RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CXCL12P48061 93 aa2.55□□□□□ -2
XRN1-202ENST00000392981 ZNF80P51504 273 aaPredicted RBP2.55□□□□□ -2
XRN1-202ENST00000392981 LYPD2Q6UXB3 125 aa2.55□□□□□ -2
XRN1-202ENST00000392981 PFN4Q8NHR9 129 aa2.55□□□□□ -2
XRN1-202ENST00000392981 TMEM133Q9H2Q1 129 aa2.55□□□□□ -2
XRN1-202ENST00000392981 ANK3Q12955 4377 aaKnown RBP2.54□□□□□ -2
XRN1-202ENST00000392981 TRAV14DV4A0A0A6YYC5 116 aa2.54□□□□□ -2
XRN1-202ENST00000392981 BUB1B-PAK6H3BSN5 160 aa2.54□□□□□ -2
XRN1-202ENST00000392981 CCDC179H3BU77 68 aa2.54□□□□□ -2
XRN1-202ENST00000392981 IGKV3-15P01624 115 aa2.54□□□□□ -2
XRN1-202ENST00000392981 CCL20P78556 96 aa2.54□□□□□ -2
XRN1-202ENST00000392981 Q8N3U1 123 aa2.54□□□□□ -2
XRN1-202ENST00000392981 IMMP1LQ96LU5 166 aa2.54□□□□□ -2
XRN1-202ENST00000392981 TNS2Q63HR2 1409 aa2.54□□□□□ -2
XRN1-202ENST00000392981 PDCD11Q14690 1871 aaKnown RBP2.54□□□□□ -2
XRN1-202ENST00000392981 ABCA7Q8IZY2 2146 aa2.54□□□□□ -2
XRN1-202ENST00000392981 IGHV1-58A0A0C4DH39 117 aa2.54□□□□□ -2
XRN1-202ENST00000392981 SIP14410 1827 aa2.54□□□□□ -2
XRN1-202ENST00000392981 NPPCP23582 126 aa2.54□□□□□ -2
XRN1-202ENST00000392981 DCANP1Q8TF63 244 aa2.54□□□□□ -2
XRN1-202ENST00000392981 SDF2Q99470 211 aa2.54□□□□□ -2
XRN1-202ENST00000392981 THSD7BQ9C0I4 1608 aa2.54□□□□□ -2
XRN1-202ENST00000392981 TRAV1-2A0A0B4J238 106 aa2.54□□□□□ -2
XRN1-202ENST00000392981 SCTP09683 121 aa2.54□□□□□ -2
XRN1-202ENST00000392981 SAA1P0DJI8 122 aaPredicted RBP2.54□□□□□ -2
XRN1-202ENST00000392981 UNQ9165/PRO28630Q6UXU0 137 aa2.54□□□□□ -2
XRN1-202ENST00000392981 WFDC9Q8NEX5 89 aa2.54□□□□□ -2
XRN1-202ENST00000392981 NUP35Q8NFH5 326 aa2.54□□□□□ -2
XRN1-202ENST00000392981 KRTAP3-1Q9BYR8 98 aa2.54□□□□□ -2
XRN1-202ENST00000392981 MYO10Q9HD67 2058 aa2.54□□□□□ -2
XRN1-202ENST00000392981 NCKAP5O14513 1909 aa2.54□□□□□ -2
XRN1-202ENST00000392981 IGKV3-7A0A075B6H7 116 aa2.54□□□□□ -2
XRN1-202ENST00000392981 IGHV3OR15-7A0A075B7D8 119 aa2.54□□□□□ -2
XRN1-202ENST00000392981 A0A1W2PQD3 144 aa2.54□□□□□ -2
XRN1-202ENST00000392981 TCL1BO95988 128 aa2.54□□□□□ -2
XRN1-202ENST00000392981 ASIPP42127 132 aa2.54□□□□□ -2
XRN1-202ENST00000392981 HAMPP81172 84 aa2.54□□□□□ -2
XRN1-202ENST00000392981 LINC01554Q52M75 96 aa2.54□□□□□ -2
XRN1-202ENST00000392981 Q8IYB0 196 aa2.54□□□□□ -2
XRN1-202ENST00000392981 TP73-AS1Q9UF72 201 aa2.54□□□□□ -2
XRN1-202ENST00000392981 ASXL3Q9C0F0 2248 aa2.53□□□□□ -2
XRN1-202ENST00000392981 CD52P31358 61 aa2.53□□□□□ -2
XRN1-202ENST00000392981 NPC2P61916 151 aa2.53□□□□□ -2
XRN1-202ENST00000392981 BVES-AS1Q5T3Y7 98 aa2.53□□□□□ -2
XRN1-202ENST00000392981 CASC10Q5T4H9 136 aa2.53□□□□□ -2
XRN1-202ENST00000392981 C22orf39Q6P5X5 142 aa2.53□□□□□ -2
XRN1-202ENST00000392981 ZNF625Q96I27 306 aaPredicted RBP2.53□□□□□ -2
XRN1-202ENST00000392981 CARD19Q96LW7 228 aa2.53□□□□□ -2
XRN1-202ENST00000392981 F8W1H4 67 aa2.53□□□□□ -2
XRN1-202ENST00000392981 NDUFA3O95167 84 aa2.53□□□□□ -2
XRN1-202ENST00000392981 IGKV1-5P01602 117 aa2.53□□□□□ -2
XRN1-202ENST00000392981 TLX1NBP0CAT3 122 aa2.53□□□□□ -2
XRN1-202ENST00000392981 LYZL2Q7Z4W2 148 aa2.53□□□□□ -2
XRN1-202ENST00000392981 AQP3Q92482 292 aa2.53□□□□□ -2
XRN1-202ENST00000392981 TRPM7Q96QT4 1865 aa2.53□□□□□ -2
XRN1-202ENST00000392981 PLXNA1Q9UIW2 1896 aa2.53□□□□□ -2
XRN1-202ENST00000392981 RPS11P62280 158 aaKnown RBP eCLIP2.53□□□□□ -2
XRN1-202ENST00000392981 CIRBP-AS1Q8TBR5 109 aa2.53□□□□□ -2
XRN1-202ENST00000392981 BCL2L10Q9HD36 194 aa2.53□□□□□ -2
XRN1-202ENST00000392981 LY96Q9Y6Y9 160 aa2.53□□□□□ -2
XRN1-202ENST00000392981 KIAA0100Q14667 2235 aaKnown RBP2.53□□□□□ -2
XRN1-202ENST00000392981 BAZ2AQ9UIF9 1905 aaKnown RBP2.53□□□□□ -2.01
XRN1-202ENST00000392981 IGKV1D-43A0A0B4J1Z2 117 aa2.53□□□□□ -2.01
XRN1-202ENST00000392981 WISP3O95389 354 aaPredicted RBP2.53□□□□□ -2.01
XRN1-202ENST00000392981 SUPT4H1P63272 117 aaKnown RBP2.53□□□□□ -2.01
XRN1-202ENST00000392981 ZFP2Q6ZN57 461 aa2.53□□□□□ -2.01
XRN1-202ENST00000392981 ZNF818PQ6ZRF7 136 aa2.53□□□□□ -2.01
XRN1-202ENST00000392981 Q6ZUT4 128 aa2.53□□□□□ -2.01
XRN1-202ENST00000392981 Q96M85 177 aa2.53□□□□□ -2.01
XRN1-202ENST00000392981 PTPRSQ13332 1948 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 LY6G6DO95868 133 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 CRYGAP11844 174 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 IFI27P40305 119 aaPredicted RBP2.52□□□□□ -2.01
XRN1-202ENST00000392981 RPL28P46779 137 aaKnown RBP2.52□□□□□ -2.01
XRN1-202ENST00000392981 FOXA3P55318 350 aaPredicted RBP2.52□□□□□ -2.01
XRN1-202ENST00000392981 FAM74A4Q5TZK3 123 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 RPP25LQ8N5L8 163 aaKnown RBP2.52□□□□□ -2.01
XRN1-202ENST00000392981 FAM216BQ8N7L0 139 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 TMEM105Q8N8V8 129 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 CLEC2BQ92478 149 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 R4GMQ9 66 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 TPRP12270 2363 aaKnown RBP2.52□□□□□ -2.01
XRN1-202ENST00000392981 CGAP01215 116 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 IGLV7-43P04211 117 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 ZNF117Q03924 483 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 C15orf32Q32M92 178 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 ZNF575Q86XF7 245 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 Q8N1X5 172 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 PPDPFLQ8WWR9 84 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 RETNLBQ9BQ08 111 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 CMYA5Q8N3K9 4069 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.52□□□□□ -2.01
XRN1-202ENST00000392981 BPY2O14599 106 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 NPYP01303 97 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 LINC00158P58513 81 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 SPINK9Q5DT21 86 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 MIC13Q5XKP0 118 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 ATP6V0E2Q8NHE4 81 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 CLDND2Q8NHS1 167 aa2.52□□□□□ -2.01
XRN1-202ENST00000392981 COL4A6Q14031 1691 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms