RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 CHD6Q8TD26 2715 aa6.86□□□□□ -1.31
RTN4-206ENST00000394611 FCN3O75636 299 aa6.86□□□□□ -1.31
RTN4-206ENST00000394611 DUSP14O95147 198 aaKnown RBP6.86□□□□□ -1.31
RTN4-206ENST00000394611 PVRIGQ6DKI7 326 aa6.86□□□□□ -1.31
RTN4-206ENST00000394611 RAB1BQ9H0U4 201 aa6.86□□□□□ -1.31
RTN4-206ENST00000394611 GRNP28799 593 aaKnown RBP6.86□□□□□ -1.31
RTN4-206ENST00000394611 C1orf162Q8NEQ5 155 aaPredicted RBP6.86□□□□□ -1.31
RTN4-206ENST00000394611 LINC01548A6NM66 108 aa6.85□□□□□ -1.31
RTN4-206ENST00000394611 ZNF688P0C7X2 276 aa6.85□□□□□ -1.31
RTN4-206ENST00000394611 DOPEY1Q5JWR5 2465 aa6.85□□□□□ -1.31
RTN4-206ENST00000394611 C10orf126Q8N4M7 172 aa6.85□□□□□ -1.31
RTN4-206ENST00000394611 ERG28Q9UKR5 140 aa6.85□□□□□ -1.31
RTN4-206ENST00000394611 K7EIM0 57 aa6.85□□□□□ -1.31
RTN4-206ENST00000394611 THAP8Q8NA92 274 aa6.85□□□□□ -1.31
RTN4-206ENST00000394611 TOMM7Q9P0U1 55 aa6.85□□□□□ -1.31
RTN4-206ENST00000394611 A0A096LNJ9 63 aa6.85□□□□□ -1.31
RTN4-206ENST00000394611 TRAV8-4A0A0B4J246 113 aa6.85□□□□□ -1.31
RTN4-206ENST00000394611 FOXI1Q12951 378 aa6.85□□□□□ -1.31
RTN4-206ENST00000394611 ANKRD29Q8N6D5 301 aa6.85□□□□□ -1.31
RTN4-206ENST00000394611 AGPAT4-IT1Q9H0P7 198 aa6.85□□□□□ -1.31
RTN4-206ENST00000394611 A0A0G2JNJ9 132 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 H3BRN7 92 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 PHLDA1Q8WV24 401 aaPredicted RBP6.84□□□□□ -1.31
RTN4-206ENST00000394611 ZNF48Q96MX3 618 aaPredicted RBP6.84□□□□□ -1.31
RTN4-206ENST00000394611 Q9UFV3 132 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 IGLV2-23P01705 113 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 XGP55808 180 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 SUMO2P61956 95 aaKnown RBP6.84□□□□□ -1.31
RTN4-206ENST00000394611 MEIG1Q5JSS6 88 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 C2orf82Q6UX34 121 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 NCOR1P1Q9H4R4 102 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 KLK9Q9UKQ9 250 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 FAM215AQ9Y5M1 114 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 IGHV3-38A0A0C4DH36 116 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 RBAKDNA6NC62 111 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 F8VRH5 84 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 SLC25A20O43772 301 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 HERV-K104P63124 156 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 POU2AF1Q16633 256 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 C5orf64Q2M2E5 130 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 UFSP1Q6NVU6 142 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 C1QTNF4Q9BXJ3 329 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 KLF12Q9Y4X4 402 aa6.84□□□□□ -1.31
RTN4-206ENST00000394611 PLNP26678 52 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 OR11H6Q8NGC7 330 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 DUX3Q96PT4 197 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 CITED1Q99966 193 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 C11orf68Q9H3H3 251 aaKnown RBP6.83□□□□□ -1.32
RTN4-206ENST00000394611 E7EQL1 145 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 TMEM262E9PQX1 116 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 SYNJ2BPP57105 145 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 ZNF672Q499Z4 452 aaPredicted RBP6.83□□□□□ -1.32
RTN4-206ENST00000394611 SEM1Q6ZVN7 128 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 FAM57AQ8TBR7 257 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 IGLV1-44P01699 117 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 IGLV2-11P01706 119 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 ZNF843Q8N446 348 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 Q8N8P6 123 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 COX6CP09669 75 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 ZNF876PQ49A33 203 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 C11orf44Q8N8P7 122 aa6.83□□□□□ -1.32
RTN4-206ENST00000394611 ACANP16112 2415 aa6.82□□□□□ -1.32
RTN4-206ENST00000394611 ATP6V0E1O15342 81 aa6.82□□□□□ -1.32
RTN4-206ENST00000394611 C15orf53Q8NAA6 179 aa6.82□□□□□ -1.32
RTN4-206ENST00000394611 PPDPFLQ8WWR9 84 aa6.82□□□□□ -1.32
RTN4-206ENST00000394611 C7orf69Q9H7B7 122 aa6.82□□□□□ -1.32
RTN4-206ENST00000394611 IGHV3-16A0A0C4DH30 117 aa6.82□□□□□ -1.32
RTN4-206ENST00000394611 I3L2K1 104 aa6.82□□□□□ -1.32
RTN4-206ENST00000394611 LHBP01229 141 aa6.82□□□□□ -1.32
RTN4-206ENST00000394611 HOXB4P17483 251 aaPredicted RBP6.82□□□□□ -1.32
RTN4-206ENST00000394611 SMIM2Q9BVW6 85 aa6.82□□□□□ -1.32
RTN4-206ENST00000394611 VCX2Q9H322 139 aa6.82□□□□□ -1.32
RTN4-206ENST00000394611 TCL1BO95988 128 aa6.82□□□□□ -1.32
RTN4-206ENST00000394611 ORMDL2Q53FV1 153 aa6.82□□□□□ -1.32
RTN4-206ENST00000394611 Q6ZUT4 128 aa6.82□□□□□ -1.32
RTN4-206ENST00000394611 A0A087WX48 190 aa6.81□□□□□ -1.32
RTN4-206ENST00000394611 A4D1N5 150 aa6.81□□□□□ -1.32
RTN4-206ENST00000394611 TEX22C9J3V5 150 aa6.81□□□□□ -1.32
RTN4-206ENST00000394611 CGB3P0DN86 165 aa6.81□□□□□ -1.32
RTN4-206ENST00000394611 CGB7P0DN87 165 aa6.81□□□□□ -1.32
RTN4-206ENST00000394611 CD28P10747 220 aa6.81□□□□□ -1.32
RTN4-206ENST00000394611 GNLYP22749 145 aa6.81□□□□□ -1.32
RTN4-206ENST00000394611 HIST2H2BDQ6DRA6 164 aa6.81□□□□□ -1.32
RTN4-206ENST00000394611 CEMP1Q6PRD7 247 aaPredicted RBP6.81□□□□□ -1.32
RTN4-206ENST00000394611 TEX49A0A1B0GTD5 131 aa6.81□□□□□ -1.32
RTN4-206ENST00000394611 LGALS1P09382 135 aaKnown RBP6.81□□□□□ -1.32
RTN4-206ENST00000394611 PSMG4Q5JS54 123 aa6.8□□□□□ -1.32
RTN4-206ENST00000394611 VMO1Q7Z5L0 202 aa6.8□□□□□ -1.32
RTN4-206ENST00000394611 OR13C6PQ8NH95 151 aa6.8□□□□□ -1.32
RTN4-206ENST00000394611 C11orf86A6NJI1 115 aa6.8□□□□□ -1.32
RTN4-206ENST00000394611 IGHV3-53P01767 116 aa6.8□□□□□ -1.32
RTN4-206ENST00000394611 CLEC2BQ92478 149 aa6.8□□□□□ -1.32
RTN4-206ENST00000394611 SDHAF1A6NFY7 115 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 HOXD3P31249 432 aaPredicted RBP6.79□□□□□ -1.32
RTN4-206ENST00000394611 MYCNOSP40205 109 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 EDA2RQ9HAV5 297 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 SMPXQ9UHP9 88 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 A8MZ25 164 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 E9PLD3 99 aa6.79□□□□□ -1.32
RTN4-206ENST00000394611 OVOL3O00110 214 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms