RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 Q8IYB0 196 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 NUP37Q8NFH4 326 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 IGF2BP2-AS1Q96M15 143 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 C1orf147Q96MC9 270 aaPredicted RBP2.05□□□□□ -2.08
TRAV41-201ENST00000390468 C18orf15Q96N68 181 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 ODF3Q96PU9 254 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 SHANK2-AS3Q9BTD1 123 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 CXXC4Q9H2H0 198 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 GNG12Q9UBI6 72 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 AMMECR1Q9Y4X0 333 aaPredicted RBP2.05□□□□□ -2.08
TRAV41-201ENST00000390468 SERP1Q9Y6X1 66 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 ATMQ13315 3056 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.05□□□□□ -2.08
TRAV41-201ENST00000390468 DMXL2Q8TDJ6 3036 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 SMG1Q96Q15 3661 aaKnown RBP2.04□□□□□ -2.08
TRAV41-201ENST00000390468 IGLV3-9A0A075B6K5 115 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.04□□□□□ -2.08
TRAV41-201ENST00000390468 IGKV1-12A0A0C4DH73 117 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 IGHV3-64DA0A0J9YX35 117 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 TRBV10-2A0A0K0K1G8 114 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 A0A0U1RQV1 116 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 A0A1B0GUT8 65 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 hADV29S1A0JD25 119 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 TEX22C9J3V5 150 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 TMEM178BH3BS89 294 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 PEX7O00628 323 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 SPINT2O43291 252 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 TCL1BO95988 128 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 LTAP01374 205 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 IGKV1D-12P01611 117 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 IGHV3-13P01766 116 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 ELANEP08246 267 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 FRMD6-AS1P0C7T7 363 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 P0DMU3 169 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 FAM231AP0DMU4 169 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 FAM231CP0DMU5 169 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 SYNJ2BPP57105 145 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 ZNF816Q0VGE8 651 aaPredicted RBP2.04□□□□□ -2.08
TRAV41-201ENST00000390468 FBXL19-AS1Q494R0 122 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 ZC2HC1BQ5TFG8 222 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 C2orf82Q6UX34 121 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 VPS13CQ709C8 3753 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 WDR86Q86TI4 376 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 ORMDL3Q8N138 153 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 C1orf158Q8N1D5 194 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 EXOC3-AS1Q8N2X6 119 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 SERP2Q8N6R1 65 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 FAM110DQ8TAY7 271 aaPredicted RBP2.04□□□□□ -2.08
TRAV41-201ENST00000390468 UBALD1Q8TB05 177 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 LINC01560Q8TB33 94 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 ITLN1Q8WWA0 313 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 FMC1Q96HJ9 113 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 URB1-AS1Q96HZ7 61 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 CYYR1Q96J86 154 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 PGLYRP4Q96LB8 373 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 LINC01600Q96MT4 127 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 DSCR8Q96T75 97 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 ABCA2Q9BZC7 2435 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 CCL28Q9NRJ3 127 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 CALYQ9NYX4 217 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 ZNF492Q9P255 531 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 PEMTQ9UBM1 199 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 ANKRD17O75179 2603 aaKnown RBP2.04□□□□□ -2.08
TRAV41-201ENST00000390468 USP24Q9UPU5 2620 aa2.04□□□□□ -2.08
TRAV41-201ENST00000390468 FAM208BQ5VWN6 2430 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 BOD1L1Q8NFC6 3051 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 TRBV7-3A0A075B6L6 115 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 TRAV26-2A0A0B4J265 109 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 A0A0B4J2C4 111 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 CGB1A6NKQ9 187 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 C15orf61A6NNL5 157 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 C17orf100A8MU93 164 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 SRRM5B3KS81 715 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 NPIPB11E5RHQ5 1161 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 LY6LH3BQJ8 138 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 WNT9BO14905 357 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 IGHV1-46P01743 117 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 PRB1P04280 392 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 ZNF137PP52743 207 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 RPL18AQ02543 176 aaKnown RBP2.03□□□□□ -2.08
TRAV41-201ENST00000390468 ZNF672Q499Z4 452 aaPredicted RBP2.03□□□□□ -2.08
TRAV41-201ENST00000390468 LINC01620Q4KN68 170 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 GDF5OSQ5U4N7 250 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 FAM104BQ5XKR9 115 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 Q6ZR03 302 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 ZNF826PQ6ZT77 177 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 FAM19A1Q7Z5A9 133 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 POM121L12Q8N7R1 296 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 C10orf105Q8TEF2 133 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 ITLN2Q8WWU7 325 aaPredicted RBP2.03□□□□□ -2.08
TRAV41-201ENST00000390468 NABP2Q9BQ15 211 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 TMEM243Q9BU79 118 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 FGF23Q9GZV9 251 aaPredicted RBP2.03□□□□□ -2.08
TRAV41-201ENST00000390468 PRO1854Q9UHT4 67 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 KLK5Q9Y337 293 aaPredicted RBP2.03□□□□□ -2.08
TRAV41-201ENST00000390468 CFAP47Q6ZTR5 3102 aa2.03□□□□□ -2.08
TRAV41-201ENST00000390468 DSPP15924 2871 aaKnown RBP2.03□□□□□ -2.08
TRAV41-201ENST00000390468 NAV3Q8IVL0 2385 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 TRBV6-6A0A0A6YYG2 114 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 A0A0G2JRQ6 117 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms