RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 PPDPFLQ8WWR9 84 aa8.09□□□□□ -1.11
COL4A6-203ENST00000394872 Q9H8V8 135 aa8.09□□□□□ -1.11
COL4A6-203ENST00000394872 ETDCA0A1B0GVM5 59 aa8.09□□□□□ -1.11
COL4A6-203ENST00000394872 I3L2K1 104 aa8.09□□□□□ -1.11
COL4A6-203ENST00000394872 SS18L2Q9UHA2 77 aa8.09□□□□□ -1.11
COL4A6-203ENST00000394872 DOCK11Q5JSL3 2073 aa8.09□□□□□ -1.11
COL4A6-203ENST00000394872 ROS1P08922 2347 aa8.09□□□□□ -1.12
COL4A6-203ENST00000394872 IGLV11-55A0A075B6I3 123 aa8.08□□□□□ -1.12
COL4A6-203ENST00000394872 IGLL1P15814 213 aa8.08□□□□□ -1.12
COL4A6-203ENST00000394872 C16orf54Q6UWD8 224 aa8.08□□□□□ -1.12
COL4A6-203ENST00000394872 Q8N9W7 124 aa8.08□□□□□ -1.12
COL4A6-203ENST00000394872 KIF26AQ9ULI4 1882 aaPredicted RBP8.08□□□□□ -1.12
COL4A6-203ENST00000394872 FGF23Q9GZV9 251 aaPredicted RBP8.08□□□□□ -1.12
COL4A6-203ENST00000394872 K7EIM0 57 aa8.08□□□□□ -1.12
COL4A6-203ENST00000394872 K7ERJ3 54 aa8.08□□□□□ -1.12
COL4A6-203ENST00000394872 IGLC2P0DOY2 106 aa8.08□□□□□ -1.12
COL4A6-203ENST00000394872 IGLC3P0DOY3 106 aa8.08□□□□□ -1.12
COL4A6-203ENST00000394872 C2orf70A6NJV1 201 aa8.08□□□□□ -1.12
COL4A6-203ENST00000394872 F8W1H4 67 aa8.08□□□□□ -1.12
COL4A6-203ENST00000394872 K7EP13 123 aa8.08□□□□□ -1.12
COL4A6-203ENST00000394872 MYCNOSP40205 109 aa8.08□□□□□ -1.12
COL4A6-203ENST00000394872 HERV-K104P63124 156 aa8.08□□□□□ -1.12
COL4A6-203ENST00000394872 DAZ2Q13117 558 aaKnown RBP8.08□□□□□ -1.12
COL4A6-203ENST00000394872 DAZ4Q86SG3 579 aaKnown RBP8.08□□□□□ -1.12
COL4A6-203ENST00000394872 DAZ3Q9NR90 486 aaKnown RBP8.08□□□□□ -1.12
COL4A6-203ENST00000394872 KLK5Q9Y337 293 aaPredicted RBP8.08□□□□□ -1.12
COL4A6-203ENST00000394872 DOCK10Q96BY6 2186 aa8.07□□□□□ -1.12
COL4A6-203ENST00000394872 TRAV4A0A0B4J268 109 aa8.07□□□□□ -1.12
COL4A6-203ENST00000394872 K7EMI3 77 aa8.07□□□□□ -1.12
COL4A6-203ENST00000394872 C4orf3Q8WVX3 66 aa8.07□□□□□ -1.12
COL4A6-203ENST00000394872 RIF1Q5UIP0 2472 aaKnown RBP8.07□□□□□ -1.12
COL4A6-203ENST00000394872 K7EP34 96 aa8.07□□□□□ -1.12
COL4A6-203ENST00000394872 COX7A2LO14548 114 aa8.07□□□□□ -1.12
COL4A6-203ENST00000394872 BVES-AS1Q5T3Y7 98 aa8.07□□□□□ -1.12
COL4A6-203ENST00000394872 WNK2Q9Y3S1 2297 aa8.07□□□□□ -1.12
COL4A6-203ENST00000394872 GAGE12HA6NDE8 117 aa8.07□□□□□ -1.12
COL4A6-203ENST00000394872 ZFP36P26651 326 aaKnown RBP8.07□□□□□ -1.12
COL4A6-203ENST00000394872 AMTNQ6UX39 209 aa8.07□□□□□ -1.12
COL4A6-203ENST00000394872 RPL39LQ96EH5 51 aaKnown RBP8.07□□□□□ -1.12
COL4A6-203ENST00000394872 Q8NFD4 153 aa8.07□□□□□ -1.12
COL4A6-203ENST00000394872 NOTCH4Q99466 2003 aa8.07□□□□□ -1.12
COL4A6-203ENST00000394872 KRTAP27-1Q3LI81 207 aa8.06□□□□□ -1.12
COL4A6-203ENST00000394872 CTSGP08311 255 aa8.06□□□□□ -1.12
COL4A6-203ENST00000394872 DEFB135Q30KP9 77 aa8.06□□□□□ -1.12
COL4A6-203ENST00000394872 ORMDL1Q9P0S3 153 aa8.06□□□□□ -1.12
COL4A6-203ENST00000394872 CLPSL1A2RUU4 121 aa8.06□□□□□ -1.12
COL4A6-203ENST00000394872 DEFB4AO15263 64 aa8.06□□□□□ -1.12
COL4A6-203ENST00000394872 GATA1P15976 413 aaPredicted RBP8.06□□□□□ -1.12
COL4A6-203ENST00000394872 HHLA3Q9XRX5 114 aa8.06□□□□□ -1.12
COL4A6-203ENST00000394872 SMAD5-AS1Q9Y6J3 95 aa8.06□□□□□ -1.12
COL4A6-203ENST00000394872 A0A1W2PPM0 123 aa8.05□□□□□ -1.12
COL4A6-203ENST00000394872 MRPL36Q9P0J6 103 aaKnown RBP8.05□□□□□ -1.12
COL4A6-203ENST00000394872 TIMM17AQ99595 171 aa8.05□□□□□ -1.12
COL4A6-203ENST00000394872 SIVA1O15304 175 aa8.04□□□□□ -1.12
COL4A6-203ENST00000394872 SEM1Q6ZVN7 128 aa8.04□□□□□ -1.12
COL4A6-203ENST00000394872 ETDBQ3ZM63 59 aa8.04□□□□□ -1.12
COL4A6-203ENST00000394872 C10orf91Q5T1B1 145 aa8.04□□□□□ -1.12
COL4A6-203ENST00000394872 C12orf74Q32Q52 190 aa8.04□□□□□ -1.12
COL4A6-203ENST00000394872 C15orf53Q8NAA6 179 aa8.04□□□□□ -1.12
COL4A6-203ENST00000394872 A0A1W2PNU3 283 aaPredicted RBP8.04□□□□□ -1.12
COL4A6-203ENST00000394872 Q8N7P7 452 aa8.04□□□□□ -1.12
COL4A6-203ENST00000394872 BAALC-AS2P0C853 105 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 ZGRF1Q86YA3 2104 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 Q8N1Y9 231 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 EML6Q6ZMW3 1958 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 UBE2AP49459 152 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 TM2D2Q9BX73 214 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 PRSS47A8MTI9 375 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 H3BMG7 143 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 HIST2H2BCQ6DN03 193 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 SPANXDQ9BXN6 97 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 IGLL5B9A064 214 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 DNAJC9-AS1A6NH13 148 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 B5MCH6 92 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 ANKRD29Q8N6D5 301 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 ZNF747Q9BV97 191 aa8.03□□□□□ -1.12
COL4A6-203ENST00000394872 K7EMT4 169 aa8.02□□□□□ -1.12
COL4A6-203ENST00000394872 CFC1BP0CG36 223 aa8.02□□□□□ -1.12
COL4A6-203ENST00000394872 CFC1P0CG37 223 aa8.02□□□□□ -1.12
COL4A6-203ENST00000394872 RNF138Q8WVD3 245 aa8.02□□□□□ -1.12
COL4A6-203ENST00000394872 IGKV1-17P01599 117 aa8.02□□□□□ -1.13
COL4A6-203ENST00000394872 COX7B2Q8TF08 81 aa8.02□□□□□ -1.13
COL4A6-203ENST00000394872 GTF3C1Q12789 2109 aa8.02□□□□□ -1.13
COL4A6-203ENST00000394872 ABCA1O95477 2261 aa8.02□□□□□ -1.13
COL4A6-203ENST00000394872 ADAMTS9Q9P2N4 1935 aa8.02□□□□□ -1.13
COL4A6-203ENST00000394872 WI2-2373I1.2A0A1W2PRP0 233 aa8.02□□□□□ -1.13
COL4A6-203ENST00000394872 FUSP35637 526 aaKnown RBP eCLIP8.02□□□□□ -1.13
COL4A6-203ENST00000394872 ZFP2Q6ZN57 461 aa8.02□□□□□ -1.13
COL4A6-203ENST00000394872 GPHB5Q86YW7 130 aa8.02□□□□□ -1.13
COL4A6-203ENST00000394872 DENND4CQ5VZ89 1909 aa8.02□□□□□ -1.13
COL4A6-203ENST00000394872 GPR179Q6PRD1 2367 aa8.01□□□□□ -1.13
COL4A6-203ENST00000394872 TRBV7-3A0A075B6L6 115 aa8.01□□□□□ -1.13
COL4A6-203ENST00000394872 TMEM89A2RUT3 159 aa8.01□□□□□ -1.13
COL4A6-203ENST00000394872 PRORYQ9H606 182 aa8.01□□□□□ -1.13
COL4A6-203ENST00000394872 IGHV4-28A0A0C4DH34 117 aa8.01□□□□□ -1.13
COL4A6-203ENST00000394872 RS1O15537 224 aa8.01□□□□□ -1.13
COL4A6-203ENST00000394872 SIRPDQ9H106 197 aa8.01□□□□□ -1.13
COL4A6-203ENST00000394872 PRAC2D3DTV9 90 aa8.01□□□□□ -1.13
COL4A6-203ENST00000394872 NDUFA1O15239 70 aa8.01□□□□□ -1.13
COL4A6-203ENST00000394872 IGHG2P01859 326 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms