RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 PET117Q6UWS5 81 aa14.32□□□□□ -0.12
GMDS-201ENST00000380805 ZNF747Q9BV97 191 aa14.32□□□□□ -0.12
GMDS-201ENST00000380805 LOC389332A0A1B0GUA5 103 aa14.32□□□□□ -0.12
GMDS-201ENST00000380805 MRAP2Q96G30 205 aa14.32□□□□□ -0.12
GMDS-201ENST00000380805 MAP1LC3CQ9BXW4 147 aa14.32□□□□□ -0.12
GMDS-201ENST00000380805 NXT2Q9NPJ8 142 aaKnown RBP14.32□□□□□ -0.12
GMDS-201ENST00000380805 NIPBLQ6KC79 2804 aaeCLIP14.31□□□□□ -0.12
GMDS-201ENST00000380805 GAS8-AS1O95177 125 aa14.31□□□□□ -0.12
GMDS-201ENST00000380805 S100A4P26447 101 aaKnown RBP14.31□□□□□ -0.12
GMDS-201ENST00000380805 AMTNQ6UX39 209 aa14.31□□□□□ -0.12
GMDS-201ENST00000380805 NRACQ8N912 160 aa14.31□□□□□ -0.12
GMDS-201ENST00000380805 DLX4Q92988 240 aaPredicted RBP14.31□□□□□ -0.12
GMDS-201ENST00000380805 MIEN1Q9BRT3 115 aa14.31□□□□□ -0.12
GMDS-201ENST00000380805 C20orf202A1L168 122 aa14.3□□□□□ -0.12
GMDS-201ENST00000380805 TSPOP30536 169 aa14.3□□□□□ -0.12
GMDS-201ENST00000380805 FAM159AQ6UWV7 190 aa14.3□□□□□ -0.12
GMDS-201ENST00000380805 GNRH2O43555 120 aa14.29□□□□□ -0.12
GMDS-201ENST00000380805 HBDP02042 147 aa14.29□□□□□ -0.12
GMDS-201ENST00000380805 CDKN1BP46527 198 aa14.29□□□□□ -0.12
GMDS-201ENST00000380805 SPATA45Q537H7 98 aa14.29□□□□□ -0.12
GMDS-201ENST00000380805 KHDC1LQ5JSQ8 128 aa14.29□□□□□ -0.12
GMDS-201ENST00000380805 OR2K2Q8NGT1 345 aa14.29□□□□□ -0.12
GMDS-201ENST00000380805 PHLDA3Q9Y5J5 127 aa14.29□□□□□ -0.12
GMDS-201ENST00000380805 IGLV2-18A0A075B6J9 118 aa14.29□□□□□ -0.12
GMDS-201ENST00000380805 TRAV9-2A0A087WT02 112 aa14.29□□□□□ -0.12
GMDS-201ENST00000380805 POM121L12Q8N7R1 296 aa14.29□□□□□ -0.12
GMDS-201ENST00000380805 HILS1P60008 231 aa14.28□□□□□ -0.12
GMDS-201ENST00000380805 LINC01545Q5VT33 79 aa14.28□□□□□ -0.12
GMDS-201ENST00000380805 TMEM61Q8N0U2 210 aa14.28□□□□□ -0.12
GMDS-201ENST00000380805 DPH3P1Q9H4G8 78 aa14.28□□□□□ -0.12
GMDS-201ENST00000380805 TRAV12-3A0A0B4J271 114 aa14.27□□□□□ -0.12
GMDS-201ENST00000380805 Q8N8P6 123 aa14.27□□□□□ -0.12
GMDS-201ENST00000380805 LINC01006Q8NI28 216 aa14.27□□□□□ -0.12
GMDS-201ENST00000380805 RAX2Q96IS3 184 aa14.27□□□□□ -0.12
GMDS-201ENST00000380805 DUX3Q96PT4 197 aa14.27□□□□□ -0.12
GMDS-201ENST00000380805 MUC4Q99102 2169 aa14.27□□□□□ -0.13
GMDS-201ENST00000380805 OR4C46A6NHA9 309 aa14.27□□□□□ -0.13
GMDS-201ENST00000380805 M0R381 172 aa14.27□□□□□ -0.13
GMDS-201ENST00000380805 GATA1P15976 413 aaPredicted RBP14.27□□□□□ -0.13
GMDS-201ENST00000380805 DEFB114Q30KQ6 69 aa14.27□□□□□ -0.13
GMDS-201ENST00000380805 MRPL52Q86TS9 123 aaKnown RBP14.27□□□□□ -0.13
GMDS-201ENST00000380805 AP1S3Q96PC3 154 aa14.27□□□□□ -0.13
GMDS-201ENST00000380805 IGLC3P0DOY3 106 aa14.26□□□□□ -0.13
GMDS-201ENST00000380805 HLA-DRB4P13762 266 aa14.26□□□□□ -0.13
GMDS-201ENST00000380805 LBHQ53QV2 105 aaPredicted RBP14.26□□□□□ -0.13
GMDS-201ENST00000380805 ZNF418Q8TF45 676 aaPredicted RBP14.26□□□□□ -0.13
GMDS-201ENST00000380805 C9orf85Q96MD7 179 aa14.26□□□□□ -0.13
GMDS-201ENST00000380805 HLA-DRB4X5D2U9 266 aa14.26□□□□□ -0.13
GMDS-201ENST00000380805 CRLF1O75462 422 aa14.25□□□□□ -0.13
GMDS-201ENST00000380805 ATOH7Q8N100 152 aa14.25□□□□□ -0.13
GMDS-201ENST00000380805 TIMM8BQ9Y5J9 83 aaPredicted RBP14.25□□□□□ -0.13
GMDS-201ENST00000380805 TRAV25A0A0B4J276 109 aa14.24□□□□□ -0.13
GMDS-201ENST00000380805 NDUFA7O95182 113 aa14.24□□□□□ -0.13
GMDS-201ENST00000380805 CD28P10747 220 aa14.24□□□□□ -0.13
GMDS-201ENST00000380805 ZNF705AQ6ZN79 300 aaPredicted RBP14.24□□□□□ -0.13
GMDS-201ENST00000380805 KIF25-AS1Q9Y6Z4 181 aa14.24□□□□□ -0.13
GMDS-201ENST00000380805 AGRNO00468 2067 aa14.24□□□□□ -0.13
GMDS-201ENST00000380805 IGHV3-16A0A0C4DH30 117 aa14.24□□□□□ -0.13
GMDS-201ENST00000380805 SPINK13Q1W4C9 94 aa14.24□□□□□ -0.13
GMDS-201ENST00000380805 DYNLRB2Q8TF09 96 aa14.24□□□□□ -0.13
GMDS-201ENST00000380805 SPAG8Q99932 426 aaPredicted RBP14.24□□□□□ -0.13
GMDS-201ENST00000380805 TSSC4Q9Y5U2 329 aaPredicted RBP14.24□□□□□ -0.13
GMDS-201ENST00000380805 TRAV26-2A0A0B4J265 109 aa14.23□□□□□ -0.13
GMDS-201ENST00000380805 H3BMM0 161 aa14.23□□□□□ -0.13
GMDS-201ENST00000380805 CD7P09564 240 aa14.23□□□□□ -0.13
GMDS-201ENST00000380805 FCER1GP30273 86 aa14.23□□□□□ -0.13
GMDS-201ENST00000380805 DEFB131AP59861 70 aa14.23□□□□□ -0.13
GMDS-201ENST00000380805 MAJINQ3KP22 176 aa14.23□□□□□ -0.13
GMDS-201ENST00000380805 UQCR10Q9UDW1 63 aa14.23□□□□□ -0.13
GMDS-201ENST00000380805 TRAV12-2A0A075B6T6 113 aa14.22□□□□□ -0.13
GMDS-201ENST00000380805 IGHV1OR15-1A0A075B7D0 117 aa14.22□□□□□ -0.13
GMDS-201ENST00000380805 CCL24O00175 119 aa14.22□□□□□ -0.13
GMDS-201ENST00000380805 IGKV3-20P01619 116 aa14.22□□□□□ -0.13
GMDS-201ENST00000380805 IGLL1P15814 213 aa14.22□□□□□ -0.13
GMDS-201ENST00000380805 C20orf78Q9BR46 151 aa14.22□□□□□ -0.13
GMDS-201ENST00000380805 LINC00315P59091 139 aa14.21□□□□□ -0.13
GMDS-201ENST00000380805 C14orf178Q8N769 122 aaPredicted RBP14.21□□□□□ -0.13
GMDS-201ENST00000380805 CLUHP3Q96NS8 147 aa14.21□□□□□ -0.13
GMDS-201ENST00000380805 CITED2Q99967 270 aaPredicted RBP14.21□□□□□ -0.13
GMDS-201ENST00000380805 MAP6D1Q9H9H5 199 aa14.21□□□□□ -0.13
GMDS-201ENST00000380805 ZNF256Q9Y2P7 627 aaPredicted RBP14.21□□□□□ -0.13
GMDS-201ENST00000380805 SPRY2O43597 315 aa14.21□□□□□ -0.14
GMDS-201ENST00000380805 LGALS9BQ3B8N2 356 aa14.21□□□□□ -0.14
GMDS-201ENST00000380805 CD300EQ496F6 205 aaPredicted RBP14.21□□□□□ -0.14
GMDS-201ENST00000380805 LGALS9CQ6DKI2 356 aa14.21□□□□□ -0.14
GMDS-201ENST00000380805 RASL10AQ92737 203 aa14.21□□□□□ -0.14
GMDS-201ENST00000380805 ST20Q9HBF5 79 aa14.21□□□□□ -0.14
GMDS-201ENST00000380805 K7EMI3 77 aa14.2□□□□□ -0.14
GMDS-201ENST00000380805 PPP1R17O96001 155 aa14.2□□□□□ -0.14
GMDS-201ENST00000380805 Q8N1Y9 231 aa14.2□□□□□ -0.14
GMDS-201ENST00000380805 IFI27L1Q96BM0 104 aa14.2□□□□□ -0.14
GMDS-201ENST00000380805 C2orf88Q9BSF0 95 aa14.2□□□□□ -0.14
GMDS-201ENST00000380805 SMIM2Q9BVW6 85 aa14.2□□□□□ -0.14
GMDS-201ENST00000380805 SETD2Q9BYW2 2564 aaPredicted RBP14.19□□□□□ -0.14
GMDS-201ENST00000380805 KNCNA6PVL3 124 aa14.19□□□□□ -0.14
GMDS-201ENST00000380805 HIST2H2BDQ6DRA6 164 aa14.19□□□□□ -0.14
GMDS-201ENST00000380805 JMJD8Q96S16 334 aa14.19□□□□□ -0.14
GMDS-201ENST00000380805 RBMY1BA6NDE4 496 aaKnown RBP14.18□□□□□ -0.14
GMDS-201ENST00000380805 RBMY1EA6NEQ0 496 aaKnown RBP14.18□□□□□ -0.14
GMDS-201ENST00000380805 RBMY1DP0C7P1 496 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms