ -0.19
HERPUD2-202ENST00000396081 Q6ZS46 218 aa13.84□□□□□ -0.19
HERPUD2-202ENST00000396081 Q8N9W7 124 aa13.84□□□□□ -0.19
HERPUD2-202ENST00000396081 CCDC140Q96MF4 163 aa13.84□□□□□ -0.19
HERPUD2-202ENST00000396081 CD7P09564 240 aa13.83□□□□□ -0.2
HERPUD2-202ENST00000396081 HERVK_113P61574 105 aa13.83□□□□□ -0.2
HERPUD2-202ENST00000396081 RPL11P62913 178 aaKnown RBP13.83□□□□□ -0.2
HERPUD2-202ENST00000396081 C9orf47Q6ZRZ4 202 aa13.83□□□□□ -0.2
HERPUD2-202ENST00000396081 RAX2Q96IS3 184 aa13.83□□□□□ -0.2
HERPUD2-202ENST00000396081 ANAPC13Q9BS18 74 aa13.83□□□□□ -0.2
HERPUD2-202ENST00000396081 COL6A6A6NMZ7 2263 aa13.83□□□□□ -0.2
HERPUD2-202ENST00000396081 GRNP28799 593 aaKnown RBP13.83□□□□□ -0.2
HERPUD2-202ENST00000396081 ASIPP42127 132 aa13.83□□□□□ -0.2
HERPUD2-202ENST00000396081 UBE2D3P61077 147 aa13.82□□□□□ -0.2
HERPUD2-202ENST00000396081 UBE2D2P62837 147 aa13.82□□□□□ -0.2
HERPUD2-202ENST00000396081 ANKRD29Q8N6D5 301 aa13.82□□□□□ -0.2
HERPUD2-202ENST00000396081 ANXA2RQ3ZCQ2 193 aa13.82□□□□□ -0.2
HERPUD2-202ENST00000396081 FAM110DQ8TAY7 271 aaPredicted RBP13.82□□□□□ -0.2
HERPUD2-202ENST00000396081 LINC00527Q9UJ94 153 aa13.82□□□□□ -0.2
HERPUD2-202ENST00000396081 TP53TG1Q9Y2A0 90 aa13.82□□□□□ -0.2
HERPUD2-202ENST00000396081 A0A0J9YY99 117 aa13.82□□□□□ -0.2
HERPUD2-202ENST00000396081 GNRH2O43555 120 aa13.82□□□□□ -0.2
HERPUD2-202ENST00000396081 COX6B1P14854 86 aa13.82□□□□□ -0.2
HERPUD2-202ENST00000396081 RNASE4P34096 147 aaKnown RBP13.82□□□□□ -0.2
HERPUD2-202ENST00000396081 C20orf173Q96LM9 149 aa13.81□□□□□ -0.2
HERPUD2-202ENST00000396081 M0R1W7 72 aa13.81□□□□□ -0.2
HERPUD2-202ENST00000396081 ZNF688P0C7X2 276 aa13.81□□□□□ -0.2
HERPUD2-202ENST00000396081 RPL39P62891 51 aaKnown RBP13.81□□□□□ -0.2
HERPUD2-202ENST00000396081 Q8N6K4 173 aa13.81□□□□□ -0.2
HERPUD2-202ENST00000396081 CFC1BP0CG36 223 aa13.8□□□□□ -0.2
HERPUD2-202ENST00000396081 CFC1P0CG37 223 aa13.8□□□□□ -0.2
HERPUD2-202ENST00000396081 SPTAN1Q13813 2472 aaKnown RBP13.8□□□□□ -0.2
HERPUD2-202ENST00000396081 EEF1AKMT3Q96AZ1 226 aa13.8□□□□□ -0.2
HERPUD2-202ENST00000396081 SS18L2Q9UHA2 77 aa13.8□□□□□ -0.2
HERPUD2-202ENST00000396081 TRAV21A0A0B4J279 112 aa13.79□□□□□ -0.2
HERPUD2-202ENST00000396081 F5H697 171 aa13.79□□□□□ -0.2
HERPUD2-202ENST00000396081 RELNP78509 3460 aa13.79□□□□□ -0.2
HERPUD2-202ENST00000396081 C9JAW5 83 aa13.79□□□□□ -0.2
HERPUD2-202ENST00000396081 F6UB75 175 aa13.79□□□□□ -0.2
HERPUD2-202ENST00000396081 CRYGDP07320 174 aa13.79□□□□□ -0.2
HERPUD2-202ENST00000396081 OR10J6PQ8NGY7 276 aa13.79□□□□□ -0.2
HERPUD2-202ENST00000396081 TSPEAR-AS2P59090 65 aa13.78□□□□□ -0.2
HERPUD2-202ENST00000396081 ZFAND6Q6FIF0 208 aa13.78□□□□□ -0.2
HERPUD2-202ENST00000396081 TEX29Q8N6K0 151 aa13.78□□□□□ -0.2
HERPUD2-202ENST00000396081 TRBV20-1A0A075B6N2 111 aa13.78□□□□□ -0.2
HERPUD2-202ENST00000396081 C10orf126Q8N4M7 172 aa13.78□□□□□ -0.2
HERPUD2-202ENST00000396081 IGHV3-64A0A075B6Q5 118 aa13.77□□□□□ -0.2
HERPUD2-202ENST00000396081 PRO1854Q9UHT4 67 aa13.77□□□□□ -0.2
HERPUD2-202ENST00000396081 ERG28Q9UKR5 140 aa13.77□□□□□ -0.2
HERPUD2-202ENST00000396081 CEP295Q9C0D2 2601 aa13.77□□□□□ -0.2
HERPUD2-202ENST00000396081 TRPT1Q86TN4 253 aaKnown RBP13.77□□□□□ -0.21
HERPUD2-202ENST00000396081 ZFAND2AQ8N6M9 145 aa13.77□□□□□ -0.21
HERPUD2-202ENST00000396081 Q8NA96 180 aa13.77□□□□□ -0.21
HERPUD2-202ENST00000396081 JPT2Q9H910 190 aa13.77□□□□□ -0.21
HERPUD2-202ENST00000396081 MRPL53Q96EL3 112 aaKnown RBP13.77□□□□□ -0.21
HERPUD2-202ENST00000396081 IGLV4-69A0A075B6H9 119 aa13.76□□□□□ -0.21
HERPUD2-202ENST00000396081 RNF223E7ERA6 249 aa13.76□□□□□ -0.21
HERPUD2-202ENST00000396081 TSHBP01222 138 aa13.76□□□□□ -0.21
HERPUD2-202ENST00000396081 Q1RN00 199 aa13.76□□□□□ -0.21
HERPUD2-202ENST00000396081 A0A087WWL8 130 aa13.76□□□□□ -0.21
HERPUD2-202ENST00000396081 SLC25A20O43772 301 aa13.76□□□□□ -0.21
HERPUD2-202ENST00000396081 PMVKQ15126 192 aa13.76□□□□□ -0.21
HERPUD2-202ENST00000396081 BEX4Q9NWD9 120 aaPredicted RBP13.76□□□□□ -0.21
HERPUD2-202ENST00000396081 IGHV3-30P01768 117 aa13.75□□□□□ -0.21
HERPUD2-202ENST00000396081 IGHV3-30-5P0DP03 117 aa13.75□□□□□ -0.21
HERPUD2-202ENST00000396081 LGALS3P17931 250 aaKnown RBP13.75□□□□□ -0.21
HERPUD2-202ENST00000396081 CRIP2P52943 208 aaPredicted RBP13.75□□□□□ -0.21
HERPUD2-202ENST00000396081 TRAV2A0A0B4J234 112 aa13.75□□□□□ -0.21
HERPUD2-202ENST00000396081 ZFP36P26651 326 aaKnown RBP13.75□□□□□ -0.21
HERPUD2-202ENST00000396081 C9orf139Q6ZV77 190 aa13.75□□□□□ -0.21
HERPUD2-202ENST00000396081 EBI3Q14213 229 aa13.74□□□□□ -0.21
HERPUD2-202ENST00000396081 GPHB5Q86YW7 130 aa13.74□□□□□ -0.21
HERPUD2-202ENST00000396081 LINC00477Q96M19 166 aa13.74□□□□□ -0.21
HERPUD2-202ENST00000396081 A4D1N5 150 aa13.74□□□□□ -0.21
HERPUD2-202ENST00000396081 B5MCH6 92 aa13.74□□□□□ -0.21
HERPUD2-202ENST00000396081 PAPPA-AS1Q5QFB9 102 aa13.74□□□□□ -0.21
HERPUD2-202ENST00000396081 VCX2Q9H322 139 aa13.74□□□□□ -0.21
HERPUD2-202ENST00000396081 ZNF256Q9Y2P7 627 aaPredicted RBP13.74□□□□□ -0.21
HERPUD2-202ENST00000396081 MINOS1Q5TGZ0 78 aa13.73□□□□□ -0.21
HERPUD2-202ENST00000396081 FAM74A4Q5TZK3 123 aa13.73□□□□□ -0.21
HERPUD2-202ENST00000396081 TMEM219Q86XT9 240 aa13.73□□□□□ -0.21
HERPUD2-202ENST00000396081 MINOS1-NBL1R4GNA1 71 aa13.73□□□□□ -0.21
HERPUD2-202ENST00000396081 MUC4Q99102 2169 aa13.73□□□□□ -0.21
HERPUD2-202ENST00000396081 J3QQQ9 107 aa13.73□□□□□ -0.21
HERPUD2-202ENST00000396081 SLC25A29Q8N8R3 303 aa13.73□□□□□ -0.21
HERPUD2-202ENST00000396081 OOSP1A8MZH6 123 aa13.72□□□□□ -0.21
HERPUD2-202ENST00000396081 TMEM262E9PQX1 116 aa13.72□□□□□ -0.21
HERPUD2-202ENST00000396081 OPRPNQ99935 248 aaPredicted RBP13.72□□□□□ -0.21
HERPUD2-202ENST00000396081 ZNRF2Q8NHG8 242 aa13.72□□□□□ -0.21
HERPUD2-202ENST00000396081 SORL1Q92673 2214 aa13.72□□□□□ -0.21
HERPUD2-202ENST00000396081 TRBV7-1A0A0A6YYK4 115 aa13.72□□□□□ -0.21
HERPUD2-202ENST00000396081 PPP1R17O96001 155 aa13.72□□□□□ -0.21
HERPUD2-202ENST00000396081 IGHV4-39P01824 125 aa13.72□□□□□ -0.21
HERPUD2-202ENST00000396081 UNQ9165/PRO28630Q6UXU0 137 aa13.72□□□□□ -0.21
HERPUD2-202ENST00000396081 RNASE3P12724 160 aaKnown RBP13.71□□□□□ -0.21
HERPUD2-202ENST00000396081 SRD5A1P18405 259 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms