RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 MYO18BQ8IUG5 2567 aa7.09□□□□□ -1.28
LIMCH1-202ENST00000381753 IGHV4-4A0A075B6R2 117 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 BRI3O95415 125 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 PRR20EP86478 221 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 PRR20CP86479 221 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 PRR20DP86480 221 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 PRR20BP86481 221 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 PRR20AP86496 221 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 C16orf90A8MZG2 172 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 H3BRN7 92 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 CDSNQ15517 529 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 HIGD2BQ4VC39 106 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 C1orf229Q6ZS94 237 aaPredicted RBP7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 IGKV2D-26A0A0A0MRZ7 120 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 KPRPQ5T749 579 aaPredicted RBP7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 NOTCH4Q99466 2003 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 IGKV1D-8A0A087WSZ0 117 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 KIR2DL5BA0A0G2JN68 375 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 KIR2DL5BA0A0G2JPC4 375 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 SFTA2Q6UW10 78 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 KIR2DL5AQ8N109 375 aa7.08□□□□□ -1.28
LIMCH1-202ENST00000381753 COL4A3Q01955 1670 aa7.07□□□□□ -1.28
LIMCH1-202ENST00000381753 IGKV1-17P01599 117 aa7.07□□□□□ -1.28
LIMCH1-202ENST00000381753 DAZ2Q13117 558 aaKnown RBP7.07□□□□□ -1.28
LIMCH1-202ENST00000381753 DAZ4Q86SG3 579 aaKnown RBP7.07□□□□□ -1.28
LIMCH1-202ENST00000381753 DAZ3Q9NR90 486 aaKnown RBP7.07□□□□□ -1.28
LIMCH1-202ENST00000381753 DSCAMO60469 2012 aa7.07□□□□□ -1.28
LIMCH1-202ENST00000381753 C15orf65H3BRN8 121 aa7.07□□□□□ -1.28
LIMCH1-202ENST00000381753 NAV2Q8IVL1 2488 aa7.07□□□□□ -1.28
LIMCH1-202ENST00000381753 DENND4AQ7Z401 1863 aa7.07□□□□□ -1.28
LIMCH1-202ENST00000381753 SDHAF1A6NFY7 115 aa7.07□□□□□ -1.28
LIMCH1-202ENST00000381753 NIT1Q86X76 327 aa7.07□□□□□ -1.28
LIMCH1-202ENST00000381753 Q8N976 141 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 C14orf144Q96I85 54 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 OSTCQ9NRP0 149 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 IGLV2-11P01706 119 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 NPSP0C0P6 89 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 C20orf144Q9BQM9 153 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 ABCA2Q9BZC7 2435 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 MALRD1Q5VYJ5 2156 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 WT1-ASQ06250 92 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 LINC00337Q8N6G1 96 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 MED13LQ71F56 2210 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 GNRH2O43555 120 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 TRBV12-3P01733 135 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 IFI27L1Q96BM0 104 aa7.06□□□□□ -1.28
LIMCH1-202ENST00000381753 TRBV19A0A075B6N1 114 aa7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 GAGE12HA6NDE8 117 aa7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 HERVK_113P63121 156 aa7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 C16orf54Q6UWD8 224 aa7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 ESDP10768 282 aa7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 CHCHD1Q96BP2 118 aaKnown RBP7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 ZNF581Q9P0T4 197 aa7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 TP53TG1Q9Y2A0 90 aa7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 FAM236DA0A1B0GTK5 79 aa7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 IGKV2-29A2NJV5 120 aaPredicted RBP7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 ODF3BA8MYP8 253 aa7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 FAM236CP0DP71 79 aa7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 FAM19A2Q8N3H0 131 aa7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 IGF2RP11717 2491 aa7.05□□□□□ -1.28
LIMCH1-202ENST00000381753 D6R8Y8 96 aa7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 NDUFB1O75438 58 aa7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 INAFM2P0DMQ5 153 aa7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 HIGD2AQ9BW72 106 aa7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 TSC2P49815 1807 aa7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 LTBP2Q14767 1821 aa7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 CTAG1AP78358 180 aa7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 SPAG11BQ08648 103 aa7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 PUSL1Q8N0Z8 303 aaKnown RBP7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 TMEM75Q8N9X5 138 aa7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 C3orf84H3BNL1 204 aa7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 LGALS9O00182 355 aa7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 RNASE13Q5GAN3 156 aaKnown RBP7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 C11orf53Q8IXP5 236 aa7.04□□□□□ -1.28
LIMCH1-202ENST00000381753 UBE2D2P62837 147 aa7.03□□□□□ -1.28
LIMCH1-202ENST00000381753 Q86TA4 180 aa7.03□□□□□ -1.28
LIMCH1-202ENST00000381753 H3BUT2 72 aa7.03□□□□□ -1.28
LIMCH1-202ENST00000381753 C10orf99Q6UWK7 81 aa7.03□□□□□ -1.28
LIMCH1-202ENST00000381753 FREM1Q5H8C1 2179 aa7.03□□□□□ -1.28
LIMCH1-202ENST00000381753 IGLC1P0CG04 106 aa7.03□□□□□ -1.28
LIMCH1-202ENST00000381753 XGP55808 180 aa7.03□□□□□ -1.28
LIMCH1-202ENST00000381753 NMBP08949 121 aa7.03□□□□□ -1.28
LIMCH1-202ENST00000381753 CHAC1Q9BUX1 264 aa7.03□□□□□ -1.28
LIMCH1-202ENST00000381753 TRAV4A0A0B4J268 109 aa7.02□□□□□ -1.28
LIMCH1-202ENST00000381753 hADV29S1A0JD25 119 aa7.02□□□□□ -1.28
LIMCH1-202ENST00000381753 GFI1Q99684 422 aa7.02□□□□□ -1.28
LIMCH1-202ENST00000381753 C16orf95Q9H693 158 aa7.02□□□□□ -1.28
LIMCH1-202ENST00000381753 IGLV11-55A0A075B6I3 123 aa7.02□□□□□ -1.29
LIMCH1-202ENST00000381753 FNDC10F2Z333 226 aa7.02□□□□□ -1.29
LIMCH1-202ENST00000381753 IFITM3Q01628 133 aa7.02□□□□□ -1.29
LIMCH1-202ENST00000381753 FAM19A1Q7Z5A9 133 aa7.02□□□□□ -1.29
LIMCH1-202ENST00000381753 H2BFSP57053 126 aa7.02□□□□□ -1.29
LIMCH1-202ENST00000381753 CARD19Q96LW7 228 aa7.02□□□□□ -1.29
LIMCH1-202ENST00000381753 LINC00474Q9P2X8 69 aa7.02□□□□□ -1.29
LIMCH1-202ENST00000381753 RITA1Q96K30 269 aa7.02□□□□□ -1.29
LIMCH1-202ENST00000381753 BOD1L2Q8IYS8 172 aa7.02□□□□□ -1.29
LIMCH1-202ENST00000381753 PLXNA2O75051 1894 aa7.01□□□□□ -1.29
LIMCH1-202ENST00000381753 LRRK2Q5S007 2527 aa7.01□□□□□ -1.29
LIMCH1-202ENST00000381753 TNRC6AQ8NDV7 1962 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms